ID   FM883226; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC   FM883226;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Maize dwarf mosaic virus partial polyprotein, isolate Sz0708, genomic RNA
XX
KW   .
XX
OS   Maize dwarf mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1298
RA   Petrik K.;
RT   ;
RL   Submitted (01-DEC-2008) to the INSDC.
RL   Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL   Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN   [2]
RX   DOI; 10.1007/s11262-009-0425-3.
RX   PUBMED; 19937270.
RA   Petrik K., Sebestyen E., Gell G., Balazs E.;
RT   "Natural insertions within the N-terminal region of the coat protein of
RT   Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL   Virus Genes 40(1):135-139(2010).
XX
DR   MD5; c94d3a0ae3badf9b5bd8578baa0b658d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Maize dwarf mosaic virus"
FT                   /host="Sorghum bicolor"
FT                   /isolate="Sz0708"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Szeged"
FT                   /collection_date="12-Jul-2007"
FT                   /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT                   aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT                   atcctaggttttttttttttttttttttttttttttgtc"
FT                   /db_xref="taxon:12203"
FT   CDS             <1..1064
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C6GZ39"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C6GZ39"
FT                   /protein_id="CAT99517.1"
FT                   /translation="LEMQPFADLAKEGLAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT                   DDLSDYLADEIIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKESKEKTA
FT                   EKTGDGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT                   DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWGIENGCSPNINGVWTMMDG
FT                   NEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTEKYMPRYGLQRNLTDFSLA
FT                   RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGDVGETQENTERHTAGDVS
FT                   RNIHSLLGVQQGH"
FT   mat_peptide     <1..188
FT                   /product="NIb"
FT   mat_peptide     189..1061
FT                   /product="CP"
FT   3'UTR           1065..1298
XX
SQ   Sequence 1298 BP; 421 A; 257 C; 314 G; 306 T; 0 other;
     tacttgaaat gcaacctttt gctgatttgg caaaggaagg cttggcaccg tacatagccg        60
     agtcagccct gagaaatttg tatactggtg ctaaggtttc agaagatgag ttaaatgtct       120
     atgcacgaca attctttgat gatctctcag attacttggc cgatgaaatc atagatgtta       180
     agcatcaagc tggcgagaat gttgatgccg ggcagaaaac tgaagcacag aaagaggcag       240
     agaaaaaggc agcagaagag aagaaagcaa aggaagctga ggctaaacaa aaagaatcca       300
     aggagaaaac ggctgagaaa actggtgatg gcggatccac gggaaaagac aaagacgtgg       360
     atgccggaac ctcaggctca gtatcagtcc ctaagttaaa agccatgtcc aagaagatgc       420
     gtttacctca ggcaaaagga aagaatatcc ttcatctcga ctttcttttg aaatacaaac       480
     cacaacaaca agacttatcg aacacccgag caaccagggc agagtttgat agatggtatg       540
     aagcagtgca gaaagaatac gaacttgatg acacacaaat gacggttgtc atgagtggac       600
     taatggtttg gggcattgaa aatggttgct ctccgaacat caatggtgtc tggacaatga       660
     tggacggaaa tgaacaaaga acttttcctt taaaaccagt tattgagaac gcatctccaa       720
     ctttcagaca aattatgcac cactttagtg atgcagctga agcatacatt gaatatagaa       780
     actcaacaga aaaatatatg ccgagatatg gacttcagcg aaacttaacc gactttagcc       840
     ttgcacgcta tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg       900
     aagcccacat gcagatgaag gccgcagcag tccgtggttc aaacacacgg atgtttggtc       960
     ttgatgggga cgtcggggaa acccaagaaa atacagaacg ccatacagct ggtgacgtta      1020
     gtcgcaacat tcactccctc ttgggagtcc agcaggggca ctgaaacggg gttcaacctt      1080
     tacgcagtaa tttagtaata tataagtaag ctattgtggt gaggttatac ctcgttagtt      1140
     ttatatatat attatgctac gtacctacta tgtctgcaag tgagtgaggt tatacctcga      1200
     cacttatggt aggcactatt actagcttcg aatcacgaga cggacgatcc attgagtggt      1260
     tctaccacga ggatgcagcg agtttcgtgg tgggggcc                              1298
//