ID FM164724; SV 1; circular; genomic DNA; STD; VRL; 2776 BP. XX AC FM164724; XX DT 02-JUN-2009 (Rel. 101, Created) DT 02-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Okra yellow crinkle virus-[Cameroon] complete sequence, isolate NJ52 XX KW . XX OS Okra yellow crinkle virus-[Cameroon] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2776 RA Leke W.N.; RT ; RL Submitted (01-JUN-2008) to the INSDC. RL Leke W.N., Dept of Plant Biol and Forest Genetics, Swedish Univ of RL Agricultural Sciences, Box 7080, SE-750 07, Uppsala, SWEDEN. XX RN [2] RA Leke W.N., Bessem E.N., Njualem D.K., Titanji V.P., Legg J.P., RA Fondong V.N., Ngeve J.M., Zok S., Brown J.K., Kvarnheden A.; RT "Detection and molecular characterization of a strain of Okra yellow RT crinkle virus (OYCrV) and its associated DNA beta satellite in Cameroon"; RL Unpublished. XX DR MD5; 6e1bb38cd6f07b59aced702d5a03fb69. DR EuropePMC; PMC2839976; 20178575. XX FH Key Location/Qualifiers FH FT source 1..2776 FT /organism="Okra yellow crinkle virus-[Cameroon]" FT /host="Albelmucus esculentus" FT /isolate="NJ52" FT /mol_type="genomic DNA" FT /country="Cameroon:Njombe" FT /identified_by="W. N. Leke,D. K. NJUALEM,J.M. Ngeve,S. FT Zok,J. K. Brown ,A.Kvarnheden" FT /db_xref="taxon:627500" FT CDS 164..514 FT /gene="V1" FT /product="pre-coat protein" FT /db_xref="GOA:C5J4P5" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:C5J4P5" FT /protein_id="CAQ63427.1" FT /translation="MRDPLVNEFPESVHGFRCMLAIKYLQALEDTYEPNTLGSDLIRDL FT ISVIRAKNYVEATRRYNYFHARFEGSSKAELRQPLHEPCKCPHCPRHKQTSVMDLPANV FT QKAQNVPDVQKP" FT CDS 324..779 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:C5J4P6" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C5J4P6" FT /protein_id="CAQ63428.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRASVPTVLGTSKRRSW FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKIQSFDQRDSVTHTGNSRCLSDVTRGNGLTH FT RTGKRFVIKSVYILGKVWMDENVKKSNHTNTCMFWLVEIDSRFWTGI" FT CDS 781..1080 FT /gene="V2" FT /product="coat protein" FT /db_xref="GOA:C5J4P7" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:C5J4P7" FT /protein_id="CAQ63429.1" FT /translation="MFDNEPSTATVMNDKRDRYQVLKRFQATVTGGPSGCKEAAIVRRF FT FKINHHATYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIQMYFYDSVSN" FT CDS complement(1077..1481) FT /gene="C3" FT /product="replication enhancer protein" FT /db_xref="GOA:C5J4P8" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:C5J4P8" FT /protein_id="CAQ63430.1" FT /translation="MDSRTGELITARQTTNGVFIWETPNPLYFKITRHLIHPFNRPFHI FT IDVQIRFNYNLRKALGIHKCFLNFRVWTTLRPQTGRFLRVFRTQALKYLNNLGVISINL FT VIRAVAHVLYSVLLNTIDVTENHEIKFDIY" FT CDS complement(1222..1629) FT /gene="C2" FT /product="transcriptional activator protein" FT /db_xref="GOA:C5J4P9" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:C5J4P9" FT /protein_id="CAQ63431.1" FT /translation="MQHSSPSTSHSTQLPIKVQHRIAKKKVVRRRRIDLKCGCSYYLHI FT NCANHGFSHRGTHHCSSDNEWRFYLGDTKSPIFQDHKTPNTPVQPAVSHNRCPNPVQLQ FT PSEGIGDSQVFSQLQGLDDLTASDWSFLKGI" FT CDS complement(1538..2617) FT /gene="C1" FT /product="replication association protein" FT /db_xref="GOA:C5J4Q0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:C5J4Q0" FT /protein_id="CAQ63432.1" FT /translation="MAPPKRFKINSKNYFLTFPKCSLSKEEALEQLQNLQTPTNKKFIK FT ICKELHENGEPHLHVLIQFEGKYQCTNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGGCQTANDAAAEALNAGSVDAAMAIIREKLPKDFIFQYH FT NLKSNLDRIFQAPPEVYVSPFSSSSFNNVPEELEEWTAENVVGAAARPWRPQSIVVEGD FT SRTGKTMWARSLGPHNYLCGHIDLSPRVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTASYKEYLEEDKNAALKAWAIKNATFITLNEPL FT YSTTDQSPAPHSQEEGSEA" FT CDS complement(2203..2460) FT /gene="C4" FT /product="hypothetical protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:C0MHM8" FT /protein_id="CAQ63433.1" FT /translation="MGSLISTCSSSSKASTSAQISDSSTWSPQLGQHISIRTFRELSLA FT RTSSPTSTRTATPSNGENSRSTDEVLGEAARLLTTLQQRH" XX SQ Sequence 2776 BP; 745 A; 580 C; 626 G; 825 T; 0 other; accggtgggc gcgaaaaaaa aaagtggtcc ccgccccacg tggaccatgt cgcgcgagtg 60 cgaaatatgt cgcgcgatgc cgtccaatca taataaagcc tgaaagctat gttaatgaca 120 ttttgtcctt aaatacttcg gccccaagta ttaggtttgc aacatgcggg atccattagt 180 caacgagttc cccgaatctg tgcatgggtt tcgttgtatg cttgcaataa aatatttgca 240 ggctttagag gatacgtacg agcccaacac tttggggtct gatttaatta gagatttaat 300 atctgtgatt agagcgaaga attatgtcga agcgaccagg agatataatt atttccacgc 360 ccgtttcgaa ggttcgtcga aggctgaact tcgacagccc ttacacgagc cgtgcaagtg 420 tccccactgt cctaggcaca agcaaacgtc ggtcatggac ttaccggcca atgtacagaa 480 agcccagaat gtaccggatg tacaaaagcc ctgacgttcc tcgaggatgt gaaggtccat 540 gtaagatcca atcatttgat caacgtgact cagtaaccca tacaggtaat tcgagatgtc 600 taagtgatgt cacaagaggt aatgggctta ctcatcgtac aggtaaacgt tttgttatca 660 agtctgttta catattaggt aaggtttgga tggacgagaa tgttaagaag tccaatcaca 720 caaacacgtg tatgttctgg ttagtagaga tagactccag attttggaca ggtatttaat 780 atgtttgata acgagcccag cactgcaacg gttatgaacg acaagcgtga ccgttatcag 840 gttttaaaga ggtttcaagc aaccgtcact ggaggaccgt ctggttgcaa agaggctgct 900 attgttaggc gttttttcaa gataaaccat catgccactt ataatcatca ggaagctgcc 960 aaatatgaga accatacgga gaatgcttta ctactgtata tggcatgtac acatgcgtca 1020 aatccagtat atgcgagtct taaaatacaa atgtatttct atgattcagt cagcaattaa 1080 taaatatcga attttatttc atgattttct gttacatcta ttgtatttag tagtactgaa 1140 tacagaacat gggcaactgc cctaatcact aaattaattg aaattacacc caaattattt 1200 aagtatttta gagcctgtgt tctaaatacc cttaagaaac gaccagtctg aggccgtaag 1260 gtcgtccaga ccctgaagtt gagaaaacac ttgtgaatcc ccaatgcctt ccgaaggttg 1320 tagttgaacc ggatttggac atctattatg tgaaacggcc ggttgaacgg gtgtattagg 1380 tgtcttgtga tcttgaaata taggggattt ggtgtctccc agataaaaac gccattcgtt 1440 gtctgacgag cagtgatgag ttcccctgtg cgagaatcca tggttggcgc agtttatgtg 1500 taggtagtat gagcatccac acttgaggtc gattcgtcta cgcctcacta ccttcttctt 1560 ggctatgcgg tgctggactt tgatcggtag ttgagtagag tggctcgttg agggtgatga 1620 atgttgcatt tttaattgcc caggctttca atgcagcatt tttatcttct tcaagatatt 1680 ctttatagga agccgttggc ccaggattgc agaggaagat tgttgggata cctcctttaa 1740 tttgaattgg tttcccgtac ttcgtgttgc tctgccagtc cctttgggcc cccatgaatt 1800 ctttaaagtg tttgagataa tgcgggtcaa catcatctat gacgttatac catgcgtcat 1860 ttgaatagac ccttgggcta agatctatat gaccacataa ataattatgt gggcctaagg 1920 acctagccca cattgtcttc cctgttctac tatcaccctc caccactata ctttgaggtc 1980 tccagggccg cgcagcggca ccaacgacat tctcagctgt ccattcttct agttcttcgg 2040 gaacattatt aaaagaagaa gacgaaaaag gagaaacata aacttcgggc ggagcctgaa 2100 agattctatc taaatttgac tttaaattat gatattggaa aataaaatct ttagggagtt 2160 tttccctaat aattgccata gcagcatcaa cggaacctgc attcaatgcc tctgctgcag 2220 cgtcgttagc agtctggcag cctcccctag cacttcgtcc gtcgacctgg aattctcccc 2280 attcgagggt gtcgccgtcc ttgtcgatgt aggacttgac gtccgagcta gacttagctc 2340 cctgaatgtt cggatggaaa tgtgctgacc tagttgggga gaccaggtcg aagaatcgct 2400 gatttgtgca ctggtacttg ccttcgaact ggatgagcac gtggagatga ggctccccat 2460 tttcgtgtag ctccttgcag atctttatga atttcttgtt tgtaggtgtt tgtaggtttt 2520 gaagctgttc taatgcttcc tctttggata aggagcattt tgggaaagta aggaaatagt 2580 tttttgaatt tattttaaat cgtttgggag gagccattct ggtcaatgta ccccgattga 2640 ctgctcctct caaacttccc aggcaatcgg tgtaacgggg tacaatttat acttgtaccc 2700 caaatggcat tctcgtaatt ttagaaagtt acttacttta attcaaattc cccatagcgc 2760 ccaccgttct aatatt 2776 //