ID FN386614; SV 1; linear; genomic RNA; STD; VRL; 3006 BP. XX AC FN386614; XX DT 02-SEP-2009 (Rel. 102, Created) DT 07-MAR-2015 (Rel. 124, Last updated, Version 3) XX DE Beet soil-borne virus segment RNA-3, complete sequence, clone pUBS-3-wt, DE genomic RNA, XX KW . XX OS Beet soil-borne virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-3006 RA Crutzen F.; RT ; RL Submitted (28-APR-2009) to the INSDC. RL Crutzen F., Phytopathologie (FYMY), Universite catholique de Louvain (UCL), RL Louvain la Neuve, Place croix du Sud 2, bte 3, 1348, BELGIUM. XX RN [2] RX DOI; 10.1099/vir.0.014548-0. RX PUBMED; 19726609. RA Crutzen F., Mehrvar M., Gilmer D., Bragard C.; RT "A full-length infectious clone of beet soil-borne virus indicates the RT dispensability of the RNA-2 for virus survival in planta and symptom RT expression on Chenopodium quinoa leaves"; RL J. Gen. Virol. 90(Pt 12):3051-3056(2009). XX DR MD5; 8b9f4d9c7f9081c547bc9d455699b982. DR BioSample; SAMEA3283091. DR RFAM; RF00233; Tymo_tRNA-like. XX FH Key Location/Qualifiers FH FT source 1..3006 FT /organism="Beet soil-borne virus" FT /segment="RNA-3" FT /host="Beta vulgaris subsp. vulgaris" FT /mol_type="genomic RNA" FT /clone="pUBS-3-wt" FT /db_xref="taxon:46436" FT 5'UTR 1..405 FT CDS 406..1689 FT /gene="tgbp1" FT /product="putative 48K protein" FT /function="putative cell to cell movement" FT /db_xref="GOA:C7U0R8" FT /db_xref="InterPro:IPR003593" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C7U0R8" FT /protein_id="CAY39853.1" FT /translation="MEKEKLQKKEKNLNRRTNKKGVRRSDKKNSERKTKEDNRKLVEED FT VADDLVAHESVAKDRAATCERGESQRQRADQETSVKEGAGVDSKLGSDRYAGKRQLEVV FT SRICQESGFVATGKPLKRYPEDYFLKSGLLADFDKYLSDRLDKGCNLTKSETETVLKHL FT RQKRRPQSFLAGSVTGVPGSGKTTLLRKIQTEAGLNSVVILANERHKIRFTQLPACYTA FT KEILLLRTAIKYDVLLIDEYTLLQNGEILLLQRILEAKVVVLFGDRAQGNSRTADSPEW FT LQIPVIYSSVKSRRFGKATADFCGKQGFDFEGCDQEDEVQKLDFEGSSPETDINLALTE FT ATIEDLKEVGIECSLVKDVQGNEYDSVSLFIREEDRAALSDPELRSVAFTRHRKLLIVR FT IPVCLMLSLFNGELNSDYRPQTNHYGKN" FT CDS 1676..2026 FT /gene="tgbp2" FT /product="putative 13K protein" FT /function="putative cell to cell movement" FT /db_xref="GOA:C7U0R9" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:C7U0R9" FT /protein_id="CAY39854.1" FT /translation="MVRTNEIGARPNKYWPIVVGVIAIALFSFLTITNQKHATESGDNI FT HKFSNGGKFQDGNKRVHYNKNNPRAYNGSSSNNTFSKLLLPGLFLAAIMYAYVQYRKPQ FT CTVTCRGECARV" FT CDS 1890..2462 FT /gene="tgbp3" FT /product="putative 22K protein" FT /function="putative cell to cell movement" FT /db_xref="GOA:C7U0S0" FT /db_xref="InterPro:IPR007617" FT /db_xref="UniProtKB/TrEMBL:C7U0S0" FT /protein_id="CAY39855.1" FT /translation="MDPPAIIHSQNCCCPDCSWQPSCTHTSNTESLNARSPVEENARAF FT KGYSTDYVIMCVLVSVSLGFAIAAYFYSSGGHYDPDAAIFRQDLNEVQINFGKHPIDPK FT VIEAVHHWQHAPFGRFQGESVDVSKDFFKDSVDEDDEEERAEMNKEEVTKKKSKVAVCN FT RLCSIRNSLLRLFWTITLIMIVVKCRS" FT 3'UTR 2463..3006 XX SQ Sequence 3006 BP; 917 A; 519 C; 660 G; 910 T; 0 other; ggtatttttt tttcttgccg atcgcttgtg atcaattaga aaaaacttat cataaataat 60 cttgtatggg tacatatcag ccggtttttg ccaattgttt gtaccttata ctttggatta 120 ttttaataaa aacactatta gacgtgtttc ttcaatttga aatttttgaa ttcgaataat 180 ttattcttag gtgtcctttt cttcttacaa gtcaccgctt tttggcatcg acttgctaga 240 agtttggaaa acttttaaga ttgttttatt cggtttcggg acctcaattt gaagtttttc 300 gtttcatatc gcaaaagtaa aactcaagct agtaaaaaac ttttcttatc accgtttctt 360 gacacagatt cgataagttt atattatttt gcgttttact tatttatgga aaaggagaag 420 ttacagaaga aggagaaaaa tcttaatcgc aggactaaca aaaagggggt caggcgctca 480 gataagaaaa actccgaaag gaaaactaag gaagacaacc gtaagttagt agaggaagac 540 gttgcggacg atcttgtggc acacgagagt gttgcgaaag atcgtgcggc tacttgcgag 600 aggggcgagt cacagcgaca acgtgccgat caggagactt cagttaaaga aggagctggt 660 gtggattcta aactaggttc cgacagatac gcaggtaaga gacaacttga agttgtgtcg 720 cgaatttgtc aggaaagtgg ttttgttgca accggaaaac cgttaaaacg ctatccagaa 780 gattatttct tgaaatccgg cttattggcc gacttcgata aatacttaag tgataggttg 840 gacaaaggct gcaatttaac caagtcagaa acggaaacag ttctcaagca cctgcgacag 900 aaaaggagac ctcagtcttt tcttgctgga agtgttaccg gcgtacctgg tagtggaaaa 960 accactttgc tcagaaaaat tcaaaccgaa gcgggtttga actccgttgt tatattggct 1020 aacgagcgtc acaaaatacg ttttacacag ttgcctgcct gttatacagc taaagaaata 1080 ttgttgttga gaacggcaat taagtacgat gttttgttaa tagacgagta tacgttgtta 1140 cagaacggtg aaattctgtt actgcaacgt atactagaag cgaaagtagt ggtgctattt 1200 ggtgacagag cgcaaggcaa ctcccgtact gcggatagtc cagagtggtt gcagattcca 1260 gttatctact cttctgttaa gagtagacgt tttggaaagg ccaccgcgga tttttgcggc 1320 aaacagggtt ttgattttga aggttgtgac caggaggacg aagtgcagaa attagatttc 1380 gaaggatcgt cacctgagac agacatcaat ttagcgctca ccgaagctac tatcgaggat 1440 ttaaaagaag ttgggataga gtgttctttg gttaaagacg ttcaaggcaa cgaatacgat 1500 tccgtatctc tcttcatcag agaagaggat cgtgcggcac tatccgatcc ggagttaaga 1560 agcgttgcgt ttacgaggca tagaaagctg ctaatagttc gtatccccgt ttgtttaatg 1620 ctttcactgt ttaacggtga gttgaattcg gactatcgac cgcaaaccaa ccattatggt 1680 aagaactaat gagatcggcg ccagacctaa taagtattgg ccaattgtcg taggtgtaat 1740 tgcaattgcg ttgttcagtt ttttaactat aactaatcag aaacacgcca cagagtcggg 1800 agataatatc cacaagtttt caaacggtgg aaaatttcaa gacggcaata agcgtgttca 1860 ttataataag aataatccta gagcttataa tggatcctcc agcaataata cattctcaaa 1920 actgttgttg cccggattgt tcttggcagc catcatgtac gcatacgtcc aataccgaaa 1980 gcctcaatgc acggtcacct gtagaggaga atgcgcgcgc gtttaaaggt tacagtactg 2040 actatgttat catgtgtgtg ttagtgagtg tatctttagg tttcgcaatc gcagcatatt 2100 tttattcatc gggagggcat tacgatcctg acgcggcaat ctttagacaa gatttaaatg 2160 aagttcaaat caacttcgga aagcatccaa ttgacccgaa agtgattgaa gcagtccatc 2220 attggcaaca tgctcctttc ggacgttttc aaggtgaaag cgtggatgtg agtaaagact 2280 tttttaaaga ttccgtagat gaagatgatg aagaggaacg tgccgagatg aataaagaag 2340 aagtaacgaa gaaaaaatct aaggttgctg tatgtaatcg cttgtgttct attaggaata 2400 gcttattaag gttattttgg acaatcacct taataatgat agtggttaag tgtcgttcct 2460 aagtttttct ttttaaagtt ttaaactttt ctttctcttt cgacgactca gaaaattcaa 2520 aatgattaat cgtactgatc atgcgacgcg gattatgcga aaataattag taatgcgcgc 2580 taattacttt aaaatgtagc gcaactttat gtgaaatata caaatttttc tgtttattta 2640 acgttaggaa gatatgaaat ctcccataac tatgttatgg tttctcgcat atccttttaa 2700 cgctaacttt atagaaacgt ttgtatgttt ttgtttaagc tataaataaa gtagcttgta 2760 tcggtgtgcg gtaataataa agtttttctc aaacttataa atgagacgtg gcgaatacga 2820 taattcgtag tgtttgtgga taacacttta attaagattc atattgcggt ccgcagtcat 2880 tactaagata attacaaaaa acttagtatc tgacctatgc ggatgagacg agttagtctc 2940 gaccattttc acacaatggt tctgaggggt gcaactcccc cccttaacta gagggaaatc 3000 tagccc 3006 //