ID FN396962; SV 1; circular; genomic DNA; STD; VRL; 2775 BP. XX AC FN396962; XX DT 05-JUN-2009 (Rel. 101, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 2) XX DE Clerodendrum golden mosaic China virus complete DNA-A genome, isolate YX1 XX KW complete genome. XX OS Clerodendrum golden mosaic China virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2775 RA Zhou X.P.; RT ; RL Submitted (31-MAY-2009) to the INSDC. RL Zhou X.P., Zhejiang University, Institute of Biotechnology, NO. 268, RL Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA. XX RN [2] RA Li J., Zhou X.; RT "Molecular characterization of begomoviruses in Clerodendrum cyrtophyllum RT Turcz. in China"; RL Unpublished. XX DR MD5; 1db491a5b86535fcfdd5eb4152403d19. DR BioSample; SAMEA3283092. XX FH Key Location/Qualifiers FH FT source 1..2775 FT /organism="Clerodendrum golden mosaic China virus" FT /mol_type="genomic DNA" FT /country="China:Jiangsu province" FT /lat_lon="31.21 N 119.49 E" FT /isolation_source="Clerodendrum cyrtophyllum Turcz." FT /collected_by="Xue-ping Zhou" FT /collection_date="11-May-2008" FT /db_xref="taxon:559878" FT CDS 101..478 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:C5J9H2" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C5J9H2" FT /protein_id="CAZ40050.1" FT /translation="MLTGHTCMSDMWDPLVNEFPETVHGLRCMLAVKYLKYVENTYSPD FT TLGYDLIRDLVLVIRAKNYGEATRRYNHFHARLQGSTEVELRQPVSEPCACPHCPRHTK FT TVMGQQAHVSEAQTIPSVPGP" FT CDS 291..1061 FT /gene="AV1" FT /product="coat protein" FT /db_xref="GOA:C5J9H3" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:C5J9H3" FT /protein_id="CAZ40051.1" FT /translation="MAKRPGDIIISTPVSKVRRRLNFDSPYQSRVPALTARGTRKQLWA FT NRPMYRKPRLYRVFRGPDVPRGCEGPCKVQSFEQRHDIAHTGKVICISDVTRGNGITHR FT VGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFYVVRDRRPYGTPMDFGQVFNMYDNEP FT STATIKNDLRDRFQVIRKFYSTVTGGQYASKEQALVKKFMRVNNHVVYNHQEAAKYENH FT TENALLLYMAGTHASNPVYATLKIRIYFYDSVSN" FT CDS complement(1058..1462) FT /gene="AC3" FT /product="AC3 protein" FT /db_xref="GOA:C5J9H4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5J9H4" FT /protein_id="CAZ40052.1" FT /translation="MDSRTGEIITATQAESGVFIWEVPNPLYFKITEHDSKPFNMNHDI FT ITVQIQFNHNLRKALGLHKCFLTFRIWTRLTPPTGRFLRVFRSECCKYLNNLGVISINN FT VIRTVTHVLNDVIEGTLDVIEKHSIKFKVY" FT CDS complement(1203..1610) FT /gene="AC2" FT /product="AC2 protein" FT /db_xref="GOA:C5J9H5" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5J9H5" FT /protein_id="CAZ40053.1" FT /translation="MLNSSPSQSHSSQVPIKVQHKISKRRPTRRRRVDLECGCSYYLSI FT DCHNHGFTHRGNHHCNSGGEWRFYLGGAKSPLFQNNGTRLEAIQHESRHNHRPDTIQPQ FT PEESTGTSQMLPHISNLDTFDSADWEIFKGF" FT CDS complement(1510..2598) FT /gene="AC1" FT /product="replication protein" FT /db_xref="GOA:C5J9H6" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5J9H6" FT /protein_id="CAZ40054.1" FT /translation="MAPPRRSRVSAKNYFLTYPHCSVTKDETLTQLRTINTPVNKKYIK FT VCRELHEDGSPHLHVLIQFEGKFVCTNNRLFDLVSPTRAAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGQFQIDGRSARGGQQSANDAYAQALNTGSKQDALRIIRELAPKDFILQFH FT NLSSNLDRIFAPEVPVYTSPYLSSSFNRVPEELEVWVSENVKSAAARPLRPKSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPTIFLCNPGPGASYIEFLNEEKQTALKNWALKNAEFVSLTEPL FT FSSPNQGPTQDFQEEANTTTES" FT CDS complement(2151..2441) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C5J9H1" FT /protein_id="CAZ40055.1" FT /translation="MGALISMCLYNSKANSSAQITDCSTWSPQPGQHISIRTYRELNPA FT PTSSHILIRTGTHWNGGSFRSTDDLQGAVNNQQTMLTPKRLTREVSRMLLG" XX SQ Sequence 2775 BP; 720 A; 576 C; 650 G; 829 T; 0 other; accgggtggc cgcgcttttt cgcttaaagt gggtcccgcg gaaaataatg gccaatcaga 60 tgagtccttt cgagcctaat agtcaaaagt tggcctataa atgttgaccg gtcatacatg 120 catgtcagac atgtgggatc cactagttaa tgaattccct gagactgtac atggtctcag 180 gtgtatgctt gctgtgaagt acctaaaata cgtagaaaat acgtattcac cggatacact 240 cggctacgat ttaattcgtg atctggtact tgttattcgt gccaaaaatt atggcgaagc 300 gacccggaga tataatcatt tccacgcccg tctccaaggt tcgacggagg ttgaacttcg 360 acagcccgta tcagagccgt gtgcctgccc tcactgcccg aggcacacga aaacagttat 420 gggccaacag gcccatgtat cggaagccca gactataccg agtgttccgg ggccctgatg 480 ttcccagggg atgtgaaggc ccatgtaagg tccaatcatt cgagcagagg catgacatag 540 cccataccgg gaaggtcatt tgtatttccg atgtaacacg tgggaatggt attacccatc 600 gtgttggtaa acgtttttgt gttaagtctg tttatgtatt gggtaaggtg tggatggatg 660 aaaatatcaa gactaagaat cacaccaata ctgttatgtt ctatgtggtt agggataggc 720 gcccctatgg tactccgatg gattttggcc aggtgtttaa tatgtatgac aacgagccaa 780 gcactgcgac catcaagaac gatcttaggg atcgtttcca agttatacgg aagttctatt 840 cgactgtgac cggtggtcag tacgcaagta aggagcaggc gcttgtgaag aaatttatga 900 gggttaataa tcatgttgtt tataaccatc aagaggccgc taagtatgag aatcatacgg 960 aaaatgcttt gctgttgtat atggcaggta cccatgcatc caatcccgtg tatgctacgt 1020 tgaaaatacg tatctatttc tatgattctg tatcaaatta ataaactttg aattttattg 1080 agtgtttttc gattacatcc aaagtccctt caattacatc attcagtaca tgcgtgactg 1140 ttctaattac attgttgatc gaaataacac ctaaattatt caagtacttg caacattcac 1200 tcctaaaaac ccttaaaaat ctcccagtcg gcggagtcaa acgtgtccag attcgaaatg 1260 tgaggaagca tttgtgaagt cccagtgctt tcctcaggtt gtggttgaat tgtatctgga 1320 cggtgattat gtcgtgattc atgttgaatg gcttcgagtc gtgttccgtt attttgaaat 1380 agaggggatt tggcacctcc cagataaaaa cgccactctc cgcctgagtt gcagtgatga 1440 tttcccctgt gcgtgaatcc atggttgtgg cagtcgatcg atagataata tgagcaacca 1500 cactcgaggt caactctccg tcgtcgtgtt ggcctcctct tggaaatctt gtgttggacc 1560 ttgattggga cttgagaaga gtggctctgt gagggagacg aattcagcat tctttaaagc 1620 ccagttcttg agtgctgttt gtttttcctc gtttaaaaac tctatgtagc tggcacctgg 1680 tcccggattg cagagaaaga tagtgggaat cccaccttta atttgaactg gctttccgta 1740 ttttgtgttg ctttgccagt ccctctgggc ccccatgaat tctttaaagt gcttcagata 1800 atggggatca acgtcatcaa tgacgttgta ccacgcgtcg ttgctgtaaa ccttgggact 1860 caagtctagg tgaccacata aataattgtg tggtccaaga gatctggccc acattgtctt 1920 tcctgtacga ctatcgccct cgataacaat tgatttaggt cttaatggcc gcgcagcggc 1980 actcttgaca ttttctgaaa cccatacttc gagttcctca ggaactcggt tgaaagaaga 2040 agaaagatac ggtgacgtat aaacaggcac ctctggtgcg aagatcctat ctaaatttga 2100 acttaaatta tgaaactgta aaataaaatc ttttggggct aattccctaa ttatcctaag 2160 agcatcctgc ttacttcccg tgttaagcgc ttgggcgtaa gcatcgtttg ctgattgttg 2220 accgcccctt gcagatcgtc cgtcgatctg aaactgcccc cattccagtg tgtccccgtc 2280 cttatcaata tatgacttga cgtcggagct ggatttagct ccctgtatgt tcggatggaa 2340 atgtgctgcc ctggttgggg agaccaggtc gaacaatctg ttatttgtgc agacgaattt 2400 gccttcgaat tgtataagca catggagatg agggctccca tcttcgtgca gctctctgca 2460 gactttgata tatttcttat tgactggagt atttatggta cgaagttgtg ttagtgtttc 2520 gtctttggtg acggagcaat ggggataagt gaggaaataa tttttggcag aaactctaga 2580 acgacgtgga ggagccatta aaattgtcgt tttggtatcg gtgacaacaa actctgtgga 2640 atgaattggt gactggtgta caatatatac cttgtcacct aatggcatat tcgtaaatat 2700 ccatacaact tttgaatttg aatttgaatt ttgaattaat ttcggctcca aaagcggcca 2760 cccgttacta atatt 2775 //