ID FN396969; SV 1; circular; genomic DNA; STD; VRL; 2736 BP. XX AC FN396969; XX DT 05-JUN-2009 (Rel. 101, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 2) XX DE Ramie mosaic virus complete DNA-A genome, isolate J4 XX KW complete genome. XX OS Ramie mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2736 RA Zhou X.P.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Li J., Qian Y.; RT "Molecular Characterization of Ramie mosaic virus in China"; RL Unpublished. XX DR MD5; 6d5b6017c89c9f072843100fe22534ec. DR BioSample; SAMEA3283094. XX FH Key Location/Qualifiers FH FT source 1..2736 FT /organism="Ramie mosaic virus" FT /mol_type="genomic DNA" FT /country="China:Jiangsu province" FT /lat_lon="31.21 N 119.49 E" FT /isolation_source="ramie" FT /collected_by="Xue-ping Zhou" FT /collection_date="11-May-2008" FT /db_xref="taxon:486809" FT CDS 132..500 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:C5J9J3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C5J9J3" FT /protein_id="CAZ40072.1" FT /translation="MWDPLVNDFPDTVHALRCMLAIKYCQLVANTYDPDTVGYDLIRDL FT ILVIRARNYVEASRRYSNFNSRLQSTPPAEFRQSRDQPCRCPHCPRHKQKAGLDVQAHV FT SEAQDVQDVQKPRCSSWV" FT CDS 292..1065 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C5J9J4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C5J9J4" FT /protein_id="CAZ40073.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPGISRAAAPTVLVTNRRRAW FT TYRPMYRKPKMYRMFKSPDVPRGCEGPCKVQSFEARHDIAHTGKVICISDVTRGGGLTH FT RTGKRFCVKSVYVLGKIWMDENVKVKNHTNTAMFFVVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDLRDRFQVIRRFTSTVTGGQYASKEQALVKKYMKVNAHVVYNHQEAGKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1062..1466) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:C5J9J5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5J9J5" FT /protein_id="CAZ40074.1" FT /translation="MDSRTGEPITATQAENGVYTWMVRNPLYFKIIRHDVNVFLTRKDI FT ITIQIQFNHNLRKALGIHQCFLTCRIWTRLRPQTWRFLSVFRYQCMKYLNNLGLISINN FT VVRAIRYVLYNVLDGTIDAELSHLIKFNLY" FT CDS complement(1207..1641) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:C5J9J6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5J9J6" FT /protein_id="CAZ40075.1" FT /translation="MHLSKGGHYKMLNSSSSPKRSTQVPIKVQHKIAKKAIRRRRVDLP FT CGCTYYFAIECASHGFTHRGTHHCNSGREWRLYLDGQKSPIFQDHPPRRECIPDKEGHH FT HNPDPVQPQPEESVGDSPVFSDLPDLDSFTSSDLAFLKCI" FT CDS complement(1514..2599) FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:C5J9J7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5J9J7" FT /protein_id="CAZ40076.1" FT /translation="MAPPRRFAINAKNYFLTYPQCPLSKEEALSQLLNLSTPTNKKFIK FT ICRELHEDGSPHLHVLIQFEGKYKCQNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYM FT EKDGDTTEWGAFQIDGRSARGGQQTANDAYAQAINSGSKLLALNVIKELAPKDYVLQFH FT NLNANLDKIFAPPLEVFNCPFLSSSFDQVPEEIECWVADNIKDAAARPWRPISIVIEGE FT SRTGKTMWARSLGPHNYLCGHLDLSPRVYNNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEERNASLKRWALQNAKFFFISEAL FT YSSTHQGPTQNSQEGYSQTES" FT CDS complement(2245..2442) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5J9J8" FT /protein_id="CAZ40077.1" FT /translation="MGALTSMFSFNSRANTNARITDSSTWYPQPGQHISIRTFKELNPA FT PMSSHIWRRTGIPLNGERFK" XX SQ Sequence 2736 BP; 721 A; 584 C; 627 G; 804 T; 0 other; accggatggc cgcgattttt tttaaagtgg tcccaccacg cactgctgtc ccccactcag 60 gacgctccct cacagcttat ttagtgcgtg gtccccttta aatcacttgt tcaccaagtt 120 gtaggcgcaa gatgtgggat ccattggtaa atgattttcc agatactgta cacgctctgc 180 gttgtatgct agctataaaa tactgtcagc ttgtagcaaa tacctacgat ccagatacgg 240 tgggatacga tctcatacgt gatttgatac ttgttatacg tgcacgtaat tatgtcgaag 300 cgtcccgccg atatagtaat ttcaactccc gcctccaaag tacgccgccg gctgaatttc 360 gacagtcccg ggatcagccg tgccgctgcc cccactgtcc tcgtcacaaa cagaaggcgg 420 gcttggacgt acaggcccat gtatcggaag cccaagatgt acaggatgtt caaaagccca 480 gatgttcctc gtgggtgtga aggcccatgt aaagtccagt cttttgaagc ccgtcatgac 540 atagcccata ctggtaaagt tatttgtatt tcagatgtca ctcgtggtgg tgggctgacc 600 caccgaacag gcaagaggtt ctgcgtaaag tccgtttacg ttttgggtaa gatctggatg 660 gatgagaatg tcaaggttaa aaaccataca aatacagcca tgttttttgt tgttcgagac 720 aggaggccat atggaactcc acaagatttt ggccaggtgt tcaacatgta tgacaatgag 780 cccagtactg ccactgtgaa gaacgatctt agagatcgtt ttcaagttat acgtcgtttt 840 acttcaactg tcactggagg tcagtatgcg agcaaggaac aagccctggt caagaagtat 900 atgaaggtta atgctcatgt ggtttataac caccaagaag ctgggaagta cgagaaccat 960 actgagaatg ctttattatt gtatatggca tgtactcatg ctagtaatcc agtgtatgca 1020 actttgaaaa tcaggatcta tttttatgat tctgtcagca attaataaag attgaatttt 1080 attaaatgtg ataactcagc atcaattgtg ccgtcaagta cattgtacaa tacatatcta 1140 atggctctaa caacattgtt gatactaatg agccctaaat tatttaaata cttcatacat 1200 tgatatctaa atacacttaa gaaacgccag gtctgaggac gtaaacgagt ccagatccgg 1260 caggtcagaa aacactggtg aatccccaac gctttcctca ggttgtggtt gaactggatc 1320 tggattgtga tgatgtcctt ccttgtcagg aatacattca cgtcgtggcg gatgatcttg 1380 aaatataggg gatttctgac catccaggta tagacgccat tctctgcctg agttgcagtg 1440 atgggttccc ctgtgcgtga atccatgcga agcgcactca attgcaaagt aatatgtgca 1500 cccgcaagga aggtcaactc tccgtctgcg aatagccttc ttggctattt tgtgttggac 1560 cttgatgggt acttgagtag agcgcttcgg agatgaagaa gaatttagca ttttgtaatg 1620 cccacctttt gagagatgca ttccgctcct cgtccaggta ctctttatag gacgaagttg 1680 ggcctggatt gcagaggaag atagtgggaa taccaccttt aatttgaatt ggtttcccgt 1740 atttggtgtt gctttgccag tccctttggg cccccatgaa ctctttaaag tgctttaagt 1800 agtgggggtc gacatcatca atcacgttgt accaagcatc attattatag actctcggac 1860 tgagatctaa atgaccacat agataattat gtggccccaa cgacctggcc cacattgttt 1920 tcccagtacg actctcgccc tcgatgacaa tgctaatggg tctccacggc cgcgcagcgg 1980 catctttgat gttatctgca acccagcatt caatctcctc tgggacttga tcaaaggacg 2040 atgataaaaa tggacaatta aacacctcta atgggggtgc aaatatttta tctaaatttg 2100 cgtttaaatt atgaaactgt aaaacataat ctttaggggc tagctcttta attacattaa 2160 gagccagtaa tttgctaccg ctgttaatgg cctgcgcgta agcgtcattg gctgtttgct 2220 gaccccctct tgcagatctg ccgtctattt gaaacgctcc ccattcagtg gtatccccgt 2280 ccttctccat atatgacttg acatcggagc tggatttagc tccttgaatg ttcggatgga 2340 aatgtgctga cctggttggg gataccaggt cgaagaatct gttattctgg catttgtatt 2400 tgccctcgaa ttgaatgaga acatggaggt gagggctccc atcttcgtga agctctctgc 2460 aaattttaat aaatttttta tttgttgggg ttgagaggtt taataattgg gaaagtgctt 2520 cctctttgga gagagggcac tgaggatacg tgaggaaata atttttagcg tttattgcga 2580 aacgcctggg aggtgccatt tgacttggtc aatcggggat caaccatcta tcccattcaa 2640 tcggggaatg gggatcaata tatacttgag accctaatgg cataattgta atttgtaaaa 2700 tatttgaaat ttcatcgcgg ccatccgttt aatatt 2736 //