ID   FM997912; SV 1; linear; genomic RNA; STD; VRL; 1742 BP.
XX
AC   FM997912;
XX
DT   19-AUG-2009 (Rel. 101, Created)
DT   19-AUG-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Yam chlorotic necrotic mosaic virus partial polyprotein gene, genomic RNA,
DE   isolate 3
XX
KW   .
XX
OS   Yam chlorotic necrotic mosaic virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1742
RA   Adams M.J.;
RT   ;
RL   Submitted (10-FEB-2009) to the INSDC.
RL   Adams M.J., Plant Pathology and Microbiology, Rothamsted Research, West
RL   Common, Herts., AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-009-0427-4.
RX   PUBMED; 19588222.
RA   Wang J.G., Zou X.J., Zheng H.Y., Adams M.J., Chen H.R., Chen J.P.;
RT   "Molecular characterization of a new macluravirus from yam in Yunnan,
RT   China";
RL   Arch. Virol. 154(8):1379-1380(2009).
XX
DR   MD5; 0327582a45735d3d40d0b77fe9d2691a.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1742
FT                   /organism="Yam chlorotic necrotic mosaic virus"
FT                   /host="Dioscorea zingbierensis"
FT                   /isolate="3"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan, Yongsheng county"
FT                   /note="virus is putative new member of the genus
FT                   Macluravirus, family Potyviridae"
FT                   /db_xref="taxon:596957"
FT   CDS             <1..1533
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="polyprotein"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C7TQE3"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:C7TQE3"
FT                   /protein_id="CAX36861.1"
FT                   /translation="GNNSGQPSTVVDNTLILMLSFLYAYIRKTGDTTCQHIDDRFKFVC
FT                   NGDDNKYSVSQDFHATFGGDFSKEIAELGLTYEFDDLTEDITLNPYTSLVMMRTPGGIG
FT                   FQLNPARIVSIVQWIKRGDVLQAAQAAFAAMIESFNDPWLFGILHLYLVWLICQYKDEI
FT                   RYAMDNNLGAVCYMDAYQVYALHYDTQEDVEHEKIGTHDAAQEFDEAQTNYVAPHINLQ
FT                   MDLTAPTSSTMLEASKSKGKEKVAEASGQRQSGEANQGTQPVEEPSNEPDTIDANDIEW
FT                   RIPAIGKGVEQYQVPRVKGKNVWNPRIIKKIAREQFTTTSQMVTQNQLEKWIEDVKRDL
FT                   ATTSNSDFYICLSSWCLWCANNGTSPELDTSQFMEIHANGQVTGVPIQIFVEPAILHGG
FT                   LRKVMRRFSKMTSRMLAEGGRMTSWGIKRGFTDRALIPYAFDFFVQTETTPKTIREQLN
FT                   QGKAAAIGRGTRRVMLLDGKIHGSRTSYERHTDGDQDEFEHGSLDDQRPALY"
FT   mat_peptide     <1..666
FT                   /product="NIb polymerase"
FT   mat_peptide     667..1530
FT                   /product="coat protein"
FT   3'UTR           1534..1742
XX
SQ   Sequence 1742 BP; 550 A; 328 C; 401 G; 463 T; 0 other;
     gggaataaca gcgggcagcc aagcacagtt gttgacaaca ccttaattct catgttatcc        60
     ttcttgtatg catacatcag gaaaactgga gacacgacat gtcagcacat tgatgatagg       120
     ttcaaattcg tttgcaacgg cgatgacaac aaatactctg tttcacagga ttttcatgca       180
     acatttggtg gagatttttc aaaggaaatt gcagagttgg gcttaacata tgaatttgac       240
     gacttaactg aggacataac gctgaatcct tacacgagtc tagtgatgat gagaacacca       300
     ggaggcatcg gttttcaatt aaatccagcc agaattgttt ccatcgtgca gtggattaag       360
     aggggtgatg ttttacaagc agctcaagca gcatttgctg ctatgattga atcttttaat       420
     gatccgtggc tatttggaat tttgcatctt tatcttgttt ggctcatttg tcaatataag       480
     gatgagattc gatacgcaat ggataacaat cttggggcag tgtgctacat ggatgcatat       540
     caagtttatg cgctacatta tgatacccag gaggatgttg aacatgaaaa gatcggaaca       600
     cacgatgcag ctcaagaatt tgatgaagcc cagacaaatt atgtcgctcc acacattaat       660
     ttacagatgg atctcacagc gccaacttca agcacaatgc tagaagcgag taagagcaaa       720
     gggaaagaaa aagttgccga agcatctgga cagcgacaaa gtggcgaagc caaccaagga       780
     actcaaccag ttgaagagcc aagtaacgaa ccagatacaa ttgatgctaa tgatattgaa       840
     tggagaatac cagcaattgg caaaggtgtt gagcaatatc aagtaccacg agttaaaggg       900
     aaaaacgtct ggaaccctcg tattatcaag aaaatagctc gtgagcaatt cacaacaaca       960
     tctcagatgg tgacacaaaa ccaacttgag aaatggattg aagatgtgaa gcgagatctc      1020
     gccacaacaa gcaactctga tttctacatt tgcctctcat catggtgcct gtggtgtgca      1080
     aacaacggaa catcaccaga attagacaca tcgcaattca tggaaattca cgcaaatggc      1140
     caagtgactg gtgtgccaat acagattttt gttgagccag ctattcttca tggcggttta      1200
     aggaaagtta tgcggcgctt cagtaaaatg acaagcagaa tgttggctga agggggaaga      1260
     atgacatcat ggggcatcaa aagaggtttc acggatcgcg ccttaattcc atatgctttc      1320
     gatttctttg ttcagactga aacgacaccg aaaacaattc gagaacagtt aaatcaagga      1380
     aaggctgcag caatcggtcg tggaacgcgt agagtcatgc tgttggatgg aaagatacat      1440
     gggagtcgaa caagttatga aaggcacact gatggtgatc aagatgagtt tgaacatgga      1500
     agtttggacg accagcgtcc agccttatat taatacaaga tgttatgaca aacacttgtt      1560
     attattagca tttaggtaaa tggttatctt ttctgcttta atttcatgat gtctatgagt      1620
     tcaacgggag tttttgtggg tttttcttcc gacgctcagc aaccctcaac atcttttgtt      1680
     attctaaact tgagctggag gctcagttgg gtttatcacc ttatcctgct ctgtagaaag      1740
     gg                                                                     1742
//