ID FM163372; SV 1; circular; genomic RNA; STD; VRL; 4753 BP. XX AC FM163372; XX DT 27-MAY-2008 (Rel. 95, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 3) XX DE Tomato spotted wilt virus genomic RNA, complete segment M, isolate ZO XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-4753 RA Lopez C.; RT ; RL Submitted (23-MAY-2008) to the INSDC. RL Lopez C., COMAV, Universidad Politecnica de Valencia, Camino de Vera 14, RL 46022 Valencia, SPAIN. XX RN [2] RA Lopez C., Aramburu J., Galipienso L., Soler S., Nuez F., Rubio L.; RT "Evolutionary analysis of tomato Sw-5 resistance breaking isolates of RT Tomato spotted wilt virus"; RL J. Gen. Virol. 92(1):210-215(2010). XX DR MD5; 3825318c61d740a5e3b387ea878ecfa2. XX FH Key Location/Qualifiers FH FT source 1..4753 FT /organism="Orthotospovirus tomatomaculae" FT /segment="M" FT /isolate="ZO" FT /mol_type="genomic RNA" FT /country="Spain" FT /isolation_source="Solanum lycopersicum" FT /collection_date="2002" FT /db_xref="taxon:3052585" FT CDS 101..1009 FT /gene="NSm" FT /product="non-structural protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:B3GVV4" FT /protein_id="CAQ57660.1" FT /translation="MLTLFGNKGSSKSARKDEGLLVSLAKHNGNVEVSKPWSSSDEKLA FT LTKAMDASKGKILLNTEGTSSFGTYESDSITESEGYDLSAKMIVDTNHHISNWKNDLFV FT GNGKQNANKVIKICPTWDSRKQYMMISRIVIWVCPTIPNPTGKLVVALVDPNMPSEKQV FT ILKGQGTITDPICFVFYLNWSIPKMNNTPENCCQLHLMCSQEYKKGVSFGSVMYSWTKE FT FCDSPRADKDKSCMVIPLNRAIRARSQAFIEACKLIIPKGNSEKQIKKQLKELSSNLER FT SVEEEEEGISDSVAQLSFDEI" FT CDS complement(1262..4669) FT /gene="G1-G2" FT /product="glycoprotein precursor" FT /db_xref="GOA:B3GVV5" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:B3GVV5" FT /protein_id="CAQ57661.1" FT /translation="MKILKLLELVVKVSLFTIALSSVLLAFLIFRATDAKVEIIRGDHP FT EVYDDSAENEVPAAASIQRKAILETLTNLMLESQTPGTRQIREEESTIPIFAESTTKKT FT ISVSDLPNNCLNASSLKCEIKGISTYNVYYQVENNGVIYSCVSDSAEGLEKCDNSLNLP FT KRFSKVPVIPVTKLDNKRHFSVGTKFFISESLTQDNYPITYNSYPTNGTVSLQTVKLSG FT DCKITKSNFANPYTVSITSPEKIMGYLIKKPSENVEHKVISFSGSASITFTEEMLDGEH FT NLLCGDKSAKIPKTNKRVRDCIIKYSKSIYKQTACINFSWIRLILIALLIYFPIRWLVN FT KTTKPLFLWYDLMGLITYPILLLINCLWKYFPFKCSNCGNLCIITHECTKICICNKSKA FT SKEHSPECPILSKEIDHVYNKHKWTSMEWFHLIVNTKLSFSLLKFVTEILIGLIILSQM FT PMSMAQTTQCLSGCFYVPGCPFLVTSKFEKCPEKDQCYCNVKEDKIIESTFGTNIVIEG FT PNDCIENQNCAADPSIDNLIKCRLGCEYLDLFRNKPLYNGFSDYTGSSLGLTSVGLYEA FT KRLRSGIIDSYNRTDKISGMIAGDSLNKNETSIPENILPRRSLIFDSVVDGKYRYMIEQ FT SLLGGGGTIFMLNDKTSETAKKFVIYIKSVGIHYEVSEKYTTAPIQSTHTDFYSTCTGN FT CDTCRKNQALTGFQDFCITPTSYWGCEEAWCFAINEGATCGFCRNIYDMDKSYRIYSVL FT KSTIVADVCISGILGGQCSRITEEVPYENALFQADIQADLQNDGITIGELIAHGPDSHI FT YSGNIANLNDPVKMFGHPQLTHDGVPIFTKKTLEGDDMSWDCAAIGKKSITIKTCGYDT FT YKFRSGLEQISDIPVSFKDFSSFFLEKAFSLGKLKIVVDLPSDLFKVAPKRPSITSTSL FT NCNGCLLCGQGLSCILEFFSDLTFSTAISIDACSLSTYQLAVKKGSNKYNITMFCSANP FT DKKKMTLYPEGNPDISVEVLVNNVIVEEPENIIDQNDEYAHEEQQYNSDSSAWGFWDYI FT KSPFNFIASYFGSFFDTIRVVLLIAFIFLMIYFCSILTTICKGYVKNESYKSRSKIEDD FT DDSEIKAPMLMKDTMTRRRPPMDFSHLV" XX SQ Sequence 4753 BP; 1515 A; 854 C; 849 G; 1535 T; 0 other; agagcaatca gtgcatcaga aatataccta ttatacactt tgctaagaat caatcaatta 60 cattacacaa gctcctctac cttaggctgt tgaactcaaa atgttgactc ttttcggtaa 120 taaggggtct tctaagtctg ccagaaagga tgaaggtctt ttagtttcac ttgctaaaca 180 taatggaaat gttgaagtct ctaagccatg gtcttcttct gatgaaaagc ttgctttgac 240 taaagctatg gatgcatcca aaggaaagat actgttgaac acagagggaa catcttcctt 300 tggaacctat gaatctgatt ccatcacaga atcagagggt tatgatcttt ctgcaaaaat 360 gatagtagat acaaaccatc atatctcaaa ctggaaaaat gatctttttg ttggcaacgg 420 gaaacaaaac gcaaataagg tcatcaagat ctgtccaacc tgggacagca gaaaacaata 480 catgatgatt tccaggattg tgatatgggt ctgccccact ataccaaacc ctacggggaa 540 acttgtggtt gccctggtcg atcccaacat gccatctgaa aagcaagtca ttctgaaggg 600 tcaggggaca ataactgatc ctatatgttt tgtcttttat ctgaactggt ctattccgaa 660 aatgaataac actccagaaa actgctgtca gctgcatttg atgtgcagcc aagaatacaa 720 gaagggggtt tcttttggta gtgtcatgta ttcttggaca aaggagtttt gtgattcacc 780 cagagctgat aaagataaaa gttgcatggt catacctcta aacagagcta ttagagctag 840 atctcaagca ttcattgagg cttgcaagct gataattcct aaaggaaaca gtgagaagca 900 gattaaaaaa cagcttaaag aattgagctc aaatcttgag agatcagttg aagaagaaga 960 ggaagggatt tctgatagtg ttgctcagtt atcttttgat gaaatatagt acttttaatg 1020 tcacttattc aagcttaaat ttctgttaat tttgcatttt aaatcaaaaa ccaaaacaaa 1080 aaataaaaaa gaaaaacaaa aaacaaaaat gaaataaggc tgaaaagcca aactttggtc 1140 cgaagactct ttttgttgtt ttttgtttat ttgtattttt tgtttatttt ttgtttattt 1200 atatatacat aatctggcta atgtggaaga ttgaatcaaa tttagcctgt gacaagcaga 1260 ctcagacaag atgagagaaa tccataggtg gccttcgtct tgtcattgta tctttcatta 1320 acataggggc tttgatctca gaatcatcat catcctctat cttggaccta gatttataag 1380 attcattctt gacatatcct ttacaaatgg ttgttagaat agaacagaaa taaatcataa 1440 ggaaaatgaa tgcaataagc aataccactc tgatagtatc aaagaatgag ccaaaataac 1500 ttgcaatgaa attgaatggg cttttaatat aatcccagaa gccccatgct gaagaatcag 1560 aattatattg ttgttcttca tgagcatact catcattttg atctattatg ttctctggtt 1620 cttctacaat aacattgttg accagaactt ctacagaaat atccggattg ccttctggat 1680 acaacgtcat tttcttcttg tccggattag cagaacaaaa cattgttatg ttgtatttat 1740 tagatccttt tttaacagcc agctgataag tagatagaga gcaagcatct atagaaattg 1800 cagtagaaaa tgtcaaatct gagaaaaatt ctaaaatgca agataaacct tgaccgcata 1860 gaagacagcc gttgcaattt aagcttgttg aggttatgga aggtctctta ggagcaactt 1920 taaaaagatc agatggaaga tcaacgacaa tcttgagttt ccctaaactg aaagcttttt 1980 ccaagaaaaa actagagaaa tctttgaaac taacgggaat atctgatatt tgttctaaac 2040 cagatctaaa tttgtatgta tcatatccac acgttttaat agtgattgat tttttcccta 2100 ttgctgcaca atcccaagac atgtcatctc cttctagagt tttcttagta aaaataggca 2160 ctccatcatg agttaattgt gggtgaccaa acattttcac aggatcattc aagtttgcaa 2220 tatttccaga ataaatatgg ctgtcaggtc catgagctat cagttcacct atagtgatac 2280 catcattttg caaatctgct tgtatatcag cttgaaacaa ggcattttca taaggaacct 2340 cttcggtaat ccttgagcac tgacctccca aaataccaga aatacaaaca tctgccacta 2400 tagttgattt tagcaccgaa taaattctgt atgatttatc catgtcatag atattccgac 2460 agaatccgca tgtagcacct tcattaattg caaaacacca agcttcttca catccccaat 2520 aagaagttgg tgttatacaa aaatcttgga aaccagttaa agcttgattt tttctgcaag 2580 tgtcacagtt tcctgtacaa gtggaataaa aatctgtgtg ggtgctttgg ataggagctg 2640 tcgtgtattt ttctgacact tcataatgaa ttcccacact tttgatataa atcacaaatt 2700 tttttgctgt ttctgaggtc ttatcattta acatgaatat agtccctcct cctcctaaaa 2760 gagactgttc tatcatgtat ctatatttcc cgtctacaac agaatcaaag atcaatgatc 2820 gcctaggcag aatgttctct ggtatgcttg tttcgttttt gtttagagaa tctcctgcaa 2880 tcattccaga aattttatct gtacgattat aagaatctat tataccactc ctcaatctct 2940 tagcctcata cagaccaacc gatgttaacc ctaaagagct tcctgtataa tctgaaaacc 3000 cattatacaa aggtttgttc cgaaataaat ctaggtactc gcaacccagt ctgcatttta 3060 taagattatc aatagatggg tctgcagcac aattctggtt ctctatgcaa tcattaggac 3120 cttctataac aatgttagtg ccaaaggtac tttctataat cttatcttct ttcacattac 3180 agtaacattg atctttttct gggcattttt caaatttgct tgtaaccaaa aatggacagc 3240 ctgggacata aaaacatcca ctcaaacatt gggtagtttg agccatagac atgggcattt 3300 gagacaagat gatcaaacct attaagattt cagtcacaaa tttcaacaaa ctaaagctca 3360 gcttagtgtt cactattaga tggaaccatt ccatgctagt ccacttgtgt ttgttgtaga 3420 catgatctat ttctttggac aatatgggac actctggaga atgttctttt gaagctttgc 3480 ttttgttgca gatgcaaatt ttagtacatt catgtgtgat tatgcacaaa ttgccacagt 3540 tagaacattt aaatggaaaa tatttccata agcaatttat gagcagcaaa atagggtatg 3600 tgatcaagcc cataagatca taccagagaa agaggggttt ggttgtcttg tttactaacc 3660 accggatagg gaaatagatc aacaaagcta tcaatattag tcttatccaa gaaaaattga 3720 tgcaagctgt ttgtttataa atgctttttg aatatttgat tatgcaatct ctaactcttt 3780 tgtttgtttt tggtatttta gctgatttgt caccgcacaa gagattgtgc tcaccatcca 3840 acatttcttc agtaaaagtg atgcttgctg atccagaaaa ggatatgacc ttgtgttcca 3900 cattttcact aggctttttt atcaaataac ccatgatctt ctcggggcta gtgatgctaa 3960 cagtataggg attggcaaag tttgatttag ttattttgca atcgccagat aactttacag 4020 tttgtaatga tactgttcca ttagtagggt acgagttata agttatagga taattatctt 4080 gtgtcaggct ttctgaaatg aagaattttg ttccaactga aaaatgcctt ttgttgtcaa 4140 gtttggtaac gggaataacc gggactttgg agaatctctt tggcagattt aaagaattgt 4200 cacatttttc taaaccttcc gctgaatcag aaacacagga atatatgaca ccattgtttt 4260 ccacttgata gtaaacatta taagtggata tcccttttat ctcacatttt aatgaagaag 4320 cattcaagca gttgttagga agatccgaaa cagagattgt ttttttcgta gttgactcag 4380 caaaaatagg gatggttgat tcttcttctc gtatctgacg ggttccagga gtctgagatt 4440 ctagcatcag attagtcaaa gtctccaaga tagccttgcg ttgaatcgat gcagcagcag 4500 gtacttcatt ctcagcagaa tcatcataaa cctcaggatg gtctccacga attatttcta 4560 ctttggcatc tgtggctctg aagatcaaga atgccaacaa gacagaactc agggcaattg 4620 tgaaaagact cacttttacc actagttcta gtagttttaa aattttcatc ttagacgtct 4680 gctcagatta taatggttat atgattaatt tcaagatgtc tggattaagg tttttgtttg 4740 cactgattgc tct 4753 //