ID FJ969833; SV 1; circular; genomic DNA; STD; VRL; 2845 BP. XX AC FJ969833; XX DT 19-MAR-2010 (Rel. 104, Created) DT 25-JUN-2014 (Rel. 121, Last updated, Version 2) XX DE Sweet potato leaf curl virus isolate RS1-[BR:Tav1], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2845 RX DOI; 10.1016/j.virusres.2010.02.003. RX PUBMED; 20152869. RA Paprotka T., Boiteux L.S., Fonseca M.E., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT "Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm RT bank"; RL Virus Res. 149(2):224-233(2010). XX RN [2] RP 1-2845 RA Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT ; RL Submitted (22-APR-2009) to the INSDC. RL LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao RL Biologica, Brasilia, DF 70770-900, Brazil XX DR MD5; 0a1cd0ca670b0a3f9f86e42d7fe8e70b. XX FH Key Location/Qualifiers FH FT source 1..2845 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="RS1-[BR:Tav1]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:100755" FT gene 189..470 FT /gene="V2" FT CDS 189..470 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:D4HSB3" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:D4HSB3" FT /protein_id="ACY79458.1" FT /translation="MLSVKYLQSILKKYEPGTLGFELCSELIRIFRVRQYDRANSRFAE FT ISSIWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 295..1059 FT /gene="V1" FT CDS 295..1059 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:D4HSB4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:D4HSB4" FT /protein_id="ACY79459.1" FT /translation="MTGRIPVSRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRRRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCVKSMGIDGKVWMDDNVAKRDHTNIITYWLIRDRRPNKDPLNFGQIFTTYDNEPTTA FT KIRMDLRDRMQVLKKFSVTVSGGPYSHKEQALIRKFFKGLYNHVTYNHKEEAKYENQLE FT NALMLYSASSHASNPVYQTLRCRAYFYDSHNN" FT gene complement(1075..1509) FT /gene="Ren" FT CDS complement(1075..1509) FT /codon_start=1 FT /gene="Ren" FT /product="REn" FT /note="replication enhancer protein; C3" FT /db_xref="GOA:D4HSB5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D4HSB5" FT /protein_id="ACY79460.1" FT /translation="MDSRTGESLSRAQTMRALEFDTNPMSAGRTAPFYLRIMYVHESTQ FT GRTILKFQLRVNYRERRQLGFHKIFLQFRILTTRLTGAIHSWTGILERLKWHICNELAN FT LGFFSLVNLVFVIRYLPGVCSWIDEVDTVDCNDDVKLLLY" FT gene complement(1226..1672) FT /gene="Trap" FT CDS complement(1226..1672) FT /codon_start=1 FT /gene="Trap" FT /product="TrAP" FT /note="trans-activating protein; C2" FT /db_xref="GOA:D4HSB6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4HSB6" FT /protein_id="ACY79461.1" FT /translation="MSNPLSGYKRKCPIQEPLHAEAKKAKRKVPETRTRIVWKGCGCSA FT FITQTCKYQHGFTHRGITKSCSDYESTRIRHQPHVCGSDCTILPENNVCPREHTRENHP FT QIPAEGQLQGKEATGIPQDLPPVPDLDDPSNWCYSQLDWYFGTP" FT gene complement(1581..2675) FT /gene="Rep" FT CDS complement(1581..2675) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /note="replication-associated protein; C1" FT /db_xref="GOA:D4HSB7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4HSB7" FT /protein_id="ACY79462.1" FT /translation="MPRAGRFNIKAKNYFLTYPQCSLTKEEALEQLLNLNTPTNKKFIK FT ICRELHENGEPHLHVLLQFEGNYQCTNQRFSDLVSPSRSSHFHPNIQRAKSSSDVKSYV FT DKDGDTIEWGEFQVDGRSARGGQQTANDAAAEALNAGSKEAALQIIREKLPEKYLFQYH FT NLVSNLDRIFSPPPSVYSSPFSSSSFNAVPDIISDWAAENVMDSAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATTNAIFCDVQSPF FT WVQEEVSHSGATARRGEEGEEESS" FT gene complement(2261..2518) FT /gene="C4" FT CDS complement(2261..2518) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D4HSB8" FT /protein_id="ACY79463.1" FT /translation="MGNLISTCYCSSKGTTNARISDSPTLYPHQGRLTFTPTSRELNPA FT PMSSPTSIRTATQSNGVSSRSTADLLEEVSRLLTTQPQRR" XX SQ Sequence 2845 BP; 739 A; 603 C; 687 G; 816 T; 0 other; accggtgccc gccgcgccct tttaaagtgg accccactat gggaccacgc gtcttttccg 60 tactatcttt aatgatgaca ttgctttata aggaccaatc aggttgccgt gcttggcgcc 120 caagtatggc tgaattgtgg gaccctctgc agaacccact accagatact ttatacggtt 180 ttaggtgtat gctttccgta aaatacttgc agagtatttt gaagaaatac gagccaggaa 240 ccctagggtt cgagctctgt tcggagttaa tccgtatatt tagggtcagg cagtatgacc 300 gggcgaattc ccgtttcgcg gagatttcat ccatatgggg ggagaccggt aagacggagg 360 ctgaacttcg agacagctat cgtgccctac actgggaatg ctgtcccaat tgctgcccga 420 agctatgtcc cggtttcaag aggcgtccgg atgaagagaa ggaggggtga ccgcatcccg 480 aagggatgtg tgggtccctg taaggtccag gactatgagt tcaagatgga cgttccccac 540 acgggaacgt ttgtctgtgt ctcggatttt actaggggaa ctgggcttac ccatcgcctg 600 ggtaagcgtg tttgtgtgaa gtccatgggt atagatggta aggtctggat ggatgacaat 660 gtggccaaga gagatcacac caatatcatc acttactggc tgattcgtga cagaaggccc 720 aataaggatc cgctaaactt tggccagatc ttcacgacgt atgataatga gcccactact 780 gctaagatcc gaatggatct gagggataga atgcaggtct tgaagaagtt ttctgttaca 840 gtctcaggag gtccatacag tcacaaggag caggccttaa ttaggaagtt ttttaagggt 900 ttgtataatc atgttactta caatcacaag gaagaagcta agtacgagaa tcagttagaa 960 aatgctttga tgttgtatag tgctagcagt catgctagta atcctgtgta tcagaccctg 1020 cgttgcaggg cttatttcta tgattcgcac aataattaat aaaattatat tttattaata 1080 cagtaataac ttcacatcat cattacaatc tacagtatct acttcatcta tccaagaaca 1140 tactcctgga agatatctaa taacaaaaac taaattaact aaactaaaaa aacctaaatt 1200 tgctaattca ttacagatat gccatttaag gcgttccaaa ataccagtcc aactgtgaat 1260 agcaccagtt agacgggtcg tcaagatccg gaactggagg aagatcttgt ggaatcccag 1320 ttgcctcctt tccctgtagt tgaccctcag ctggaatttg aggatggttc tcccttgtgt 1380 gctctcgtgg acatacatta ttctcaggta gaatggtgca gtccgacccg cagacatggg 1440 gttggtgtcg aattctagtg ctctcatagt ctgagcacga cttagtgatt cccctgtgcg 1500 tgaatccatg ctggtacttg caggtctggg ttatgaaggc tgaacagccg cagcccttcc 1560 acactattct tgtccttgtt tcaggaactt tcctcttcgc cttcttcgcc tctgcgtgca 1620 gtggctcctg aatgggacac ttcctcttgt acccagaaag gggattggac atcgcagaat 1680 atagcgtttg ttgttgccca attcttgagt gctccttgtt ctggtttgtc caaccacagt 1740 ttaaatgagg agccctctcc tggattgcag aggaagatag tgggaattcc acctttaatt 1800 tgaactggct ttccgtattt acagtttgat tgccagtcct tctgggcccc catgaattct 1860 ttaaagtgct ttaggtattg ggggttgacg tcatcaatga cgttatacca agcactgttg 1920 ctgtacactt ttgggcttag atctaaatgc ccacacaaat aattgtgagg gcccaaagac 1980 ctggcccata ctgttttgcc tattctgctt gggccttcaa taacaatgga tatgggtcta 2040 tccggccgcg cagcggaatc cataacattt tcagcggccc agtcgctgat aatgtcagga 2100 acggcattga aagaagaaga agaaaaaggt gaagaatata cagaaggtgg aggagaaaaa 2160 atcctatcta aattactaac taaattatga tattgaaata aatatttttc agggagtttc 2220 tccctgatta tttgtaacgc agcttcttta gaacctgcgt ttagcgcctc tgcggctgcg 2280 tcgttagcag tctgctgacc tcctctagca gatctgccgt cgacctggaa ctcaccccat 2340 tcgattgtgt cgccgtcctt atcgacgtag gacttgacat cggagctgga tttagctctc 2400 tggatgttgg ggtgaaagtg agacgacctt gatggggata caaggtcgga gaatcgctga 2460 ttcgtgcatt ggtagttccc ttcgaactgc aatagcacgt ggagatgagg ttccccattt 2520 tcatgcagct ctctgcatat ttttatgaat tttttgttgg tgggggtgtt gagattaaga 2580 agctgctcga gagcttcttc tttggttaga gagcactggg gatatgtaag gaaatagttt 2640 ttggctttta tattaaaacg gcctgctcta ggcatggtga aaaaagcaaa tggtggaaca 2700 caaacttgct gaatgaatcg gtggaacggt ggacaattta tatgtgtcca ccaaatggca 2760 ttttggtaat ttagaagatc cttttagctt taattcaaat tccgacagct ctaggcccac 2820 aaaaggcggg caccgtatta atatt 2845 //