ID FN396966; SV 1; circular; genomic DNA; STD; VRL; 2753 BP. XX AC FN396966; XX DT 05-JUN-2009 (Rel. 101, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 2) XX DE Clerodendrum golden mosaic Jiangsu virus complete DNA-A genome, isolate YX2 XX KW complete genome. XX OS Clerodendrum golden mosaic Jiangsu virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2753 RA Zhou X.P.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Li J., Zhou X.; RT "Molecular characterization of begomoviruses in Clerodendrum cyrtophyllum RT Turcz. in China"; RL Unpublished. XX DR MD5; f1656de8ebff6b91f618335bae56b016. DR BioSample; SAMEA3283093. XX FH Key Location/Qualifiers FH FT source 1..2753 FT /organism="Clerodendrum golden mosaic Jiangsu virus" FT /mol_type="genomic DNA" FT /country="China:Jiangsu province" FT /lat_lon="31.21 N 119.49 E" FT /isolation_source="Clerodendrum cyrtophyllum Turcz." FT /collected_by="Xue-ping Zhou" FT /collection_date="11-May-2008" FT /db_xref="taxon:649509" FT CDS 137..487 FT /transl_table=1 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:C5J9I3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C5J9I3" FT /protein_id="CAZ40062.1" FT /translation="MWDPLLNEFPETVHGFRCMLAIKYLQLVENTYSPDTLGYDLIRDL FT ILVIRAKNYVEASSRYSHFHARLQGASPSEFRQPLFQPCCCPHCPRHKQKEIMGSAAHV FT PEAQTVQNVQKP" FT CDS 297..1070 FT /transl_table=1 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C5J9I4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C5J9I4" FT /protein_id="CAZ40063.1" FT /translation="MSKRPADIVISTPASKVRRRLNFDSPYSSRAAAPTVLVTNRRRSW FT AQRPMYRKPKLYRMYRSPDVPKGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGGGITH FT RVGKRFCVKSVYVLGKVWMDENIKVKNHTNTVMFFVVRDRRPYGTPQDFGQVFNMYDNE FT PSTATVKNDMRDRFQVLRKFSSTVTGGQYASKEQALVRKFMKINNHVTYNHQEAAKYEN FT HTENAVLLYMACTHASNPVYATLKIRIYFYDSTMN" FT CDS complement(1067..1471) FT /transl_table=1 FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:C5J9I5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5J9I5" FT /protein_id="CAZ40064.1" FT /translation="MDSRTGEYITAAQATNGVHTWVIDNPLYFKILNHHKRPFNMNHDI FT IQIQVRFNHNLRKELGIHKCFLNLKIYTALHPQTSHFLRVFKTQVIKYLDRLGVISINN FT CIRAFTHVLTNVIEGTIDVIEAHDIKFIFY" FT CDS complement(1212..1610) FT /transl_table=1 FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:C5J9I6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5J9I6" FT /protein_id="CAZ40065.1" FT /translation="MQHSSPSRSHYTPIKVIHKQAKRPIRRKRIDLACGCSIYKSVDCE FT HHGFTHRGVHHCSSSDEWRTYMGYRQSPLFQDPKPPQETVQHEPRHHTNSSPIQPQPKE FT GVGDSQVFSQLEDLHSFTSSDIAFLKGI" FT CDS complement(1519..2598) FT /transl_table=1 FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:C5J9I7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5J9I7" FT /protein_id="CAZ40066.1" FT /translation="MPRAGRFSIKAKNYFLTYPHCSLTKEEALSQLQNLKTPTNKKFIK FT ICKELHEDGSPHLHVLVQFEGKYNCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDIKSYI FT DKDGDTLEWGEFQVDGRSARGGCQNANDACAEALNAGSKEAAMAIIREKLPKDYIFQFH FT NLNSNLDRIFAPPLEVYISPFLSSSFNQVPEELEEWVSENVRNAAARPWRPNSIVIKGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEFLDEEKNRALRDWAVKNATFVTLTEPL FT YSNQSDSQAGQETNSQEEN" FT CDS complement(2184..2441) FT /transl_table=1 FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5J9I8" FT /protein_id="CAZ40067.1" FT /translation="MGALISMCLCNSRENTTAQITDSSTWYPQPGQHISIRTFRELNPA FT PTSSPISTRMEIHSNGENFKSTAEVLEEAARMLTTHVRKH" XX SQ Sequence 2753 BP; 716 A; 550 C; 618 G; 869 T; 0 other; accggaaggc ccgcgccccc cttttttgtg ggccccgcgc acgttctttt tgtcgtccaa 60 tagaattggg ccctcaaagc ttagttaagt aattttgtcc tattaatacg tggtcttcct 120 ctttccacgt attaagatgt gggacccact cttgaatgag tttcccgaaa ccgtacacgg 180 ttttaggtgt atgctcgcga taaaatactt gcagctcgta gaaaatacgt attctccgga 240 tacgttgggg tacgatctta tacgcgatct tatacttgtg attcgtgcga agaattatgt 300 cgaagcgtcc agcagatata gtcatttcca cgcccgcctc caaggtgcgt cgccgtctga 360 atttcgacag cccttattcc agccgtgctg ctgcccccac tgtcctcgtc acaaacagaa 420 ggagatcatg ggctcagcgg cccatgtacc ggaagcccaa actgtacaga atgtacagaa 480 gccctgatgt tccaaaggga tgtgaaggcc catgtaaggt tcaatcattt gaacagcgac 540 atgatatagc ccatactggg aaggttattt gtatttccga tgttactagg ggaggtggta 600 ttacccatag ggttggtaag agattttgtg ttaagtccgt ttatgtctta ggtaaagtgt 660 ggatggatga aaatattaag gttaaaaacc acacaaatac agttatgttt tttgtagtta 720 gggatcgacg tccgtatggt actccacaag attttgggca ggtgtttaat atgtatgata 780 atgagcccag tactgctacc gtgaagaacg atatgaggga tcgtttccaa gtattgagga 840 agttttcgtc gactgttact ggtggtcaat atgcgtccaa ggaacaagct ttagtgagga 900 agtttatgaa gataaataat catgttacgt acaatcatca ggaagccgct aagtatgaga 960 atcatacgga gaatgctgtt ttattgtata tggcatgtac tcatgcctct aatcccgtgt 1020 atgctacttt gaaaattcgg atctatttct acgattcgac aatgaattaa taaaatataa 1080 attttatatc atgtgcttca attacatcaa ttgttccctc tattacattg gttaatacat 1140 gggtaaatgc cctaatacaa ttattgatac taatcactcc taatctatct aaatacttaa 1200 ttacttgggt tttaaatacc cttaagaaat gcgatgtctg aggatgtaaa gctgtgtaga 1260 tcttcaagtt gagaaaacac ttgtgaatcc ccaactcctt ccttaggttg tggttgaatc 1320 ggacttgaat ttgtatgatg tcgtggttca tgttgaacgg tctcttgtgg tggtttagga 1380 tcttgaaata gaggggattg tctataaccc atgtatgtac gccattcgtc gcttgagctg 1440 cagtgatgta ctcccctgtg cgtgaatcca tggtgttcgc agtccactga tttgtatatg 1500 gaacacccgc aagctaggtc aattctcttc ctgcgaattg gtctcttggc ctgcttgtga 1560 atcactttga ttggagtata atggctccgt gagggtgacg aatgttgcat tttttactgc 1620 ccagtctctt aaagctctat ttttctcttc atccaagaat tctttatatg atgagtttgg 1680 tcctggattg cagaggaaga tagtgggaat accaccttta atttgaattg gtttcccgta 1740 ctttgtgttt gactgccagt ccctctgggc tcccatgaat tccttaaagt gctttagata 1800 gtggggatca acgtcatcaa tgacgttgta ccacgcgtca tttgaatata ccttggggct 1860 caagtctagg tgtccacaca aataattgtg tggacccaga gacctggccc acatagtctt 1920 gccagtacga ctatccccct ttatcacaat actattcggt ctccatggcc gcgcagcggc 1980 attcctaaca ttctcggaca cccactcctc aagttcctca ggaacttggt taaatgaaga 2040 agaaagaaaa ggagaaatat aaacctccaa gggaggtgca aaaatcctat ctaaattact 2100 atttaaatta tgaaattgaa aaatataatc ttttgggagt ttttccctta ttatagccat 2160 ggcagcctct ttggaacctg cgtttaatgc ttccgcacat gcgtcgttag cattctggca 2220 gcctcctcta gcacttctgc cgtcgacttg aaattctccc cattcgagtg tatctccatc 2280 cttgtcgata taggacttga tgtcggagct ggatttagct ccctgaatgt tcggatggaa 2340 atgtgctgac ctggttgggg ataccaggtc gaagaatctg ttatttgtgc agttgtattt 2400 tccctcgaat tgcacaagca catggagatg agggctccca tcttcgtgta attctttgca 2460 gattttaatg aattttttat ttgtgggagt ttttaggttt tgtaattggg aaagtgcttc 2520 ctctttggtg agagagcagt gtggatatgt tagaaaatag tttttggctt taatagaaaa 2580 tctacctgca cgaggcattt tggaattggg gggcactcaa agtctgagga atcgggggaa 2640 ctggggggca atatatagtg ccccccaaat ggcataatgg taatttggta aagatacttt 2700 ctttaattca aaattcaaaa ttcgaatagt aggcgggcct tccttctaat att 2753 //