ID FM876849; SV 1; circular; genomic DNA; STD; VRL; 2786 BP. XX AC FM876849; XX DT 20-JAN-2009 (Rel. 99, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 3) XX DE Pepper yellow vein Mali virus complete genome, isolate Burkina DE Faso-Ouaga-sweet pepper1-2008 XX KW complete genome. XX OS Pepper yellow vein Mali virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2786 RA Tiendrebeogo F.; RT ; RL Submitted (19-NOV-2008) to the INSDC. RL Tiendrebeogo F., Biochimie-Microbiologie, CRSBAN/UFR/SVT Universite de RL Ouagadougou, 03 BP 7131 Ouagadougou 03, BURKINA FASO. XX RN [2] RX DOI; 10.1007/s00705-010-0854-2. RX PUBMED; 21080204. RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Traore V.S., Barro N., RA Perefarres F., Reynaud B., Traore A.S., Konate G., Lett J.M., Traore O.; RT "Molecular and biological characterization of pepper yellow vein Mali virus RT (PepYVMV) isolates associated with pepper yellow vein disease in Burkina RT Faso"; RL Arch. Virol. 156(3):483-487(2011). XX DR MD5; 74fa4e046a48722d1258a3c9ed232c32. DR EuropePMC; PMC6344024; 30673741. XX FH Key Location/Qualifiers FH FT source 1..2786 FT /organism="Pepper yellow vein Mali virus" FT /host="Capsicum annuum var. annuum" FT /strain="Mali" FT /isolate="Burkina Faso-Ouaga-sweet pepper1-2008" FT /mol_type="genomic DNA" FT /country="Burkina Faso" FT /lat_lon="12.39 N 1.55 W" FT /collected_by="Fidele Tiendrebeogo" FT /collection_date="Jul-2008" FT /db_xref="taxon:260378" FT CDS 139..489 FT /gene="V2" FT /product="movement protein (MP)" FT /db_xref="GOA:B8ZWM0" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8ZWM0" FT /protein_id="CAS97477.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEESYEPNTLGHDLIRDL FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIHQPCCCPHCPRHKQASIMDLPAHV FT SKAQDVQNVQKP" FT CDS 299..1075 FT /gene="CP" FT /product="coat protein (CP)" FT /db_xref="GOA:B8ZWM1" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B8ZWM1" FT /protein_id="CAS97478.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPIAQGTNRRRSW FT TYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH FT RVGKRFCIKSIYMLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPQDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1072..1476) FT /gene="C3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:B8ZWM2" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8ZWM2" FT /protein_id="CAS97479.1" FT /translation="MDSRTGEHITALQAKNGVFIWEINNPLYFTITNHDIRPFNMNQDI FT LTLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFRFQVLKYLNNLGVISINN FT VIRAVDHVLYVVLVNTISVMENHEIKFNLY" FT CDS complement(1217..1624) FT /gene="C2" FT /product="transcription activator protein (TrAP)" FT /db_xref="GOA:B8ZWM3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8ZWM3" FT /protein_id="CAS97480.1" FT /translation="MQPSSPSTGHSTQVPIKVIHRRAKTKAIRRKRIDLDCGCSYYLHI FT DCINHGFTHRGTHHCSSSKEWRFYMGDKQSPLFHDNKPRHQAIQHEPRHPHTPNTIQSQ FT PQEGTGDSQMFSQLQGLDDLTASDWSFLKSL" FT CDS complement(1548..2612) FT /gene="C1" FT /product="replication associated protein (Rep)" FT /db_xref="GOA:B8ZWM4" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8ZWM4" FT /protein_id="CAS97481.1" FT /translation="MAPPKRFKINSKNYFLTFPKCSLTKEEALEQLLNLSTPTNKRFIK FT VCRELHTNGEPHLHVLMQFEGKYQCTNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGVFQVDGRSARGGCRNANDAAAEALNADSAEAAMAIIREKLPKEFIFQYH FT NLKNNLDRIFQEPPAHYVSPFLSSSFTQVPDELEEWVSENVMGAAARPWRPNSIVVEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDW FT QSNTKYGKPIQIKGGIPSIFLCNPGPTSSYKEFLEEAKNYALKSWTLKNATFVTLDRPL FT YSSTNQGHPPQSQD" FT CDS complement(2198..2455) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8ZWM5" FT /protein_id="CAS97482.1" FT /translation="MGNLISMCLCSSRGNTSARITDSSTWYPQPGQHISIQTFRELNQA FT PTSSPTSTRTETPLNGGYSRSTAEVLGEAAEMLTTQQQRP" XX SQ Sequence 2786 BP; 722 A; 576 C; 658 G; 830 T; 0 other; accggatggc cgcgcccccg aaaaagatat gggccccacg cactaatttg tgtcgaccaa 60 tcatatcgca gcctgaaagg ctagatattt attttttgtc tttatatact tgggcaccaa 120 gtatgggcct tgtccatcat gtgggatcca cttttgaacg agtttcccga gtccgttcac 180 ggatttcgtt gtatgctcgc cattaaatat ttgcaggccg tggaggaaag ttacgagccc 240 aatactttgg gccacgattt aattagggat cttattagtg ttattagggc ccgagactat 300 gtcgaagcga cccggcgata taatcatttc cacgcccgtc tcgaaggttc gtcgaaggct 360 gaacttcgac agcccataca ccagccgtgc tgctgtcccc attgcccaag gcacaaacag 420 gcgtcgatca tggacctacc ggcccatgta tcgaaagccc aggatgtaca gaatgttcag 480 aagccctgac gtccctcgtg gttgtgaggg tccgtgtaag gttcagtcct acgaacagag 540 ggatgatgtt aagcacacgg gtattgttcg atgcgttagt gatgtcacac gtggcccggg 600 tattacgcat cgtgtaggaa agagattttg tattaagtct atatatatgc tgggtaagat 660 ctggatggat gaaaatatca agaagcagaa tcacaccaac caggttatgt tttttttagt 720 tcgtgataga aggccctatg gaaccagccc acaggatttt gggcaggttt ttaacatgtt 780 cgataatgag cccagtactg ctacggtgaa gaatgatttg cgtgatcgtt atcaagtcct 840 caggaaattc catgctacgg tagttggtgg accctctggg atgaaagagc aggctttagt 900 aaagaggttt tttagggtta acacgcacgt cgtgtacaat catcaggaag cagctaaata 960 tgagaaccat actgagaatg ctttgttgtt gtatatggca tgtactcatg cctctaaccc 1020 tgtgtatgct actctgaaga tacgcatcta tttttatgat gccgttacga attaataaag 1080 attgaatttt atttcatgat tttccataac ggaaatcgta tttacaagta caacatataa 1140 cacatgatca actgctctaa tgacattatt gatagaaatt acacctaaat tattcaaata 1200 ttttaaaact tggaacctaa agactcttaa gaaaagacca gtctgaggcc gtaaggtcgt 1260 ccagaccttg aagttgagaa aacatttgtg aatccccagt gccctcctga ggttgtgatt 1320 gaatcgtatt tggagtgtga ggatgtcttg gttcatgttg aatggcctga tgtcgtggtt 1380 tgttatcgtg aaatagaggg gattgtttat ctcccatata aaaacgccat tctttgcttg 1440 aagagcagtg atgtgttccc ctgtgcgtga atccatggtt gatgcagtcg atgtggaggt 1500 agtatgaaca gccgcagtcg aggtctattc gcttacggcg aatggcttta gtcttggctc 1560 tgcggtggat gaccttgatt ggtacttgag tagagtggcc tgtcgagggt gacgaaggtt 1620 gcattcttta atgtccagct cttgagtgcg taattcttcg cctcttctag gaattcttta 1680 tatgaggaag ttgggccagg attgcagagg aagatagagg gaattccgcc tttaatttga 1740 attggcttcc cgtactttgt gttgctttgc cagtccctct gggccccaaa gaattctttc 1800 cagtgcttta gatagtgcgg gtcgacgtca tcaatgacgt tataccatgc atcattagaa 1860 taaacctttg gacttaagtc taaatgacca cataagtaat tatgtggccc taatgaccta 1920 gcccaaacag ttttgccggt acgactatcg ccctctacta caatactatt aggcctccac 1980 ggccgcgcag cggcacccat gacattctca gacacccact cttcaagttc gtctggaact 2040 tgagtaaaag aagacgaaag aaaaggagaa acataatgag ctgggggctc ctgaaaaatc 2100 ctatctaaat tattttttaa attatgatat tgaaaaataa attctttagg gagtttctcc 2160 ctaataatag ccatagcggc ttcagcggaa tctgcattta aggcctctgc tgctgcgtcg 2220 ttagcatttc tgcagcctcc cctagcactt ctgccgtcga cctggaatac cccccattca 2280 agggtgtctc cgtccttgtc gatgtaggac ttgacgtcgg agcttgattt agctccctga 2340 atgtttggat ggaaatgtgc tgacctggtt ggggatacca ggtcgaagaa tctgttattc 2400 gtgcactggt atttcccctc gaactgcata agcacatgga gatgaggttc cccattcgtg 2460 tgcaactctc tgcagacttt gatgaatctt ttatttgttg gggttgacag atttagaagt 2520 tgctctaacg cttcttcttt agtgagggag cattttggga aagtgaggaa gtaatttttg 2580 gaatttattt taaaacgctt tggaggagcc atatggtcaa tgtaccccga ttgaccgctc 2640 ttggcaactg gcgcctacaa tcggtgtaat ggggtacaat atatacctgt acccctaatg 2700 gcattatggt aatttggtaa agttcttgtc actttaattc gaaattcaaa tttcgaattt 2760 cttttagcgg ccatccgtat aatatt 2786 //