Dbfetch
ID FM208844; SV 1; circular; genomic DNA; STD; VRL; 2746 BP. XX AC FM208844; XX DT 31-AUG-2009 (Rel. 102, Created) DT 20-JUN-2013 (Rel. 117, Last updated, Version 2) XX DE Mungbean yellow mosaic India virus, segment DNA-A, complete sequence, clone DE MI12 XX KW complete viral segment. XX OS Mungbean yellow mosaic India virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2746 RA Ilyas M.; RT ; RL Submitted (31-AUG-2008) to the INSDC. RL Ilyas M., Plant Biotechnology, NIBGE, P.O Box. 577, Jhang Road Faisalabad, RL 38000, PAKISTAN. XX RN [2] RX DOI; 10.1099/vir.0.020404-0. RX PUBMED; 20375225. RA Ilyas M., Qazi J., Mansoor S., Briddon R.W.; RT "Genetic diversity and phylogeography of begomoviruses infecting legumes in RT Pakistan"; RL J. Gen. Virol. 91(Pt 8):2091-2101(2010). XX DR MD5; 5686b4981504deb212d69b7fcd48900d. XX FH Key Location/Qualifiers FH FT source 1..2746 FT /organism="Mungbean yellow mosaic India virus" FT /segment="A" FT /host="Vigna mungo" FT /mol_type="genomic DNA" FT /country="Pakistan:Islamabad" FT /isolation_source="leaf of Vigna mungo" FT /collected_by="Muhammad Ilyas" FT /clone="MI12" FT /db_xref="taxon:223287" FT CDS 156..497 FT /gene="av2" FT /product="pre-coat" FT /db_xref="GOA:C7TPD5" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:C7TPD5" FT /protein_id="CAR64478.1" FT /translation="MWDPLLNDFPKSVHGFRCMLAIKYLQQVQENYPSNSVGYSYLTGL FT IQVLRIRNHAKADLRYCLLYPDIECTEEIELRYPAHAPCFCGRCPYQHEKKALDQPPHV FT EETSVLPTV" FT CDS 316..1089 FT /gene="av1" FT /product="coat protein" FT /db_xref="GOA:C7TPD6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C7TPD6" FT /protein_id="CAR64479.1" FT /translation="MPKRTYDTAFSTPISNARRRLNFDTPLMLPASAGGVPTNMKRRRW FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEQRHDIAHTGKLICISDVTRGNGITH FT RIGKRFCIKSVYITGKVWMDENIKSKNHTNTVMFKLCRDRRPFGTPMDFGQVFNMYDNE FT PSTATVKNDLRDRYQVLRKFNATVTGGQYACKEQAMVNRFFKVNNYVVYNHQEAAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDSILN" FT CDS complement(733..984) FT /gene="ac5" FT /product="AC5 protein" FT /db_xref="InterPro:IPR006892" FT /db_xref="UniProtKB/TrEMBL:C7TPD7" FT /protein_id="CAR64480.1" FT /translation="MVLILRCLLVVVNNIIINFEKTIHHGLFLTSILATSNGGIKLSQY FT LITITQIVLHSSCTGLVVIHVEHLTKIHGCTKWSSVTT" FT CDS complement(1228..1680) FT /gene="ac2" FT /product="transcription activator protein" FT /db_xref="GOA:C7TPD8" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C7TPD8" FT /protein_id="CAR64481.1" FT /translation="MKRTMLRLNSGLQRMRNSTPSKNHCSPPSIKVQHRVAKKRAIRRS FT RIDLTCGCSYYIHINCRNYGFSHRGVHHCSSTQEWRLYLRGAKSPLFQDHAPQSNSSRV FT QNDGHQAAHNVQPQVEESTGDAQVLPGIEALPLFDGDFWDDLIDLP" FT CDS complement(1538..2626) FT /gene="ac1" FT /product="replication associated protein" FT /db_xref="GOA:C7TPD9" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C7TPD9" FT /protein_id="CAR64482.1" FT /translation="MPREGRFAINAKNYFLTYPKCPLTKEDALEQLLALSTPVNKKFIR FT ICRELHEDGQPHLHVLLQFEGKQQTKNQRFFDLHSRCRSAYYHPNIQAAKSCSDVKSYM FT EKDGDVLDHGTFQIDGRSARGGNQSANDAYAEALNSGSKLEALLILKEKAPKDFILQFH FT NLNCNLSRIFTEPVQAYQSPFTLESFNKVPSYISSWAERNVRDPAARPDRPISIVIEGD FT SRTGKTMWARAIGPHNYLCGHLDLNDKTYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNVKYGEPTKIKGGIPTIFLCNPGPKSSYKEYLDEENNAALKQWASKNAEFYTLKEPL FT FSSVNQGSTQGRQEESNSTISN" FT CDS complement(2176..2475) FT /gene="ac4" FT /product="AC4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C7TPE0" FT /protein_id="CAR64483.1" FT /translation="MKMDSLISMFCFSSKGNNKRKTKGSSTSIPDADRHITIRTFRQLK FT AAQMLNHTWRKTETSLIMELSKSMADQLEEVTNLPTTHTPRHSTLDQSWRPSLY" XX SQ Sequence 2746 BP; 730 A; 580 C; 617 G; 819 T; 0 other; acctgagtgc cccgcgaccg gtgtattggg gttgctttag cttttttgct ttttgggtac 60 ccttatcttt agtcgttcaa tcagaagcgc tcctcagcgc tatgttaatt caaatttgaa 120 ttataaagca tgtgcacact ctgaacccac taacaatgtg ggatccattg ttgaacgact 180 ttcccaaatc agtgcatgga ttccggtgca tgttggcaat aaagtatttg cagcaagttc 240 aagagaatta tccctctaat tctgttggtt attcgtacct tacagggtta attcaggtat 300 tgcgcatccg gaatcatgcc aaagcggacc tacgatactg ccttctctac cccgatatcg 360 aatgcacgga ggagattgaa cttcgatacc ccgctcatgc tccctgcttc tgcgggaggt 420 gtccctacca acatgaaaag aaggcgttgg accaaccgcc ccatgtggag gaaacctcgg 480 ttttaccgac tgtataggtc ccctgatgtc cctcgtggtt gtgagggacc atgtaaagtt 540 caatcatttg agcagaggca tgatattgcc cacacaggca aattgatttg catatcggac 600 gtgactagag gtaatggaat tacacatcgt attggcaaac gtttttgcat caagtccgtg 660 tacattactg ggaaggtttg gatggacgaa aacattaagt ccaaaaatca cacgaacact 720 gtgatgttca agttatgtcg tgacagacga ccatttggta cacccatgga ttttggtcaa 780 gtgttcaaca tgtatgacaa cgagcccagt acagctactg tgaagaacga tctgcgtgat 840 cgttatcaag tattgcgaaa gtttaatgcc accgttactg gtggccaata tgcttgtaag 900 gaacaagcca tggtgaatcg ttttttcaaa gttaataatt atgttgttta caaccaccag 960 gaggcagcga agtatgagaa ccatactgag aacgcattat tattgtatat ggcatgtact 1020 catgcctcaa atcctgtgta tgcaactctt aaaattcgga tctattttta cgattcgata 1080 ttgaattaat aaagtttgta ttgaacatta tgcgtaaagc ttacatcctc caccaggtgg 1140 agtttattgt acaggaaatc cgacgcgaaa tataaaatat ttgctaagct aatgacccct 1200 aaattattta gaaacctaaa taattggtta cggaagatcg ataagatcat cccagaagtc 1260 gccgtcaaat agtggtagag cttcaattcc aggaagcact tgtgcatccc cagtgctttc 1320 ttcaacctgt ggttgaacat tatgcgcagc ttggtgacca tcattctgga ccctactcga 1380 attggactgt ggtgcatgat cttgaaagag aggggatttt gcacctctca gatatagacg 1440 ccactcctga gttgagctgc agtgatgtac tcccctgtgc gaaaatccat agttacggca 1500 gttgatatgg atgtaatagc tacacccaca ggttagatca attcgagatc gtcgaattgc 1560 tctcttcttg gcgaccctgt gttgaacctt gattgacgga ggagaacagt ggttctttga 1620 gggtgtagaa ttccgcattc tttgaagccc actgtttaag cgcagcattg ttctcttcat 1680 ccaagtactc tttataggag gacttgggac cagggttaca cagaaagatg gtggggatac 1740 cacctttaat tttagtgggc tccccgtact tgacgttaga ctgccagtct ctttgcgcgc 1800 ccatgaattc tttgaaatgt ttcaaataat gtggatcaac gtcatcgatg acgttgtacc 1860 atgcctcgtt agagtatgtt ttgtcgttta gatccaaatg gccgcaaaga taattatgag 1920 gaccaatggc acgtgcccac atggttttac ccgtgcgact atctccttca ataacgatac 1980 taataggtct atctggccgc gcagcgggat ctctcacatt tctttcagcc caagaagaaa 2040 tgtagcttgg aaccttgtta aatgactcca gtgtaaaagg cgactgatat gcctgtacag 2100 gctctgtgaa tatccgagac aaattacaat ttaagttatg aaattgtaaa ataaaatcct 2160 taggagcctt ttcctttaat ataaggaggg cctccaactt tgatccagag ttgagtgcct 2220 cggcgtatgc gtcgttggca gattggttac ctcctctagc tgatcggcca tcgatttgga 2280 aagttccatg atcaaggacg tctccgtctt tctccatgta tgatttaaca tctgagcagc 2340 ttttagctgc ctgaatgttc ggatggtaat atgccgatct gcatctggaa tggaggtcga 2400 agaacctttg gtttttcgtt tgttgtttcc cttcgaactg aagcagaaca tggagatgag 2460 gctgtccatc ttcatggagt tctcgacaga tgcggatgaa tttcttgtta actggtgttg 2520 acaaggctag aagttgctca agagcgtcct cctttgtaag aggacatttg ggatatgtca 2580 agaaatagtt ttttgcgttt atagcaaaac gaccttccct aggcatattt gaagtcgttt 2640 ttgtatcggt gtacaccgat tacttctcta tccccctatc ggtgtatcgg tgtcttatat 2700 atactagagc tactaaaagc ccataggggc actcagctat aatatt 2746 //