ID   FM997894; SV 1; linear; genomic RNA; STD; VRL; 1819 BP.
XX
AC   FM997894;
XX
DT   19-MAY-2010 (Rel. 104, Created)
DT   19-MAY-2010 (Rel. 104, Last updated, Version 1)
XX
DE   Sugarcane mosaic virus partial polyprotein gene, genomic RNA, isolate YN7
XX
KW   .
XX
OS   Sugarcane mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1819
RA   Adams M.J.;
RT   ;
RL   Submitted (10-FEB-2009) to the INSDC.
RL   Adams M.J., Plant Pathology and Microbiology, Rothamsted Research, West
RL   Common, Herts., AL5 2JQ, UNITED KINGDOM.
XX
RN   [2]
RX   DOI; 10.1111/j.1439-0434.2009.01642.x.
RX   AGRICOLA; IND44366093.
RA   Wang J.G., Zheng H.Y., Chen H.R., Adams M.J., Chen J.P.;
RT   "Molecular Diversities of Sugarcane mosaic virus and Sorghum mosaic virus
RT   Isolates from Yunnan Province, China";
RL   J. Phytopathol. 158(6):427-432(2010).
XX
DR   MD5; fe9bd127b0b6dc1d19985343e978c3c5.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1819
FT                   /organism="Sugarcane mosaic virus"
FT                   /host="Saccharum officinarum cv. Luohanzhe"
FT                   /isolate="YN7"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Yunnan,Nanjian"
FT                   /db_xref="taxon:12224"
FT   CDS             <1..1584
FT                   /codon_start=1
FT                   /gene="polyprotein"
FT                   /product="polyprotein"
FT                   /db_xref="GOA:D6C758"
FT                   /db_xref="InterPro:IPR001205"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:D6C758"
FT                   /protein_id="CAX36843.1"
FT                   /translation="GNNSGQPSTVVDNTLMVILAFNYAMLSSGIREDEIDNCCRMFANG
FT                   DDLLLAVHPDFEYILDGFQNHFSSLGLNFDFTSRTREKSDLWFMSTRGIKCENIYIPKL
FT                   EKERIVAILEWDRSNLPEHRLEAICAAMVEAWGYPDLIHEIRKFYAWLLEMQPFANLAK
FT                   DGLAPYIAETALRNLYIGAGIKEEEIEKYYKQFAKDLPGYLEDYNEDVVHQAGTVDAGA
FT                   TGGSATGSGGSPPASGVTAPAASGTPPATGAAATVTGSAQPASGGSPPSTGSGTGAQAD
FT                   ANSANTQKDKDVDAGTTGALSVPKLKAMSKKMRLPKAKGSDILHLDFLLKYKPQQQDIS
FT                   NTRATREEFDRWYEAIQREYEINETQMKIIMSGLMVWCIENGCSPNINGSWTMMDGDEQ
FT                   RVFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDYSLARYA
FT                   FDFYEMTSRTPARAKEAHMQMKAAAVRGSNTRLFGLDGNVGETQENTERHTAGDVSRNM
FT                   HSLLGVQQHH"
FT   mat_peptide     <1..642
FT                   /product="NIb polymerase"
FT   mat_peptide     643..1581
FT                   /product="Coat protein"
FT   3'UTR           1585..1819
XX
SQ   Sequence 1819 BP; 569 A; 377 C; 440 G; 433 T; 0 other;
     gggaataata gcggacagcc atcaacagtt gtcgataata cactaatggt gatcttagct        60
     tttaactatg ccatgctgtc aagtggaatt cgagaagacg aaattgataa ctgttgtaga       120
     atgtttgcaa acggcgatga tttactctta gcagtgcacc ctgactttga atacatctta       180
     gatggatttc aaaatcactt cagtagcctc ggtttaaact tcgatttcac atctcgaaca       240
     agggaaaaat ctgacttatg gtttatgtca acgagaggaa taaagtgcga aaacatttat       300
     atacctaaac ttgagaagga gcgtatagtt gccatactag aatgggatcg atcaaaccta       360
     ccagaacatc gactcgaagc tatttgtgca gcaatggtag aggcatgggg ctatccagat       420
     cttatccatg aaattcggaa attttatgca tggcttctag aaatgcaacc cttcgccaat       480
     ctggcaaagg atggtttggc cccatatatt gcagagacag ctctacgcaa tttgtatatt       540
     ggagcaggca taaaggaaga ggaaatcgaa aaatactaca agcagtttgc aaaagatcta       600
     ccaggatact tagaagatta caacgaagat gtagttcatc aggcaggcac tgttgacgct       660
     ggtgcgacgg gaggaagtgc aaccggttct gggggttcac ccccagcaag tggtgtgaca       720
     gcacctgcag caagcggaac gccaccagca actggagcgg cagcaacagt cacagggtcc       780
     gcacaacctg cttcaggagg aagtcctcca tcgactggtt cagggacagg agcacaagcc       840
     gatgcgaact cagcgaatac acaaaaagac aaagatgtgg atgctggtac aacaggagca       900
     ctatcagtac ctaaactcaa agccatgtca aagaaaatgc gattacccaa ggcaaagggt       960
     agtgacatct tgcacttgga tttcttactt aagtacaaac cacaacagca agatatatcg      1020
     aacacgagag caaccagaga agagttcgat agatggtatg aagccataca aagagagtat      1080
     gagattaatg agacacaaat gaaaatcatt atgagtggtc ttatggtgtg gtgtatcgaa      1140
     aatggttgct caccaaatat taacggaagt tggactatga tggacggaga tgaacaaagg      1200
     gttttccctt tgaaaccagt tattgagaac gcatcaccaa catttcggca aataatgcat      1260
     cactttagtg atgccgctga agcatatatt gagtatagga actcaaccga gagatacatg      1320
     ccaagatacg gacttcagcg aaatctcacc gactatagct tagcgcggta tgcttttgat      1380
     ttttatgaga tgacatcacg cacaccagct agagctaagg aagcccacat gcagatgaaa      1440
     gccgcagcag ttcgtggttc aaacactcga ctgttcggtc tggacggaaa tgtcggcgag      1500
     actcaggaga atacagagag acacacagct ggcgatgtta gtcgcaacat gcactctctg      1560
     ttgggagtgc agcagcacca ttaatctcct ggaaaccctg tttgcagtac ctatagtatg      1620
     tttttgtgta ctagtataaa agtgaggctc cgcctcgtct ttacttttac tacctacgta      1680
     ctataagtgt gaaccagtct gcaagataca gggttggacc cagtgtcttc tggtgtagca      1740
     cgtactagcg tcgagccatg tcacggacag cactgggaat ggctttgcca tgtgtgctgc      1800
     gagtctcatg gtgagagac                                                   1819
//