ID   FM997911; SV 1; linear; genomic RNA; STD; VRL; 1748 BP.
XX
AC   FM997911;
XX
DT   19-AUG-2009 (Rel. 101, Created)
DT   19-AUG-2009 (Rel. 101, Last updated, Version 1)
XX
DE   Yam chlorotic necrotic mosaic virus partial polyprotein gene, genomic RNA,
DE   isolate 2
XX
KW   .
XX
OS   Yam chlorotic necrotic mosaic virus
OC   Viruses; Riboviria; Potyviridae; Macluravirus.
XX
RN   [1]
RP   1-1748
RA   Adams M.J.;
RT   ;
RL   Submitted (10-FEB-2009) to the INSDC.
RL   Adams M.J., Plant Pathology and Microbiology, Rothamsted Research, West
RL   Common, Herts., AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1007/s00705-009-0427-4.
RX   PUBMED; 19588222.
RA   Wang J.G., Zou X.J., Zheng H.Y., Adams M.J., Chen H.R., Chen J.P.;
RT   "Molecular characterization of a new macluravirus from yam in Yunnan,
RT   China";
RL   Arch. Virol. 154(8):1379-1380(2009).
XX
DR   MD5; 6aa471034dec0eb0748e152639e4173f.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1748
FT                   /organism="Yam chlorotic necrotic mosaic virus"
FT                   /host="Dioscorea zingbierensis"
FT                   /isolate="2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan, Yongsheng county"
FT                   /note="virus is putative new member of the genus
FT                   Macluravirus, family Potyviridae"
FT                   /db_xref="taxon:596957"
FT   CDS             <1..1533
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /gene="polyprotein"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C7TQE2"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:C7TQE2"
FT                   /protein_id="CAX36860.1"
FT                   /translation="GNNSGQPSTVVDNTLILMLSFLYSYIRKTGDSTCQHIDDRFRFVC
FT                   NGDDNKYSVSREFNATFGGDFSREIAELGLTYEFDDLTEDITLNPYMSLVMIRTPGGIG
FT                   FQLNPARIVSIVQWIKRGDVLQAAQAAFAAMIESFNDPWLFGILHLYLVWLICQYKEEI
FT                   RYAMDNDLGAVCYMDAYQVYALHYDTQSDIRSDALQADSLDYKHQVPVVNPDIQHIDLQ
FT                   MDLTAPAQGVASEPASRKGKEKVSEAPRDRQDKEAQQGHQPVEEPSNDPDAVDTDDIEW
FT                   RIPAIGKGVSQYQIPRIKGKNVWNPRILKKIAHEQYGTTSQMVTTNQLEKWVEAVKRDL
FT                   ATTNDSDFYICLSSWCLWCANNGTSPELDASQFMEIHANGQVTGVPIQIFVEPAIINGG
FT                   LRKVMRRFSKMTSKMLAEGGRMTAWGIKRGFTDRALIPYAFDFYVQTDTTPKTIREQLN
FT                   QGKAAAIGRGTRRAMLLDGKIHGSRTSYERHTDGDQDEFEHGSLDDQRPALY"
FT   mat_peptide     <1..666
FT                   /product="NIb polymerase"
FT   mat_peptide     667..1530
FT                   /product="coat protein"
FT   3'UTR           1534..1748
XX
SQ   Sequence 1748 BP; 524 A; 336 C; 426 G; 462 T; 0 other;
     gggaataaca gcgggcagcc aagcacagtc gttgacaaca cgctgatcct catgctttca        60
     ttcctttatt catacatacg taaaactgga gattcaacat gtcagcacat tgatgatagg       120
     tttcgatttg tgtgcaatgg ggatgacaac aagtactctg tgtcccgaga gttcaacgca       180
     acatttggcg gagatttttc aagagagatt gcagagcttg gcttgacata tgagtttgat       240
     gatttaactg aggacataac gctaaatcca tacatgagtc ttgttatgat cagaacacct       300
     ggtggaattg gttttcagct gaacccagca agaatagtct caatcgtgca gtggattaag       360
     agaggagatg ttttacaagc agcacaggca gcttttgcag ccatgattga atcttttaac       420
     gatccgtggc tatttggaat cttgcacctc tacctcgtat ggttaatttg tcagtataaa       480
     gaggaaattc gatatgcaat ggataatgac ctcggtgcgg tttgttatat ggatgcctat       540
     caagtttatg cactgcatta cgacactcag agtgacattc gcagtgatgc attgcaagcg       600
     gatagtttgg attataaaca ccaggtacca gttgtaaatc cagacatcca gcacattgat       660
     cttcaaatgg atttaacagc gccagctcag ggtgtggcat cggaaccagc tagcaggaaa       720
     gggaaggaaa aggtctcaga agcaccaagg gatcgccaag acaaagaagc acagcaagga       780
     caccagccag ttgaggagcc aagcaatgat ccagatgctg tcgacacaga tgacattgaa       840
     tggagaatac cagcaattgg gaaaggtgtc agtcagtatc agataccgcg aatcaaagga       900
     aagaacgtct ggaatcctcg aatcctcaaa aagatagctc atgaacagta tggtacaaca       960
     tcacagatgg taacaacgaa ccaacttgaa aagtgggttg aagctgttaa acgagatctt      1020
     gccacaacaa acgactcaga tttttacatt tgcctgtcgt cgtggtgctt gtggtgcgcc      1080
     aacaatggga cttctccgga gcttgacgca tcccaattta tggaaattca tgcaaatggg      1140
     caagtgactg gtgttccaat tcagattttt gttgaacctg ctataatcaa tggtggtctc      1200
     aggaaagtga tgcggcgttt cagtaaaatg acaagcaaaa tgttggctga aggagggcga      1260
     atgactgcat ggggaattaa gagagggttt acggatcgag ctctaattcc ttacgccttt      1320
     gatttttatg tccaaacaga cacaacaccg aaaaccatcc gagagcagtt gaaccaagga      1380
     aaagcagcag caattgggcg tggaacacga agagccatgt tattagatgg aaagatacac      1440
     gggagccgga cgagctatga aaggcatact gatggtgatc aggacgagtt cgagcatgga      1500
     agtttggacg accagcgtcc agctttatat taatatgaga tgttgatttc aacactcatt      1560
     atttttagca cttaaagttc gcatcttctt taaatttgtt ttaagtttga tgatgcttat      1620
     gagttcaacg ggagtttttg tgggtttttc ttccgacgct cagcaaccct cagcatcttt      1680
     tgttttagtt taaacttgag ctggatgctc agttggatgt tacatcttat cctgctctgt      1740
     agaaaggg                                                               1748
//