Dbfetch

Dbfetch

ID   FN293169; SV 1; linear; genomic DNA; STD; VRL; 541 BP.
XX
AC   FN293169;
XX
DT   23-MAR-2009 (Rel. 100, Created)
DT   23-MAR-2009 (Rel. 100, Last updated, Version 1)
XX
DE   Tomato yellow leaf curl virus ZJCX4 AV2 gene and partial AV1 gene for coat
DE   protein, isolate ZJCX4
XX
KW   .
XX
OS   Tomato yellow leaf curl virus ZJCX4
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-541
RA   Zhou X.P.;
RT   ;
RL   Submitted (22-MAR-2009) to the INSDC.
RL   Zhou X.P., Zhejiang university, Institute of biotechnology, No.268, Kaixuan
RL   Road, Hangzhou, Zhejiang, 310029, CHINA.
XX
RN   [2]
RA   Zhang H., Zhou X.P.;
RT   "Molecular characterization and pathogenicity of Tomato yellow leaf curl
RT   virus in China";
RL   Unpublished.
XX
DR   MD5; 1ed1375e62cc2514b20bf68564df8dc6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..541
FT                   /organism="Tomato yellow leaf curl virus ZJCX4"
FT                   /isolate="ZJCX4"
FT                   /mol_type="genomic DNA"
FT                   /country="China:zhejiang province"
FT                   /lat_lon="30 N 121 E"
FT                   /isolation_source="tomato"
FT                   /collected_by="Hui Zhang"
FT                   /collection_date="20-Mar-2008"
FT                   /db_xref="taxon:629706"
FT   CDS             155..505
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /db_xref="GOA:C0MQL8"
FT                   /db_xref="InterPro:IPR002511"
FT                   /db_xref="InterPro:IPR005159"
FT                   /db_xref="UniProtKB/TrEMBL:C0MQL8"
FT                   /protein_id="CAX63213.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLAIKYLQSVEETYEPNTLGHDLIRDL
FT                   ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQATIMDVQAHV
FT                   PEAQNIQNVSKP"
FT   CDS             315..>541
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /db_xref="GOA:C0MQL9"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:C0MQL9"
FT                   /protein_id="CAX63214.1"
FT                   /translation="MSKRPGDIIISTPASKVRRRLNFDSPYSSRAAVPIVQGTNKRRSW
FT                   TYRPMYRKPRIYRMYRSPDVPRGCEGPCKV"
XX
SQ   Sequence 541 BP; 140 A; 134 C; 117 G; 150 T; 0 other;
     taatattacc tgatggccgc gccttttctt tttatgtggt ccccacaagg gttccacaga        60
     cgtcactgtc aaccaatcaa attgcatcct caaacgttag ataagtgttc atttgtcttt       120
     atatacttgg tccccaagta gtctgtcttg caatatgtgg gatccacttc taaatgaatt       180
     tcctgaatct gttcacggat ttcgttgtat gttagctatt aaatatttgc agtccgttga       240
     ggaaacttac gagcccaata cattgggcca cgatttaatt agggatctta tatctgttgt       300
     aagggcccgt gactatgtcg aagcgaccag gcgatataat catttccacg cccgcctcga       360
     aggttcgccg aaggctgaac ttcgacagcc catacagcag ccgtgctgct gtccccattg       420
     tccaaggcac aaacaagcga cgatcatgga cgtacaggcc catgtaccgg aagcccagaa       480
     tatacagaat gtatcgaagc cctgatgttc ctcgtggatg tgaaggccca tgcaaagtcc       540
     a                                                                       541
//