ID   FM883224; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC   FM883224;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Maize dwarf mosaic virus partial polyprotein, isolate Sz0706, genomic RNA
XX
KW   .
XX
OS   Maize dwarf mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1298
RA   Petrik K.;
RT   ;
RL   Submitted (01-DEC-2008) to the INSDC.
RL   Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL   Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN   [2]
RX   DOI; 10.1007/s11262-009-0425-3.
RX   PUBMED; 19937270.
RA   Petrik K., Sebestyen E., Gell G., Balazs E.;
RT   "Natural insertions within the N-terminal region of the coat protein of
RT   Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL   Virus Genes 40(1):135-139(2010).
XX
DR   MD5; 098376534b767ac44bc80b750ae1c2b2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Maize dwarf mosaic virus"
FT                   /host="Sorghum halepense"
FT                   /isolate="Sz0706"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Szeged"
FT                   /collection_date="12-Jul-2007"
FT                   /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT                   aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT                   atcctaggttttttttttttttttttttttttttttgtc"
FT                   /db_xref="taxon:12203"
FT   CDS             <1..1064
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C6GZ37"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C6GZ37"
FT                   /protein_id="CAT99515.1"
FT                   /translation="LEVQPFADLAKEGSAPYIAESALRNLYTGAKVSEDGLNVYARQFF
FT                   DDLSDYLADEVIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKETKEKAT
FT                   EKTGEGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT                   DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT                   NEQKTFPLKPVIENASPTFRQIMHHFSDAAEAYFEYRNSPERYMPRYGLQRNLTDFSLA
FT                   RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGESQENTERHTAGDVS
FT                   RNIHSLLGVQQGH"
FT   mat_peptide     <1..188
FT                   /product="NIb"
FT   mat_peptide     189..1061
FT                   /product="CP"
FT   3'UTR           1065..1298
XX
SQ   Sequence 1298 BP; 418 A; 252 C; 313 G; 315 T; 0 other;
     tgctcgaagt gcaacctttt gctgatttag caaaggaagg ttcagcaccg tacatagccg        60
     agtcagccct tagaaattta tatactggtg ctaaggtttc agaggatgga ttgaatgttt       120
     atgcacgaca gttctttgat gatctttcag attatttggc tgacgaggtt atagacgtga       180
     agcatcaagc tggcgagaat gttgatgctg ggcagaaaac tgaagcacag aaggaggcag       240
     aaaagaaagc agctgaagaa aagaaagcaa aagaggctga agctaagcaa aaggaaacaa       300
     aggagaaagc aactgagaaa actggcgaag gcgggtccac aggaaaagac aaagacgtgg       360
     acgctggaac ctcaggctca gtatcagtac ctaagctcaa agccatgtcc aaaaagatgc       420
     gtttgcctca agcaaaagga aagaatatcc ttcacctcga ctttcttttg aaatataaac       480
     cacaacaaca agatttatca aacactcgag caactagggc tgaatttgat agatggtatg       540
     aagcagtgca gaaagagtac gaacttgatg atacacagat gacggttgtc atgagtggat       600
     taatggtatg gtgcatcgaa aatggctgct caccgaacat caatggtgtc tggaccatga       660
     tggacggaaa tgaacagaaa acattcccct taaaaccagt tattgagaat gcatctccaa       720
     ctttcagaca aattatgcac cactttagtg atgcagctga agcatatttt gaatatagaa       780
     attcaccaga aagatatatg ccaagatatg gacttcagcg aaacttaacc gactttagcc       840
     ttgcacgtta tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg       900
     aagcccacat gcagatgaag gctgcagcag tccgtggttc aaacacacgg atgtttggtc       960
     ttgatgggaa cgtcggcgaa tcccaagaaa acacagaacg ccacacagct ggtgacgtta      1020
     gtcgcaacat acactccctt ttgggagtcc agcaggggca ttgatacggg gttcaacttt      1080
     tacgcagtaa tttagtaata tataagtaag ctattgtggt gaggttgtac ctcgttagtt      1140
     ttatgtatat attatgctac gtacctacta tgtctgcaag tgagtgaggt tgtacctcga      1200
     cacttatagt gggcactatt actagcttcg aatcacgaga cggacgatcc attgagtggt      1260
     tctaccacga ggatgcagcg tctttcgtgg tgagagcc                              1298
//