ID FM877473; SV 1; circular; genomic DNA; STD; VRL; 2781 BP. XX AC FM877473; XX DT 23-JAN-2009 (Rel. 99, Created) DT 23-JUL-2009 (Rel. 101, Last updated, Version 2) XX DE African cassava mosaic virus complete genome, isolate Burkina DE Faso-Kamboinse-2008 XX KW complete genome. XX OS African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2781 RA Tiendrebeogo F.; RT ; RL Submitted (20-NOV-2008) to the INSDC. RL Tiendrebeogo F., Biochimie-Microbiologie, CRSBAN/UFR/SVT Universite de RL Ouagadougou, 03 BP 7131 Ouagadougou 03, BURKINA FASO. XX RN [2] RX DOI; 10.1111/j.1365-3059.2009.02110.x. RX AGRICOLA; IND44235492. RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Traore V.S.E., Barro N., RA Reynaud B., Traore A.S., Konate G., Traore O., Lett J.M.; RT "Occurrence of East African cassava mosaic virus-Uganda (EACMV-UG) in RT Burkina Faso"; RL Plant Pathol. 58(4):783-783(2009). XX DR MD5; 29e89c548094cb37252abffaa79fbf3a. XX FH Key Location/Qualifiers FH FT source 1..2781 FT /organism="African cassava mosaic virus" FT /host="Manihot esculenta" FT /isolate="Burkina Faso-Kamboinse-2008" FT /mol_type="genomic DNA" FT /country="Burkina Faso" FT /lat_lon="12.27 N 1.33 E" FT /collected_by="Fidele Tiendrebeogo" FT /collection_date="Sep-2008" FT /db_xref="taxon:10817" FT CDS 136..477 FT /gene="AV2" FT /product="AV2 protein" FT /db_xref="GOA:B8ZWP4" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8ZWP4" FT /protein_id="CAT00004.1" FT /translation="MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLVRDL FT VSVIRARNYVEATRRYHHFHARLQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHV FT QKAHDVQNV" FT CDS 296..1072 FT /gene="AV1" FT /product="coat protein (CP)" FT /db_xref="GOA:B8ZWP5" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8ZWP5" FT /protein_id="CAT00005.1" FT /translation="MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAW FT MNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTH FT RVGKRFGIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDN FT EPSTATIKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYE FT NHTENALLLYMACTHASNAVYATLKIRIYFYDSIGN" FT CDS complement(1069..1473) FT /gene="AC3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:B8ZWP6" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8ZWP6" FT /protein_id="CAT00006.1" FT /translation="MDLRTGELITAPQAMNGVYTWEINNPLYFTITRHQQRPFLLNQDI FT ITVQVRFNHNLRKELGIHKCFLNFKIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISIND FT VIRAADHVLFNVIEKTIECQLTHEIKFNVY" FT CDS complement(1214..1621) FT /gene="AC2" FT /product="transcription activator protein (TrAP)" FT /db_xref="GOA:B8ZWP7" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8ZWP7" FT /protein_id="CAT00007.1" FT /translation="MQSSSPSQNHSTQVPIKVSHRQFKKRAIRRRRVDLVCGCSYYLHI FT NCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNHQAPTTTIPAEPGHHNSTGSIQSQ FT PEEGAGDSQMFSQLQDLDDLTASDWSFLKGI" FT CDS complement(1530..2606) FT /gene="AC1" FT /product="replication associated protein (Rep)" FT /db_xref="GOA:B8ZWP8" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8ZWP8" FT /protein_id="CAT00008.1" FT /translation="MRTPRFRVQAKNVFLTYPKCSIPKEHLLSFIQTLSLPSNPKFIKI FT CRELHQNGEPHLHALIQFEGKITITNNRLFDCVHPSCSTNFHPNIQGAKSSSDVKSYLD FT KDGDTVEWGQFQIDGRSARGGQQSANDAYAKALNSGSKSEALNVIRELVPKDFVLQFHN FT LNSNLDRIFQEPPAPYVSPFPCSSFDQVPDEIEEWVADNVRDSAARPWRPNSIVIEGDS FT RTGKTIWARSLGPHNYLCGHLDLSPKVFNNDAWYNVIDDVDPHYLKHFKEFMGSQRDWQ FT SNTKYGKPVQIKGGIPTIFLCNPGPTSSYKEFLDEEKQAALKTWALKNAIFITLTEPLY FT SGSNQSQPQTIQEASHPT" FT CDS complement(2162..2677) FT /gene="AC4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8ZWP9" FT /protein_id="CAT00009.1" FT /translation="MSPINRRRCSRVSLVECLQLTWSKCELLVLEFKPRMSFSHTLSVL FT YPKNTCCHSSKHYLSHQTLSSLKSVESCIRMGNLTCMPSSNSRAKSRLRTIVSSIVYTP FT AVAPISTPTFKVPNQAQMSSPISIKTEIPSNGDNFRSMDDLLEAVNNQRMMLTPKRLTA FT AVSPKLLM" XX SQ Sequence 2781 BP; 750 A; 559 C; 690 G; 782 T; 0 other; accggttggc cccgcccccc tttaaacgtg gtccccgcgc actacgtatg tcggccaatc 60 atgctgtagc gttaaaggtt atttattagt gggggaccac tatatactta caggcgaagt 120 tgttgctagt gcgcaatgtg ggatccactg gtgaatgagt ttccagactc ggtgcatggg 180 cttaggtgta tgcttgcaat taaatatttg caggccttag aggatacata cgagcccagt 240 actttgggcc acgatctggt tagagatcta gtctcggtca tcagggcacg taactatgtc 300 gaagcgacca ggagatatca tcatttccac gccaggctcc aaggttcgtc gaaggctgaa 360 cttcgacagc ccatacagga accgtgctac tgcccccact gtccacgtca caaatcgaaa 420 acgggcctgg atgaacaggc ccatgtacag aaagcccatg atgtacagaa tgtatagaag 480 cccagacata cctaggggct gtgaaggccc atgtaaggtc cagtcgtttg agcagaggga 540 tgatgtgaag caccttggta tctgtaaggt gattagtgat gtgacacgtg ggcctgggct 600 gacacacaga gtgggaaaga gatttggtat caagtccatt tacattcttg gtaagatctg 660 gatggatgaa aatattaaga agcagaatca cacgaataat gtgatgttct acctgcttag 720 ggatagaagg ccgtatggca atacgcccca agactttggg cagatattta acatgtttga 780 taatgagccc agtactgcaa caattaagaa cgatttgagg gataggtttc aggtgatgag 840 gaaatttcat gccactgtta ttggtggtcc atctggcatg aaggagcagg cgttggtgaa 900 aaggttttac aggttgaatc atcacgtgac atacaatcac caggaggcag ggaagtacga 960 gaatcacaca gagaatgcgt tgcttttgta catggcatgt actcatgcct ccaatgctgt 1020 atatgctacg ttgaaaatac gtatatactt ctatgacagt attggcaatt aataaacatt 1080 gaattttatt tcatgagtca attgacactc aatagttttt tcaattacat tgaacaaaac 1140 atgatcagca gctctaatta catcgttaat ggagataaca cctatattat ccaagtattt 1200 aagtacttgg tatctaaata cccttaagaa aagaccagtc tgaggccgta aggtcgtcca 1260 gatcttgaag ttgagaaaac atttgtgaat ccccagctcc ttcctcaggt tgtgattgaa 1320 tcgaacctgt actgttatga tgtcctggtt cagcaggaat ggtcgttgtt ggtgcctggt 1380 gattgtgaaa tacaggggat tgtttatttc ccaggtatac acgccattca ttgcttgagg 1440 agcagtgatg agttcccctg tgcgtaaatc catgattgga gcagttgata tggaggtaat 1500 atgaacagcc acagacaaga tccactctcc tacgtcggat ggctcgcttc ttgaattgtc 1560 tgtggctgac tttgattgga acctgagtag agtggttctg tgagggtgat gaagattgca 1620 ttctttaatg cccaggtctt tagcgctgct tgcttttcct cgtctaggaa ctctttatag 1680 gacgaggtag gtcctggatt gcagaggaag atagtgggaa tgccaccttt aatttgaacg 1740 ggtttcccgt atttcgtgtt ggactgccag tccctctggg accccatgaa ttccttaaag 1800 tgctttaggt agtggggatc gacgtcatca atgacgttgt accaggcatc attattgaag 1860 acctttggac taaggtccag gtgtccacac aggtaattgt gtgggcctaa agatctggcc 1920 catatcgtct tccctgttct gctatcacct tctattacaa tactattggg tctccatggc 1980 cgcgcagcgg aatccctaac attatcagcg acccattctt caatttcatc aggaacttgg 2040 tcaaaggaag aacatgggaa gggagaaaca taaggagctg gtggctcctg gaaaatccga 2100 tccaaattac tatttagatt atgaaattga agtacgaagt cctttgggac taattcccta 2160 attacattaa gagcttcgga cttactgccg ctgttaagcg ctttggcgta agcatcattc 2220 gctgattgtt gaccgcctct agcagatcgt ccatcgatct gaaattgtcc ccattcgacg 2280 gtatctccgt ctttatcgag ataggacttg acatctgagc ttgatttggc accttgaatg 2340 ttggggtgga aattggtgct acagctgggg tgtacacaat cgaagagacg attgttcgta 2400 atcgtgattt tgccctcgaa ttggatgagg gcatgcaagt gaggttcccc attctgatgc 2460 agctctctac agattttaat gaacttaggg tttgatggga gagatagtgt ttggatgaat 2520 gacagcaggt gttctttggg tatagaacac ttagggtatg tgagaaagac attcttggct 2580 tgaactctaa aacgaggagt tcgcattttg accaagtcaa ttggagacac tcaactagag 2640 acactcttga gcatctcctc cggttaattg gagacattat ataggtgtct ctaaatggca 2700 ctcttgtaat aagtggaact ttaatttgaa tgaaaaggct caaaaggcgc agaacaccca 2760 aggggccaac cgtataatat t 2781 //