ID   FM883181; SV 1; linear; genomic RNA; STD; VRL; 1298 BP.
XX
AC   FM883181;
XX
DT   01-JUL-2009 (Rel. 101, Created)
DT   05-JAN-2010 (Rel. 103, Last updated, Version 2)
XX
DE   Maize dwarf mosaic virus partial polyprotein, isolate Sz0801, genomic RNA
XX
KW   .
XX
OS   Maize dwarf mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1298
RA   Petrik K.;
RT   ;
RL   Submitted (01-DEC-2008) to the INSDC.
RL   Petrik K., Department of Applied Genomics, Agricultural Research Institute,
RL   Brunszvik u. 2, Martonvasar, 2462, HUNGARY.
XX
RN   [2]
RX   DOI; 10.1007/s11262-009-0425-3.
RX   PUBMED; 19937270.
RA   Petrik K., Sebestyen E., Gell G., Balazs E.;
RT   "Natural insertions within the N-terminal region of the coat protein of
RT   Maize dwarf mosaic potyvirus (MDMV) have an effect on the RNA stability";
RL   Virus Genes 40(1):135-139(2010).
XX
DR   MD5; 899b207c79cf06e56a856402e3920030.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1298
FT                   /organism="Maize dwarf mosaic virus"
FT                   /host="Zea mays convar. dentiformis"
FT                   /isolate="Sz0801"
FT                   /mol_type="genomic RNA"
FT                   /country="Hungary:Szeged"
FT                   /collection_date="05-Jun-2008"
FT                   /PCR_primers="fwd_name: MDMV8198fwd, fwd_seq:
FT                   aaaccggtggytrctygaartgc, rev_name: MDMV3, rev_seq:
FT                   atcctaggttttttttttttttttttttttttttttgtc"
FT                   /db_xref="taxon:12203"
FT   CDS             <1..1064
FT                   /codon_start=3
FT                   /product="polyprotein"
FT                   /db_xref="GOA:C6GYZ4"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:C6GYZ4"
FT                   /protein_id="CAT99472.1"
FT                   /translation="LEMQPFADLAKEGLAPYIAESALRNLYTGAKVSEDELNVYARQFF
FT                   DDLSDYLADEIIDVKHQAGENVDAGQKTEAQKEAEKRAAEEKKAKEAEAKQKESKEKTA
FT                   EKTGDGGSTGKDKDVDAGTSGSVSVPKLKAMSKKMRLPQAKGKNILHLDFLLKYKPQQQ
FT                   DLSNTRATRAEFDRWYEAVQKEYELDDTQMTVVMSGLMVWCIENGCSPNINGVWTMMDG
FT                   DEQRTFPLKPVIENASPTFRQIMHHFSDAAEAYIEYRNSTERYMPRYGLQRNLTDFSLA
FT                   RYAFDFYEISSRTPARAKEAHMQMKAAAVRGSNTRMFGLDGNVGETQENTERHTAGDVS
FT                   RNIHSLLGVQQGH"
FT   mat_peptide     <1..188
FT                   /product="NIb"
FT   mat_peptide     189..1061
FT                   /product="CP"
FT   3'UTR           1065..1298
XX
SQ   Sequence 1298 BP; 422 A; 257 C; 313 G; 306 T; 0 other;
     tacttgaaat gcaacctttt gctgatttgg caaaggaagg cttggcaccg tacatagccg        60
     agtcagccct gagaaatttg tatactggtg ctaaggtttc agaagatgag ttaaatgtct       120
     atgcacgaca attctttgat gatctctcag attacttggc cgatgaaatc atagatgtta       180
     agcatcaagc tggcgagaat gttgatgccg ggcagaaaac tgaagcacag aaggaggcag       240
     agaaaagggc agcagaggag aagaaagcaa aggaagctga ggctaaacaa aaagaatcca       300
     aggagaaaac ggctgagaaa actggtgatg gcggatccac gggaaaagac aaagacgtgg       360
     atgccggaac ctcaggctca gtatcagtcc ctaagttaaa agccatgtcc aagaagatgc       420
     gtttacctca ggcaaaagga aagaatatcc ttcatctcga ctttcttttg aaatacaaac       480
     cacaacaaca agacttatcg aacacccgag caaccagggc agagtttgat agatggtatg       540
     aagcagtgca aaaagaatac gaacttgatg acacacaaat gacagttgtc atgagtggac       600
     taatggtttg gtgcattgaa aatggttgct ctccgaacat caatggtgtc tggacaatga       660
     tggacggaga tgaacagaga acatttcctt taaaaccagt tattgagaac gcatctccaa       720
     ctttcagaca aattatgcac cactttagtg atgcagctga agcatacatt gaatatagaa       780
     actcaacaga aagatatatg ccgagatatg gacttcagcg aaacttaacc gactttagcc       840
     ttgcacgcta tgcatttgat ttttacgaga tatcatctcg aactccagca cgtgcaaagg       900
     aagcccacat gcagatgaag gccgcagcag tccgtggctc aaacacacgg atgtttggtc       960
     ttgatgggaa cgtcggagaa acccaagaaa atacagaacg ccatacagct ggtgacgtta      1020
     gtcgcaacat tcactccctc ttgggagtcc agcaggggca ctgaaacggg gttcaacctt      1080
     tacgcagtaa tttagtaata tataagtaag ctattgtggt gaggttatac ctcgttagtt      1140
     ttatatatat attatgctac gtacctacta tgtctgcaag tgagtgaggt tatacctcga      1200
     cacttatggt aggcactatt actagcttcg aatcacgaga cggacgatcc attgagtggt      1260
     tttaccacga ggatgcagcg agtttcgtgg tgagagcc                              1298
//