ID FM955601; SV 1; circular; genomic DNA; STD; VRL; 2754 BP. XX AC FM955601; XX DT 07-JAN-2010 (Rel. 103, Created) DT 20-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Papaya leaf curl virus av2 gene, av1 gene, ac5 gene, ac3 gene, ac2 gene, DE ac1 gene and ac4 gene, clone MI69, complete genome XX KW complete genome. XX OS Papaya leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2754 RA Ilyas M.; RT ; RL Submitted (26-DEC-2008) to the INSDC. RL Ilyas M., Plant Biotechnology, NIBGE, P.O Box. 577, Jhang Road Faisalabad, RL 38000, PAKISTAN. XX RN [2] RX DOI; 10.1099/vir.0.020404-0. RX PUBMED; 20375225. RA Ilyas M., Qazi J., Mansoor S., Briddon R.W.; RT "Genetic diversity and phylogeography of begomoviruses infecting legumes in RT Pakistan"; RL J. Gen. Virol. 91(Pt 8):2091-2101(2010). XX DR MD5; a949bcd976f3104f9c0f3baa7448e6a4. XX FH Key Location/Qualifiers FH FT source 1..2754 FT /organism="Papaya leaf curl virus" FT /host="Rhynchosia capitata" FT /mol_type="genomic DNA" FT /country="Pakistan:Kundian, Mianwali" FT /isolation_source="leaf of Rhynchosia capitata" FT /collected_by="Muhammad Ilyas" FT /clone="MI69" FT /db_xref="taxon:53260" FT CDS 148..504 FT /transl_table=1 FT /gene="av2" FT /product="pre-coat protein" FT /db_xref="GOA:D2T121" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:D2T121" FT /protein_id="CAW31035.1" FT /translation="MWDPLLNEFPETVHGFRCMLAVKYLQLVENTYSPDTLGYDLIRDL FT ISVIRARNYVEATSRYNHFHARFEGTPPSQLRQSIREPCCCPHCPRHQSKSMGEQAHEQ FT KAQDVQDIQKSRCS" FT CDS 308..1078 FT /transl_table=1 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:D2T122" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D2T122" FT /protein_id="CAW31036.1" FT /translation="MSKRPADIIISTPVSKVRRRLNFDSPYVSRAAAPIVRVTKAKAWA FT NRPMNRKPRMYRIYRSPDVPRGCEGPCKVQSFESRHDIQHIGKVMCVSDVTRGTGLTHR FT VGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEP FT STATVKNVHRDRYQVLRKWYATVTGGQYASKEQALVKKFIRVNNYVVYNQQEAGKYENH FT SENALMLYMACTHASNPVYATLKIRIYFYDSVTN" FT CDS complement(722..973) FT /transl_table=1 FT /gene="ac5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:D2T123" FT /protein_id="CAW31037.1" FT /translation="MILILASFLLVIHNIIINSNKLLHESLFLRRILSTGDSCIPFAQN FT LVPITMHILHSRRTGLIIKHVKNLSKILRLVNWSTVSN" FT CDS complement(1075..1479) FT /transl_table=1 FT /gene="ac3" FT /product="replication enhancer protein" FT /db_xref="GOA:D2T124" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D2T124" FT /protein_id="CAW31038.1" FT /translation="MDSRTGELITAAQAQNGVFIWEIQNPLYFKITEHHNRPFLMNQDI FT ITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLDNLGVISINN FT VVRAVDHVLWNVLEHVVYVNQSSSIKFNIY" FT CDS complement(1220..1624) FT /transl_table=1 FT /gene="ac2" FT /product="transcription activator protein" FT /db_xref="GOA:D2T125" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D2T125" FT /protein_id="CAW31039.1" FT /translation="MRPSSPSKAHSTQVPIKVQHRLAKKGTRRRRVDLPCGCSYFIALA FT CHNHGFTHRGTHHCSSSTEWRIYLGDSKSPLFQDNRAPQQTIPHEPRHHHCPDTVQSQP FT EESVGDTQMFPSLPNLDDLTASDWSFLKGL" FT CDS complement(1527..2612) FT /transl_table=1 FT /gene="ac1" FT /product="replication associated protein" FT /db_xref="GOA:D2T126" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2T126" FT /protein_id="CAW31040.1" FT /translation="MPRNNSFCINAKNIFLTYPKCPIPKEQMLELLKNITCPSDKLFIR FT VSQEKHQDGSLHIHALIQFKGKSKFRNPRHFDVTHPNTSTQFHPNFQGAKSSSDVKSYI FT EKDGDYIDWGQFQIDGRSARGGQQTANDAAAEALNAGSADAALAIIREKLPKDFIFQYH FT NLKCNLDRIFTPPVEVYVSPFSSSSFDQVPEELEVWAAENVVDAAARPLRPKSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPVQIKGGIPAIFLCNPGPNSSYKEFLDEEKNSALKNWALKNATFITLEGPL FT YSGSNQSAAQASQEGDQASSC" FT CDS complement(2198..2584) FT /transl_table=1 FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D2T127" FT /protein_id="CAW31041.1" FT /translation="MPKISSLLIQNAQYRKSKCSNYLKTLPVLLINCLSEYHKKNTKMG FT LCISMPSSSSKVNPSSETPDISMSLTLIPPPNSTQTSRELSPAQMSSPTSRRTVITSTG FT VSFRSMEDLLEEVNRQLMMQQQRP" XX SQ Sequence 2754 BP; 750 A; 550 C; 645 G; 809 T; 0 other; accggatggc cgcgattttt tttttgtggc ccccacaaag cactaactga caatgacatg 60 ttgaccaatg agaatcgttc ctcgtagcct aattgtttcg tggtcccccc tataaactta 120 gtgcgcaagt tgtgttttcc attcactatg tgggatccgt tattgaacga gtttcccgaa 180 accgttcacg gttttaggtg tatgttagca gttaaatatc tgcagttagt agaaaatacg 240 tattccccag atactctggg atacgattta attagggatt tgatttcagt aataagggct 300 aggaattatg tcgaagcgac cagcagatat aatcatttcc acgcccgttt cgaaggtacg 360 ccgccgtctc aacttcgaca gtccatacgt gagccgtgct gctgccccca ttgtccgcgt 420 caccaaagca aaagcatggg cgaacaggcc catgaacaga aagcccagga tgtacaggat 480 atacagaagt ccagatgttc ctagaggatg tgaaggccca tgtaaggtcc agtcctttga 540 gtccagacat gatatccagc atataggtaa agtcatgtgt gtcagtgatg ttactcgtgg 600 aactgggctg acccatagag tgggtaagag attttgtgtc aagtctgtgt atgtgttggg 660 caagatttgg atggatgaga acatcaagac caagaatcat acgaatagtg ttatgttttt 720 tttagttaga gaccgtagac cagttgacaa gcctcaggat tttggagagg tttttaacat 780 gtttgataat gagcccagta cggcgactgt gaagaatgtg catcgtgata ggtaccaggt 840 tctgcgcaaa tggtatgcaa ctgtcaccgg tggacaatat gcgtcgaagg aacaagctct 900 cgtgaagaag tttattagag ttaataatta tgttgtgtat aaccagcaag aagctggcaa 960 gtatgagaat cattctgaga atgcgttaat gttgtatatg gcgtgtactc acgcctctaa 1020 tccagtgtat gctactttga agatacggat ctacttctat gattccgtga caaattaata 1080 aatattgaat tttattgaag atgattggtt tacatataca acatgctcta atacattcca 1140 taatacatga tcaactgctc taactacatt attaatactg ataactccta gattatctaa 1200 atacttaagc acttgggtct taaagaccct taagaaacga ccagtcggag gctgtgaggt 1260 catccagatt cggaaggcta ggaaacattt gtgtatcccc aacgctttcc tcaggttgtg 1320 attgaactgt atctggacag tgatgatgtc ttggttcatg aggaatggtc tgttgtggtg 1380 ctctgttatc ttgaaataga ggggattttg aatctcccag ataaatacgc cattctgtgc 1440 ttgagctgca gtgatgagtt cccctgtgcg tgaatccatg gttgtggcag gctaatgcta 1500 tgaagtatga acacccacac gggagatcaa cacgacgacg cctggtcccc ttcttggcta 1560 gcctgtgctg cactttgatt ggaacctgag tagagtgggc cttcgagggt gatgaaggtc 1620 gcattcttta atgcccaatt tttaagtgca gaattcttct cctcatccaa aaactcttta 1680 tagcttgagt tgggtcctgg attgcagagg aagatagcgg gaattccgcc tttaatttga 1740 actggctttc cgtactttgt atttgattgc cagtcccttt gggcccccat gaattcttta 1800 aagtgcttta ggtagtgggg atcgacgtca tcaatgacgt tgtaccaggc ctcgttgctg 1860 tagacctttg gactaaggtc taaatgacca cacagataat tgtgtggacc cagtgacctg 1920 gcccacatcg tcttccccgt tctactatca ccctctaaga caatactttt aggtctcaat 1980 ggccgcgcag cggcatccac cacgttctca gcagcccaga cttcaagttc ttccggaact 2040 tgatcaaaag aagaagaaga aaaaggagaa acataaacct ccacaggagg tgtaaaaatc 2100 ctatctaaat tacattttaa attatgatat tgaaaaataa aatctttagg gagtttttcc 2160 ctaattattg ctaaagcagc gtcagccgaa cctgcattta gggcctctgc tgctgcatca 2220 ttagctgtct gttgacctcc tctagcagat cttccatcga tctgaaactg accccagtcg 2280 atgtaatcac cgtccttctc gatgtaggac ttgacatctg agctggactt agctccctgg 2340 aagtttgggt ggaattgggt ggaggtatta gggtgagtga catcgaaatg tctggggttt 2400 ctgaacttgg atttaccttt gaactggatg agggcatgga tatgcagaga cccatcttgg 2460 tgtttttctt gtgatactct gataaacaat ttatcagaag gacaggtaat gtttttaagt 2520 agttcgagca tttgctcttt cggtattggg cattttggat aagtaaggaa gatatttttg 2580 gcatttatac agaaagagtt attacgaggc atattgaatt ggggacactc aaaactctga 2640 ggaatggggg actcggggga cgcatttata tggtgtcccc aaatggcaat ttggtaattc 2700 agaaagaaat ttcaaaatct ccacgctcca aaaagcggcc atccgtataa tatt 2754 //