ID   FM883217; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC   FM883217;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Maize dwarf mosaic virus partial polyprotein, isolate Sz0611, genomic RNA
XX
KW   .
XX
OS   Maize dwarf mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1298
RA   Petrik K.;
RT   ;
RL   Submitted (01-DEC-2008) to the INSDC.
RL   Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL   Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN   [2]
RX   DOI; 10.1007/s11262-009-0425-3.
RX   PUBMED; 19937270.
RA   Petrik K., Sebestyen E., Gell G., Balazs E.;
RT   "Natural insertions within the N-terminal region of the coat protein of
RT   Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL   Virus Genes 40(1):135-139(2010).
XX
DR   MD5; 5dde0b8a51fe106034a3c185bc6529ce.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Maize dwarf mosaic virus"
FT                   /host="Zea mays convar. dentiformis"
FT                   /isolate="Sz0611"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Szeged"
FT                   /collection_date="05-Jul-2006"
FT                   /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT                   aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT                   atcctaggttttttttttttttttttttttttttttgtc"
FT                   /db_xref="taxon:12203"
FT   CDS             <1..1064
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C6GZ30"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C6GZ30"
FT                   /protein_id="CAT99508.1"
FT                   /translation="LEVQPFADLAKEGLAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT                   DDLSDYLADEVIDVKHQAGENVDAGQKTEAQKEAEKKAAEEKKAKEAEAKQKETKEKAT
FT                   EKTGDGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT                   DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT                   DEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDFSLA
FT                   RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGESQENTERHTAGDVS
FT                   RNIHSLLGVQQGH"
FT   mat_peptide     <1..188
FT                   /product="NIb"
FT   mat_peptide     189..1061
FT                   /product="CP"
FT   3'UTR           1065..1298
XX
SQ   Sequence 1298 BP; 420 A; 251 C; 316 G; 311 T; 0 other;
     tacttgaagt gcaacctttt gctgatttgg caaaggaagg cttagcaccg tacatagccg        60
     agtcagccct gagaaactta tatactggtg ctaaggtttc agaggatgag ttgaatgtct       120
     atgcacgaca gttcttcgat gatctttcag attatttggc tgatgaagtt atagatgtta       180
     aacatcaagc tggtgagaat gtcgatgctg ggcagaaaac tgaagcacag aaggaagcag       240
     agaagaaggc agcagaagag aagaaagcaa aagaggctga agccaagcaa aaagaaacca       300
     aagagaaagc aactgagaaa actggcgatg gcgggtccac aggaaaagat aaagacgtgg       360
     acgctggaac ctcaggctca gtatcagtac ctaagcttaa agccatgtcc aagaagatgc       420
     gtttacctca ggcaaaaggg aagaatatcc ttcacctcga ctttctttta aaatacaagc       480
     cacaacaaca agacttatcg aacacccgag caaccagggc tgaattcgat agatggtatg       540
     aagcagtgca gaaagaatac gaacttgatg atacacaaat gacggttgtc atgagtggac       600
     taatggtttg gtgcattgaa aatggttgct caccgaacat caatggtgtc tggacaatga       660
     tggacggaga cgaacagaga acatttcctt taaaaccagt tattgagaat gcatctccaa       720
     ctttcagaca aattatgcac cactttagtg atgcagctga agcatacatt gagtatagaa       780
     attcaacaga aagatatatg ccgagatatg gacttcagcg aaacttaacc gactttagcc       840
     ttgcacgcta tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg       900
     aagcccacat gcagatgaag gctgcagcag tccgtggttc aaacacacgg atgtttggtc       960
     ttgatgggaa cgtcggagaa tcccaagaaa atacagaacg ccacacagct ggtgacgtta      1020
     gtcgcaacat acactccctt ttgggagtcc agcaggggca ttgatacggg gttcaacttt      1080
     tacgcagtaa tttagtaata tataagtaag ctattgtggt gaggttgtac ctcgttagtt      1140
     ttatatatat attatgctac gtacctacta tgtctgcaag tgagtgaggt tgtacctcga      1200
     cacttatagt gggcactatt actagcttcg aatcacgaga cggacgatcc attgagtggt      1260
     tctaccacga ggatgcagcg agtttcgtgg tgagagac                              1298
//