ID FM163373; SV 1; circular; genomic RNA; STD; VRL; 4752 BP. XX AC FM163373; XX DT 27-MAY-2008 (Rel. 95, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus genomic RNA, complete segment M, isolate LL-N.05 XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4752 RA Lopez C.; RT ; RL Submitted (23-MAY-2008) to the INSDC. RL Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14, RL 46022 Valencia, SPAIN. XX RN [2] RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2010). XX DR MD5; 44fab7162b8e1de4a54133eb721a07a9. XX FH Key Location/Qualifiers FH FT source 1..4752 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /isolate="LL-N.05" FT /mol_type="genomic RNA" FT /country="Spain" FT /isolation_source="Solanum lycopersicum" FT /collection_date="2005" FT /db_xref="taxon:3052585" FT CDS 101..1009 FT /gene="NSm" FT /product="non-structural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:B3GVV6" FT /protein_id="CAQ57662.1" FT /translation="MLTLFGNKGSSKSARKDEGPLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSARMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQALIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1261..4668) FT /gene="G1-G2" FT /product="glycoprotein precursor" FT /db_xref="GOA:B3GVV7" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:B3GVV7" FT /protein_id="CAQ57663.1" FT /translation="MRILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EVYDDSAENEVPTAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTKKT FT ISVSDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPVTKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTLSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPGENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKNKA FT PKEHSSECPILSKEIDHVYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLIILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESIFGTNIVIEG FT PNDCIENQNCAADPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRNGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRQSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENALFQADIQADLHNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YRFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVILLIAFIFLMIYFCSILTTICKGYVKNESYKSRSKIEDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4752 BP; 1511 A; 851 C; 854 G; 1536 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactc ttttcggtaa 120 taaggggtct tctaagtctg ccagaaagga tgaaggtcct ttagtttcac ttgctaaaca 180 taatggaaat gttgaagtct ctaagccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatgcatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ctatcacaga atcagagggt tatgatcttt ctgcaagaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 gaaacaaaac gcaaataagg tcatcaagat ctgtccaacc tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacggggaa 540 acttgtggtt gccctggtcg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaggggaca ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccgaa 660 aatgaataac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaagggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagataaaa gttgcatggt catacctcta aacagagcta ttagagctag 840 atctcaagca ctcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaatg 1020 tcacttattc aagcttaaat ttctgttaat tttgcatttt aaatcaaaaa ccaaaacaaa 1080 aaataaaaaa ggaaacaaaa aacaagaatg aaataaggct gaaaagccaa actttggtcc 1140 gaagactctt tttgttgttt tttgtttatt tgtatttttt gtttattttt tgtttattta 1200 tatatacata atctggctaa tgtggaggat tgaatcaaat ttagcctgtg acaagcagac 1260 tcagacaaga tgagagaaat ccataggtgg ccttcgtctt gtcattgtat ctttcattaa 1320 cataggggct ttgatctcag aatcatcatc atcctctatc ttggacctag atttataaga 1380 ttcattcttg acatatcctt tacaaatggt tgttagaata gaacagaaat aaatcataag 1440 gaaaatgaat gcaataagca atatcactct gatagtatca aagaatgagc caaaataact 1500 tgcaatgaaa ttgaatgggc ttttaatata atcccagaag ccccatgctg aagaatcaga 1560 attatattgt tgttcttcat gagcatactc atcattttga tctattatgt tctctggttc 1620 ttctacaata acattattga ccagaacttc tacagaaata tccggattgc cttctggata 1680 caacgtcatt ttcttcttgt ccggattagc agaacaaaac attgttatgt tgtatttatt 1740 agatcctttt ttaacagcca gctgataagt agatagagag caagcatcta tagaaattgc 1800 agtagaaaat gtcaaatctg agaaaaattc taaaatgcaa gataaacctt gaccgcatag 1860 aagacagccg ttgcaattta agcttgttga ggttatggaa ggtctcttag gagcaacttt 1920 aaaaagatca gatggaagat caacgacaat cttgagtttc cctaaactga aagctttttc 1980 caagaaaaaa ctagagaaat ctttgaaact aacgggaata tctgatattt gttctaaacc 2040 agatctaaat ctgtatgtat catatccaca cgttttaata gtgattgatt ttttccctat 2100 tgctgcacaa tcccaagaca tgtcatctcc ttctagagtt ttcttagtaa aaataggcac 2160 tccatcatga gttaattgtg ggtgaccaaa cattttcaca ggatcattca agtttgcaat 2220 atttccagaa taaatatggc tgtcaggtcc atgagctatc agttcaccta tagtgatacc 2280 atcattgtgc aaatctgctt gtatatcagc ttgaaacaag gcattttcat aaggaacctc 2340 ttcggtaatc cttgagcact gacctcccaa aataccagaa atacaaacat ctgccactat 2400 agttgatttt agcaccgaat aaattctgta tgatttatcc atgtcataga tattccgaca 2460 gaatccgcat gtagcacctt cattaattgc aaaacaccaa gcttcttcac atccccaata 2520 agaagttggt gttatacaaa aatcttggaa accagttaaa gcttgatttt ttctgcaagt 2580 gtcacagttt cctgtacaag tggaataaaa atctgtgtgg gtgctttgga taggagctgt 2640 cgtgtatttt tctgacactt cataatgaat tcccacactt ttgatataaa tcacaaattt 2700 ttttgctgtt tctgaggtct tatcatttaa catgaatata gtccctcctc ctcctaaaag 2760 agactgttct atcatgtatc tatatttccc gtctacaaca gaatcaaaga tcaatgattg 2820 tctaggcaga atgttctctg gtatgcttgt ttcgtttttg tttagagaat ctcctgcaat 2880 cattccagaa attttatctg tacgattata agaatctatt ataccattcc tcaatctctt 2940 agcctcatac agaccaaccg atgttaaccc taaagagctt cctgtataat ctgaaaaccc 3000 attatacaaa ggtttgttcc gaaataaatc taggtactcg caacccagtc tgcattttat 3060 aagattatca atagatgggt ctgcagcaca attctggttc tctatgcaat cattaggacc 3120 ttctataaca atgttagtgc caaagatact ttctataatc ttatcttctt tcacattaca 3180 gtaacattga tctttttctg ggcatttttc aaatttgctt gtaaccaaaa atggacagcc 3240 tgggacataa aaacatccac tcaaacattg ggtagtttga gccatagaca tgggcatttg 3300 agacaagatg atcaaaccta ttaagatttc agtcacaaat ttcaacaaac taaagctcag 3360 cttagtgttc actattagat ggaaccattc catgctagtc cacttgtgtt tgttgtagac 3420 atgatctatt tctttggaca atatgggaca ctctgaagaa tgttcttttg gagctttgtt 3480 tttgttgcag atgcaaattt tagtacattc atgtgtgatt atgcacaaat tgccacagtt 3540 agaacattta aatggaaaat atttccataa gcaatttatg agcagcaaaa tagggtatgt 3600 gatcaagccc ataagatcat accagagaaa gaggggtttg gttgtcttgt ttactaacca 3660 ccggataggg aaatagatca acaaagctat caatattagt cttatccaag aaaaattgat 3720 gcaagctgtt tgtttataaa tgctttttga atatttgatt atgcaatctc taactctttt 3780 gtttgttttt ggtattttag ctgatttgtc accgcacaag agattgtgct caccatccaa 3840 catttcttca gtaaaagtga tgcttgctga tccagaaaag gatatgacct tgtgttccac 3900 attttcacca ggctttttta tcaaataacc catgatcttc tcggggctag tgatgctaac 3960 agtataggga ttggcaaagt ttgatttggt tattttgcaa tcgccagata actttacagt 4020 ttgtaatgat aatgttccat tagtagggta cgagttataa gttataggat aattatcttg 4080 tgtcaggctt tctgaaatga agaattttgt tccaactgaa aaatgccttt tgttgtcaag 4140 tttggtaacg ggaataaccg ggactttgga gaatctcttt ggcagattta aagaattgtc 4200 acatttttct aaaccttccg ctgaatcaga aacacaggaa tatatgacac cattgttttc 4260 cacttgatag taaacattat aagtggatat cccttttatc tcacatttta atgaagaagc 4320 attcaagcag ttgttaggaa gatccgaaac agagattgtt tttttcgtag ttgactcagc 4380 aaaaataggg atggttgatt cttcttctcg tatctgacgg gttccaggag tctgagattc 4440 tagcatcaga ttagtcaaag tctccaagat agccttgcgt tgaatcgatg cagcagtagg 4500 tacttcattc tcagcagaat catcatagac ctcaggatgg tctccacgaa ttatttctac 4560 tttggcatct gtggctctga agatcaagaa tgccaacaag acagaactca gggcaattgt 4620 gaaaagactc acttttacca ctagttctag tagttttaaa attctcatct tagacgtctg 4680 ctcagattat aatggttata tgattaattt caagatgtct ggattaaggt ttttgtttgc 4740 actgattgct ct 4752 //