ID   FN179153; SV 1; linear; genomic RNA; STD; VRL; 1793 BP.
XX
AC   FN179153;
XX
DT   25-FEB-2009 (Rel. 99, Created)
DT   25-FEB-2009 (Rel. 99, Last updated, Version 1)
XX
DE   Plum pox virus partial gene for polyprotein and 3'UTR, genomic RNA, strain
DE   Rec, isolate PPV-Godollo2
XX
KW   .
XX
OS   Plum pox virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1793
RA   Palkovics L.;
RT   ;
RL   Submitted (25-FEB-2009) to the INSDC.
RL   Palkovics L., Plant Pathology, Corvinus University of Budapest, Menesi Road
RL   44., H-1118, HUNGARY.
XX
RN   [2]
RA   Szathmary E., Palkovics L.;
RT   "Natural deletion is not unique in the coat protein (CP) of recombinant
RT   Plum pox virus (PPV) isolates in Hungary";
RL   Unpublished.
XX
DR   MD5; 028e193f375e7ad12439ea6e31aa0220.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1793
FT                   /organism="Plum pox virus"
FT                   /host="Prunus armeniaca"
FT                   /lab_host="Nicotiana benthamiana"
FT                   /strain="Rec"
FT                   /isolate="PPV-Godollo2"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Godollo"
FT                   /collection_date="2008"
FT                   /identified_by="Erzsebet Szathmary"
FT                   /clone="B631.1.1"
FT                   /PCR_primers="fwd_name: Poty7941, fwd_seq:
FT                   ggaattcccgcggnaayaayagyggncarcc, rev_name: PolyT2, rev_seq:
FT                   cggggatcctcgagaagcttttttttttttttttt"
FT                   /db_xref="taxon:12211"
FT   CDS             <1..1576
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C0MP67"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:C0MP67"
FT                   /protein_id="CAX51130.1"
FT                   /translation="STVVDNTLMVILAMTYSLLKLGYHPDTHDCICRYFVNGDDLVLAV
FT                   HPAYESIYDELQEHFSQLGLNYTFATKTENKEELWFMSHKGVLYDGMYIPKLEPERIVS
FT                   ILEWDRSNEPIHRLEAICASMVEAWGYKELLREIRKFYSWVLEQAPYNALSKDGKAPYI
FT                   AETALKKLYTDSEASETEIERYLEAFYNDIDDSLDSNIVIHQADEKEDDEEVDAGKPTV
FT                   VTAPAATVATTQPAPVIQPAIQTTTPMFNPIFTPATTQPATQSFGVYGNEGASPSTSNT
FT                   LVNTGRDRDVDAGSIGTFAVPRLKTMTSKLSLPKVKGKAIMNLNHLAHYSPAQVDLSNT
FT                   RAPQSCFQTWYEGVKRDYDVTDEEMSIILNGLMVWCIENGTSPNINGMWVMMDGETQVE
FT                   YPIKPLLDHAKPTFRQIMAHFSNVAEAYIEKRNYEKAYMPRYGIQRNLTDYSLARYAFD
FT                   FYEMTSTTPVRAREAHIQMKAAALRNVQNRLFGLDGNVGTQEEDTERHTAGDVNRNMHN
FT                   LLGVRGV"
FT   mat_peptide     <1..616
FT                   /product="nuclear inclusion protein, NIb"
FT   mat_peptide     617..1573
FT                   /product="coat protein, CP"
FT   3'UTR           1577..1793
XX
SQ   Sequence 1793 BP; 540 A; 374 C; 419 G; 460 T; 0 other;
     ttcgacagtt gttgacaata cactcatggt tattttggca atgacatatt cactcctgaa        60
     gcttggatac catccggata cacacgattg catttgtcgg tacttcgtga atggtgatga       120
     tcttgtcctc gcagtgcacc cagcatacga gagcatttat gatgagcttc aagagcactt       180
     ttcccaactt ggattgaatt acacattcgc cacaaagact gaaaacaagg aagagctgtg       240
     gtttatgtca cataaaggtg ttctctacga tggcatgtac attcccaagc tggagcctga       300
     gaggattgta tcaatacttg aatgggacag atcaaatgag ccaatccatc gattggaggc       360
     aatttgtgct tcaatggtgg aagcgtgggg ttataaggag ctgctgaggg agatccggaa       420
     attttacagt tgggttcttg aacaagcacc atataatgct ctttcaaaag atggaaaagc       480
     cccgtacata gcagagacgg cactcaagaa actctatact gattctgaag cgtctgagac       540
     ggaaattgag agatatcttg aagcatttta caatgatatt gatgatagcc ttgactccaa       600
     cattgttata caccaggctg atgaaaagga ggacgatgaa gaagtcgatg caggaaaacc       660
     cactgtagta actgcaccgg cagcaactgt ggcaacaact caaccagctc cagtgataca       720
     acctgcaatt caaaccacaa caccaatgtt caaccccatt ttcactccag caacaactca       780
     gcctgcgacg cagtcttttg gagtttatgg aaatgagggt gcatcaccta gcacatcaaa       840
     cactttggtg aacacaggaa gggataggga cgtcgatgca ggatcgattg gaactttcgc       900
     agtgccacgc ttaaaaacaa tgacatcgaa gttatctcta ccgaaggtga aaggaaaagc       960
     aattatgaac ttaaatcatt tggcacatta cagtcctgca caagttgatt tatcaaacac      1020
     acgagctcca caatcctgtt tccagacctg gtatgaagga gttaagcgtg attacgatgt      1080
     cacagatgag gaaatgagta tcattttgaa tggcctgatg gtttggtgca tcgaaaacgg      1140
     aacgtctcct aacatcaacg gaatgtgggt gatgatggat ggggagacac aagtggagta      1200
     tccaataaag ccattgttgg atcacgcgaa acccactttt agacaaatta tggcacattt      1260
     cagtaacgtg gctgaagcgt atattgaaaa acggaattac gagaaagcat acatgccaag      1320
     gtatggaatt cagcgcaacc tgacagatta cagcctcgcc agatacgcct ttgattttta      1380
     cgaaatgact tcaacaacgc ctgtgcgtgc acgtgaagct catatacaga tgaaggcagc      1440
     agcattgaga aatgttcaga atcgtttatt tggcttggat ggaaacgtcg gaacacaaga      1500
     agaggacaca gagagacaca ccgctggtga cgtgaatcgc aacatgcaca acctcctcgg      1560
     tgtgagggga gtgtagtggt ctcggtatct atcataaact ctacttgggt gagagtctag      1620
     tcacccaatt gtttttagat tcctgtaagc atccttttct ccgctttaat tgcggcacat      1680
     tcagtgaggt tgtacctcca catgtgttag tcttttattg tcgaacacag gcccttgtat      1740
     ctgatgtagc gagtgtttca ctccattcgg gttatagttc ttgtgcaaga gac             1793
//