ID FM876847; SV 1; circular; genomic DNA; STD; VRL; 2786 BP. XX AC FM876847; XX DT 20-JAN-2009 (Rel. 99, Created) DT 04-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Pepper yellow vein Mali virus complete genome, isolate Burkina DE Faso-Bazega-sweet pepper-2007 XX KW complete genome. XX OS Pepper yellow vein Mali virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2786 RA Tiendrebeogo F.; RT ; RL Submitted (19-NOV-2008) to the INSDC. RL Tiendrebeogo F., Biochimie-Microbiologie, CRSBAN/UFR/SVT Universite de RL Ouagadougou, 03 BP 7131 Ouagadougou 03, BURKINA FASO. XX RN [2] RX DOI; 10.1007/s00705-010-0854-2. RX PUBMED; 21080204. RA Tiendrebeogo F., Lefeuvre P., Hoareau M., Traore V.S., Barro N., RA Perefarres F., Reynaud B., Traore A.S., Konate G., Lett J.M., Traore O.; RT "Molecular and biological characterization of pepper yellow vein Mali virus RT (PepYVMV) isolates associated with pepper yellow vein disease in Burkina RT Faso"; RL Arch. Virol. 156(3):483-487(2011). XX DR MD5; f6b0d7fd8743ec21d7b2efc2a50a285f. XX FH Key Location/Qualifiers FH FT source 1..2786 FT /organism="Pepper yellow vein Mali virus" FT /host="Capsicum annuum var. annuum" FT /strain="Mali" FT /isolate="Burkina Faso-Bazega-sweet pepper-2007" FT /mol_type="genomic DNA" FT /country="Burkina Faso" FT /lat_lon="11.58 N 1.26 W" FT /collected_by="Fidele Tiendrebeogo" FT /collection_date="Nov-2007" FT /db_xref="taxon:260378" FT CDS 139..489 FT /gene="V2" FT /product="movement protein (MP)" FT /db_xref="GOA:B8ZWK8" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B8ZWK8" FT /protein_id="CAS97465.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKFLQAVEETYEPNTLGHDLIRDL FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIHQPCCCPHCPRHKQASIMDLPAHV FT SKAQDVQNVQKP" FT CDS 299..1075 FT /gene="CP" FT /product="coat protein (CP)" FT /db_xref="GOA:B8ZWK9" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:B8ZWK9" FT /protein_id="CAS97466.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVPIAQGINRRRSW FT TYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH FT RVGKRFCIKSMYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPQDFGQVFNMFDN FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT CDS complement(1072..1476) FT /gene="C3" FT /product="replication enhancer protein (REn)" FT /db_xref="GOA:B8ZWL0" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B8ZWL0" FT /protein_id="CAS97467.1" FT /translation="MDSRTGEHITALQAKNGVFIWEINNPLYFTITNHEIRPFNMNQDI FT LTLQIRFNHNLRRALGIHKCFLNFKVWTTLRPQTGLFLRVFRFQVWKYLNNLGVISINN FT VIRAVDHVLYVVLVNTISVMETHEIKFNLY" FT CDS complement(1217..1624) FT /gene="C2" FT /product="transcription activator protein (TrAP)" FT /db_xref="GOA:B8ZWL1" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B8ZWL1" FT /protein_id="CAS97468.1" FT /translation="MQPSSPSTGHSTQVPIKVIHRRAKTKAIRRKRIDLDCGCSYYLHI FT DCINHGFTHRGTHHCSSSKEWRFYMGDKQSPLFHDNKPRDQAIQHEPRHPHTPNTIQSQ FT PQEGTGDSQMFSQLQGLDDLTASDWSFLKGI" FT CDS complement(1548..2612) FT /gene="C1" FT /product="replication associated protein (Rep)" FT /db_xref="GOA:B8ZWL2" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B8ZWL2" FT /protein_id="CAS97469.1" FT /translation="MAPPKRFKISSKNYFLTFPKCSLTKEEALEQLLNLSTPTNTKFIK FT VCRELHTNGEPHLHVLMQFEGKYQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGVFQVDGRSARGGCRNANDAAAEALNAGSAEAAMAIIREKLPKEFIFQYH FT NLKPNLDRIFQEPPAPYVSPFLSSSFTQVPEELEEWVSENVMGAAARPWRPNSIVVEGD FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDW FT QSNTKYGKPIQIKGGIPSIFLCNPGPTSSYKEFLEEAKNYALKNWTLKNATFVTLDRPL FT YSSTNQGHPPQSQD" FT CDS complement(2198..2455) FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:B8ZWL3" FT /protein_id="CAS97470.1" FT /translation="MGNLISTCLCSSRGNTSARITDSSTWYPQPGQHISIRTFRELNQA FT PTSSPTSTRTETPLNGGYSRSTEEVLGEAVEMLTTLQQRP" XX SQ Sequence 2786 BP; 716 A; 577 C; 655 G; 838 T; 0 other; accggatggc cgcgcccccg aaaaagatat gggccccacg cactactatg tgtcgaccaa 60 tcatatcgca gcctgaaagg ctagatattt gttttttgtc tttatatact tgggcaccaa 120 gtatgggcct tgtccatcat gtgggatcca cttttgaacg agtttcccga atccgttcac 180 ggatttcgtt gtatgctcgc cattaaattt ttgcaggccg tggaggaaac ttacgagccc 240 aatactttgg gccacgattt aattagggat cttattagtg ttattagggc tcgagactat 300 gtcgaagcga cccggcgata taatcatttc cacgcccgtc tcgaaggttc gtcgaaggct 360 gaacttcgac agcccataca ccagccgtgc tgctgtcccc attgcccaag gcataaacag 420 gcgtcgatca tggacctacc ggcccatgta tcgaaagccc aggatgtaca gaatgttcag 480 aagccctgat gtccctcgtg gttgtgaggg tccgtgtaag gttcagtcgt acgaacagag 540 ggatgatgtt aagcacactg gtattgttcg ctgcgttagt gatgtcacac gtggcccggg 600 tattactcat cgtgtaggaa agagattttg tattaagtct atgtatattc tgggtaagat 660 ctggatggat gaaaatatca agaagcagaa tcacaccaac caggtcatgt tttttttagt 720 tcgtgataga aggccctatg gaaccagccc acaggatttt gggcaggttt ttaacatgtt 780 cgataatgag cccagtactg ctacggtgaa gaatgatttg cgtgatcgtt atcaagtcct 840 caggaaattc catgctacgg tagttggtgg accctctggg atgaaagagc aggctttagt 900 caagaggttt tttagggtta acacgcacgt cgtgtacaat catcaggaag cagctaaata 960 tgagaatcat actgagaatg ctttgttgtt gtatatggca tgtactcatg cctctaaccc 1020 tgtgtatgct acgcttaaga tacgcatcta tttttatgat gccgttacga attaataaag 1080 attgaatttt atttcatgag tttccataac ggaaatcgta tttacaagta caacatataa 1140 cacatgatca actgctctaa ttacattatt gatagaaatt acacctaaat tattcaaata 1200 cttccaaact tggaacctaa atacccttaa gaaaagacca gtctgaggcc gtaaggtcgt 1260 ccagaccttg aagttgagaa aacatttgtg aatccccagt gccctcctga ggttgtgatt 1320 gaatcgtatt tggagtgtga ggatgtcttg gttcatgttg aatggcctga tctcgtggtt 1380 tgttatcgtg aaatagaggg gattgtttat ctcccatata aaaacgccat tctttgcttg 1440 aagagcagtg atgtgttccc ctgtgcgtga atccatggtt gatgcagtcg atgtggaggt 1500 agtatgaaca gccgcagtcg aggtctattc gcttacggcg aatggcttta gtcttggctc 1560 tgcggtggat gaccttgatt ggtacttgag tagagtggcc tgtcgagggt gacgaaggtt 1620 gcattcttta gtgtccagtt cttgagtgcg taattcttcg cctcttctag gaattcttta 1680 tatgaggatg ttgggcctgg attgcagagg aagatagagg gaattccgcc tttaatttga 1740 attggcttcc cgtactttgt gttgctttgc cagtccctct gggccccaaa gaattctttc 1800 cagtgcttta gatagtgcgg gtcgacgtca tcaatgacgt tataccaagc atcattagaa 1860 taaacctttg gacttaagtc taaatgacca cataagtaat tatgtggccc taatgaccta 1920 gcccaaacag ttttgccggt acgactatcg ccctctacta caatactatt aggcctccac 1980 ggccgcgcag cggcacccat gacattctca gacacccact cttcaagttc ttctggaact 2040 tgagtaaaag aagacgaaag aaaaggagaa acataaggag ctggaggctc ttgaaaaatc 2100 ctatctaaat taggttttaa attatgatat tgaaaaataa attctttagg gagtttctcc 2160 ctaataatag ccatagcggc ttcagcggaa cctgcattta aggcctctgc tgcagcgtcg 2220 ttagcatttc gacagcctcc cctagcactt cttccgtcga cctggaatac cccccattca 2280 agggtgtctc cgtccttgtc gatgtaggac ttgacgtcgg agcttgattt agctccctga 2340 atgttcggat ggaaatgtgt tgacctggtt ggggatacca ggtcgaagaa tctgttattc 2400 gtgcactggt atttcccctc gaactgcata agcacgtgga gatgaggttc cccatttgtg 2460 tgcaactctc tgcagacttt gatgaatttt gtatttgttg gggttgacag atttagaagt 2520 tgctctaacg cttcctcttt agttagggag cattttggga aagtgaggaa ataatttttg 2580 gaacttattt taaaacgctt tggaggagcc atttggtcaa tgtaccccaa ttgaccgctc 2640 ttggcatttg gtgcctacaa ttggggtaat ggggtacaat atatactcgt acccctaatg 2700 gcattatggt aatttggtaa agctcttttc actttaattc gaaatttgaa ttccgaattt 2760 tttttagcgg ccatccgtat aatatt 2786 //