ID FJ971717; SV 1; linear; genomic RNA; STD; VRL; 5834 BP. XX AC FJ971717; XX DT 18-JUN-2009 (Rel. 101, Created) DT 18-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Beet soil-borne virus isolate PL segment RNA 1, complete sequence. XX KW . XX OS Beet soil-borne virus OC Viruses; Riboviria; Virgaviridae; Pomovirus. XX RN [1] RP 1-5834 RA Borodynko N., Rymelska N., Hasiow-Jaroszewska B., Pospieszny H.; RT "Full length genome sequence of Polish Beet soil-borne virus confirm low RT level of genetic diversity in virus population"; RL Unpublished. XX RN [2] RP 1-5834 RA Borodynko N., Rymelska N., Hasiow-Jaroszewska B., Pospieszny H.; RT ; RL Submitted (28-APR-2009) to the INSDC. RL Virology and Bacteriology, Institute of Plant Protection, National Research RL Institute, Wegorka 20, Poznan 60-318, Poland XX DR MD5; 980f7da50436cfbb56fe1003f2b815dc. DR RFAM; RF00233; Tymo_tRNA-like. DR RFAM; RF01072; TMV_UPD-PK3. XX CC GenBank Accession Numbers FJ971717-FJ971719 represent the complete CC genome of Beet soil-borne virus. XX FH Key Location/Qualifiers FH FT source 1..5834 FT /organism="Beet soil-borne virus" FT /segment="RNA 1" FT /host="sugar beet" FT /isolate="PL" FT /mol_type="genomic RNA" FT /country="Poland" FT /db_xref="taxon:46436" FT CDS 130..5466 FT /codon_start=1 FT /transl_except=(pos:3940..3942,aa:OTHER) FT /product="204 kDa protein" FT /note="BSBVs1gp1; putative readthrough protein; putative FT virus replication" FT /db_xref="GOA:C5IXG8" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C5IXG8" FT /protein_id="ACS14040.1" FT /translation="MESTNILTQINRDDIIQAVLTTSASRTQSALHETLCRVIDDNIKN FT ALKANTKKKTIDVKRNLSEEQVQYLCELYPERKIITSNSERGTHSMAAAMRKIETDLVL FT SLFPKNSVIYDIGGNWATHAKCNDGRKVHCCCPILDYRDAQRKMTRMLNFHKFISDSSE FT IPPDIREKAEMIAEDNAIITANVREGDLNSSALNGRWFCQNKFEDCVFDPRDILMGKTA FT KDNVMVYAMAIHSIYDINVYELATALQRKGIKRMVGTFLFSVDMLLGRKSGELPSVNGF FT YKLEGEYIKYGFYDDPNCGYRHKFSSLKAYLTKTFVKAANGSVFYLELTDLRGDVMYFT FT MTDATEARASGIMKDESFKCIPVDAKNKVVFPLFVVDETTDTLMFLERILPKDFVHRAI FT EYVNRCKENQLTVESIVSYLSSTNNAVIIGGSARKVEEKVDPSLLPMIASTLLVYSEMQ FT RAKQKTVIQKLRIHVKNTVTIGDLLNHAFHKVFGAVGVGQLALQSFARWLKFFHGSGVI FT EMNDLFMYVEIEDRIRLWSKKSREHEFFLTFDDLTEKSRLYEEYNEERRRISDKIIKEK FT GLSSKDLSLEEDKEKTVDEILAWMEKSEDLKASELRSKLIGIRKNRARVDKRKFGEAHQ FT VNTAVLQRFIEADDDHFSTCALNTPGKWWVDILGEFLGKTLSEVCATNIVFSDIEPNDN FT TEGFDTVEYADRDDMASDVETSISQCVESNDECVDEDGYSCDGDSKVEHSTLNSNYGAL FT TPPPREEVKDSEEGVDVTVEDVSTDIIESHCDGRWALMAEDSDFAIDQKRSEALNIMEV FT RYAKLPSKPDYLESDDFRMRAKKEFIWYLECKLVSDKSAMTDIVRDYVYNMYHNSLCEF FT PKNSCFLSYEGDDNGNWVWGRKPVRLGHAYAVHFYAADWKTDCRLVSLSWNKDEEGNFV FT GDKPVISTNSGVYMLCDLTFLMNEMIILKNLQFSLKTRFQKHIPHVTLIDGVPGCGKST FT HIVKEARLENQYVLTMGREAAAELRERFKTVRGSTEEQLKRVRTVDSFLMNDKDSRAKV FT LHFDEALMAHAGMVYFCADNLSARTIICQGDSQQIPFINRVESITLEYAKLEITNVVEK FT RLTYRSPLDVACFLTRKNFYGHFHCYERKSNGRSMSVVGPRDGMTSNYSIPKKKGAQYL FT TFTQSEKEDIVRYLGKGQWSVNTVHESQGKTYDDVILVRLKPTDNEIYPGGRKSKPYVV FT VGTTRHRRSLVYYTRAEDILYRDITEMMSVQEGKLHKHLFTENTQXRCGSKYESITVSD FT RPVSVPDVGAVEDLQVMYDIAFPGNSVIETYFDGYDVATGGLEIDIANIKYYPNKQRRM FT WQEVRGLTPALRTAMPEKRQSGLIESVLALNKRNMAAPKLQESVNEFEIIENVISKAKT FT VFFDEKFIDASPMNSVSNCQKWWDKQSVTAQKQMLADTRIISEIDLCTYNFMIKNDVKP FT KLDLSPQSEYSALQTVVYPDKIVNAIFGPVMKEINERILLALRPHVVYNTRMTAEELDR FT SVEFLDVREQYDAVEIDFSKFDKSKTSLHIRAVIELYKIFGLDDMLAFLWEKSQCQTTI FT RDRQNGLIAHILYQQKSGNCDTYGSNTWSAALALLDALPLERAKFMVFGGDDSLVFFPK FT NMNLADPCGRLASLWNFDCKFFNFQNNMFCGKFLLKIGENYKFAPDPFKLLTKLGRKDI FT KNDILLSEIFISISDNYRSYHDYRVLEALNVAVVERYKLSQDVLFGLCALKKYLFNFDL FT FRTLFSYKGKLHCTNVSRNFEW" XX SQ Sequence 5834 BP; 1726 A; 921 C; 1362 G; 1825 T; 0 other; gtattatttt ctcaacggtt atttaccaaa gagaagattt ctataccatt aattttgaga 60 agtctgcttt ttagcaataa atcttttcat attattggtt tgtcttttta tttttacgaa 120 aattctacga tggaatctac aaacattctg acgcaaatta atcgtgatga tataattcag 180 gccgtattaa ctacaagtgc gagtaggact cagtctgctt tacatgaaac tttgtgtagg 240 gtgattgatg ataatattaa gaatgctctt aaagctaaca caaaaaagaa aacaattgat 300 gtgaaacgaa acttgtctga agaacaggtt cagtatttat gtgagcttta tcctgaaaga 360 aaaataatta catctaattc tgaacgtggt actcatagta tggctgcggc tatgcgaaaa 420 attgaaacgg atttagtttt gtcactgttt cctaagaata gcgttatata tgatattggt 480 ggtaattggg cgacgcacgc taagtgtaat gatggaagga aagtgcattg ttgctgtccg 540 atattggact atcgtgatgc gcagaggaag atgacgcgga tgttaaactt tcataagttt 600 atcagcgatt cttctgagat acctcctgat atcagagaaa aagcggagat gatagccgag 660 gacaacgcca ttataactgc aaatgtgcgg gaaggtgatc tgaattcttc tgctttgaac 720 ggacgttggt tttgccaaaa caagtttgaa gactgtgttt ttgatccgcg tgacattttg 780 atgggtaaga ctgctaaaga taatgtaatg gtttatgcca tggcaattca cagtatttat 840 gatataaatg tttatgaatt ggctacggcg ttacagcgaa aaggaataaa gcggatggta 900 ggtacttttc tgttttctgt ggacatgttg ctcggaagaa aaagtggtga attgccatct 960 gttaacgggt tttataagtt ggaaggtgaa tatataaaat acgggtttta cgacgatcca 1020 aattgcggtt acagacataa gttttcttcg cttaaggctt acttaacaaa gacttttgtt 1080 aaagcagcga atggttccgt gttttacctg gagttgactg atttaagggg tgacgtaatg 1140 tattttacta tgacagatgc tacagaggcg cgggcttccg gtattatgaa agatgagtcg 1200 ttcaagtgca ttccagtgga cgcaaaaaac aaggtagttt ttcctttgtt tgttgtagat 1260 gaaactactg acacacttat gtttctcgaa cgcatattgc caaaagattt cgtgcatcgc 1320 gctattgagt atgtcaatcg ttgcaaagag aatcagttaa cggttgaaag tattgttagt 1380 tatttatcgt ctactaataa tgccgtgata attggtgggt ctgcgagaaa agtggaagag 1440 aaggtggatc cttctttgct accgatgatc gcctccactt tgttagttta cagtgaaatg 1500 cagagagcta aacagaagac tgttattcaa aagctgagaa ttcatgtgaa gaatacagtt 1560 actatcggtg atttgttgaa ccacgctttc cataaggtgt tcggcgccgt tggtgtcggt 1620 cagttggcgc tgcagagctt tgctagatgg ttaaagtttt ttcatggctc aggggttatc 1680 gagatgaatg acctttttat gtacgtggag attgaagacc gtattaggtt atggtctaag 1740 aaatctcgag agcacgaatt cttcctaacc tttgatgatc tgacagaaaa aagtcgtttg 1800 tacgaagagt acaacgaaga gagacgtagg atttctgaca agatcattaa ggaaaaaggt 1860 ttgagttcta aagacctttc tttggaagaa gataaggaaa agacggtaga tgaaattctg 1920 gcctggatgg agaaatctga agatttgaag gcttcggaat tgcgttctaa gttaataggg 1980 attcgaaaga atcgtgcacg tgttgataaa cgaaagtttg gtgaggcgca tcaggtaaat 2040 acggctgtat tgcagaggtt tatcgaagcg gatgacgatc acttttccac gtgtgcttta 2100 aatactccag gcaagtggtg ggttgatatc ctgggtgaat ttttaggaaa gacattatca 2160 gaggtttgtg ctactaatat tgttttttct gatatagaac ccaatgataa cactgaaggt 2220 tttgatactg ttgaatatgc tgatagagac gatatggcta gcgatgtcga aacgtcgatt 2280 agtcagtgcg tcgagtccaa cgatgagtgt gtagacgaag atggttacag ttgcgacggt 2340 gattccaaag ttgagcattc tactttaaac agtaattatg gtgcgttgac gccacctcct 2400 agagaagagg taaaagattc agaggagggc gttgatgtga cagttgaaga cgtatctacg 2460 gatataattg agtcgcattg tgatggaaga tgggcattga tggcggaaga ttctgatttc 2520 gccattgacc agaagcgatc cgaggcgcta aatattatgg aagttagata tgctaaatta 2580 ccgtctaaac cagattactt agaaagtgat gattttagaa tgcgggcaaa gaaagagttt 2640 atctggtact tagaatgtaa gttggtttca gataagtctg caatgactga tattgtgcga 2700 gattatgttt ataacatgta ccataacagt ctttgcgagt ttccgaaaaa ttcttgcttt 2760 ctaagttacg aaggtgatga caacggtaat tgggtttggg gcaggaaacc ggttaggttg 2820 ggccacgctt acgctgttca cttttatgcc gctgattgga agactgactg tcgacttgta 2880 agtttgtcat ggaacaaaga cgaggaagga aatttcgttg gcgataagcc cgttatttct 2940 actaattccg gagtttacat gctatgcgat ttgacatttt taatgaatga aatgatcatt 3000 ttgaaaaatt tgcagttttc gttgaagacc aggtttcaga agcatattcc acacgttaca 3060 cttattgatg gtgtacctgg gtgtggtaaa tcaactcata ttgttaaaga agctagactg 3120 gaaaaccagt acgtactcac tatgggtcga gaagcagctg cagagttgcg agagcgattt 3180 aaaactgtac gcggttcgac cgaagaacag ttgaaaagag tgcggactgt tgattctttt 3240 ttgatgaacg ataaggactc tagggccaaa gttttgcatt tcgacgaggc attgatggcg 3300 catgctggta tggtttactt ttgtgcagat aatttgtctg ctcggacaat tatttgtcaa 3360 ggtgattctc agcagatacc atttattaac cgcgttgaat ccataacttt ggaatacgcc 3420 aagttagaaa taactaacgt ggtggagaaa agacttacct atcgttcccc tttggacgtt 3480 gcctgttttc tgacaaggaa aaatttttat gggcacttcc actgttatga gcgcaaatcc 3540 aacggacgtt ctatgagcgt tgttggtccc cgagatggca tgacgtctaa ctacagtatt 3600 cctaagaaga aaggtgcaca atacctcact tttactcaaa gtgagaagga agacatagtc 3660 cgttacctgg gtaagggaca gtggtctgta aacactgtac atgaaagtca aggaaaaact 3720 tacgatgatg ttatattagt taggttaaag cctactgata atgaaattta tcctggtggg 3780 cggaaatcaa aaccttacgt cgtagttggt actacgcggc atagacgcag tttagtgtac 3840 tacacacgtg ctgaggacat tctgtacaga gatataactg aaatgatgag tgtgcaagaa 3900 ggaaaattgc acaaacattt gttcacggag aatactcaat aacggtgtgg gtcgaagtac 3960 gagtcgataa ccgtttccga tcgtccggta agtgttccag acgttggagc tgttgaagat 4020 ttgcaggtta tgtatgacat tgcttttcct ggcaattcgg ttattgagac gtatttcgac 4080 gggtacgatg ttgctacggg aggtttagaa atagatattg ctaatataaa atattatccc 4140 aacaagcaaa ggcgaatgtg gcaagaagtt cgcggactta cacctgcttt gcgaactgct 4200 atgccggaga aaaggcagag cggtttgata gagagcgttc tggcgcttaa taagagaaat 4260 atggctgctc ctaagttaca ggaatcggtt aacgaattcg agattattga gaatgtcatt 4320 tctaaggcta aaactgtttt cttcgatgag aaatttattg atgcatctcc gatgaactcc 4380 gtatcaaatt gtcaaaaatg gtgggataaa cagtcagtga ccgcgcagaa acagatgttg 4440 gcggatacta gaattatatc cgaaattgac ttgtgcacat ataacttcat gataaaaaat 4500 gatgttaagc ctaagttgga tttgtcgcca cagtcggagt attctgcatt acaaacagtt 4560 gtctatccgg ataaaattgt taatgctatt tttggtcctg tgatgaagga gataaacgaa 4620 agaatattgt tagcgttgcg gcctcatgtt gtgtataaca caaggatgac agccgaagaa 4680 ctagataggt ccgttgaatt tctcgacgtt cgcgaacaat acgatgctgt tgagattgat 4740 ttttctaaat ttgataaatc aaaaacttct ttacacatta gggcagtgat agaattatac 4800 aagatttttg gccttgacga tatgttagct ttcttatggg agaagtcaca atgtcagact 4860 acaattcgtg atcgtcagaa tggactgatt gcgcatatac tttatcaaca aaaatctggt 4920 aactgtgata catatggttc taatacttgg tcggctgctc ttgctctttt ggatgcgtta 4980 ccacttgagc gagctaagtt catggtattt ggcggtgatg attctcttgt gtttttccca 5040 aaaaatatga atttggctga cccttgtggt aggttggctt ctctttggaa tttcgattgt 5100 aaatttttca actttcaaaa caacatgttt tgtggtaagt ttcttttaaa aattggagaa 5160 aattataagt ttgcgccgga tccttttaaa ttacttacaa aacttggtag gaaagatatc 5220 aaaaacgata ttttgcttag tgaaattttt atttctataa gcgataatta ccgttcttat 5280 catgactaca gagttttaga agctttaaac gtggcggttg tcgaacgtta taaattatct 5340 caagacgttt tgtttggttt gtgtgcttta aaaaaatact tgtttaactt tgatttattc 5400 cgcacacttt tctcttataa aggcaaatta cactgcacta acgtgagtag aaattttgaa 5460 tggtaaaatt tctttggttc tccgttttgt gagtttaaga tcattatttt gtgtaatttg 5520 gtgtgaagag atacagtcta tttgcacttg taaatgatta tttgagctga tcactcaacg 5580 tggatttcac gatagaaatc ggtgtttttc attccacata aatcgacatg tactacggta 5640 gcgcgaacct tatcgcggag tgttttgaag tccacttaaa tagaacttct ttccatggtc 5700 tctttcgcta ctgaattaat tagaaaaact tcagtattcg atttatgcag atgagagtag 5760 tatctctcga tcatcaagac acgatgattc tgtggggtgc aaatcccccc ctttacttga 5820 gggaaatcaa gccc 5834 //