ID FJ969829; SV 1; circular; genomic DNA; STD; VRL; 2831 BP. XX AC FJ969829; XX DT 19-MAR-2010 (Rel. 104, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 3) XX DE Sweet potato leaf curl virus isolate PA [BR:Bel1], complete genome. XX KW . XX OS Sweet potato leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2831 RX DOI; 10.1016/j.virusres.2010.02.003. RX PUBMED; 20152869. RA Paprotka T., Boiteux L.S., Fonseca M.E., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT "Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm RT bank"; RL Virus Res. 149(2):224-233(2010). XX RN [2] RP 1-2831 RA Paprotka T., Boiteux L.S., Fonseca M.E.N., Resende R.O., Jeske H., RA Faria J.C., Ribeiro S.G.; RT ; RL Submitted (22-APR-2009) to the INSDC. RL LPP III, Embrapa Recursos Geneticos e Biotecnologia, Parque Estacao RL Biologica, Brasilia, DF 70770-900, Brazil XX DR MD5; 7e9601c2f7cfa2b5916cc1bbd0babdeb. DR EuropePMC; PMC3485178; 23082767. XX FH Key Location/Qualifiers FH FT source 1..2831 FT /organism="Sweet potato leaf curl virus" FT /host="Ipomoea batatas" FT /isolate="PA [BR:Bel1]" FT /mol_type="genomic DNA" FT /country="Brazil" FT /db_xref="taxon:100755" FT gene 188..469 FT /gene="V2" FT CDS 188..469 FT /codon_start=1 FT /gene="V2" FT /product="V2" FT /db_xref="GOA:D4HS89" FT /db_xref="InterPro:IPR002511" FT /db_xref="UniProtKB/TrEMBL:D4HS89" FT /protein_id="ACY79434.1" FT /translation="MLSVKYLQGILKKYEPGTLGFELCSELIRIFRVRQYDRANSRYAE FT ISSLWGETGKTEAELRDSYRALHWECCPNCCPKLCPGFKRRPDEEKEG" FT gene 294..1058 FT /gene="V1" FT CDS 294..1058 FT /codon_start=1 FT /gene="V1" FT /product="CP" FT /note="coat protein" FT /db_xref="GOA:D4HS90" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:D4HS90" FT /protein_id="ACY79435.1" FT /translation="MTGRIPVTRRFHPYGGRPVRRRLNFETAIVPYTGNAVPIAARSYV FT PVSRGVRMKRKRGDRIPKGCVGPCKVQDYEFKMDVPHTGTFVCVSDFTRGTGLTHRLGK FT RVCIKSMGIDGKVWMDDNVAKRDHTNIITYWLVRDRRPNKDPLTFVQAFAMCDNEPTTA FT KIRMDLRDRMQVLKKFSITVSGGPYNHKEQALVRKFFKGLYNHVTYNHKEEANYENHLE FT NALMLYSASSHASNPVYQTLRCRSYFYDSHNN" FT gene complement(1074..1508) FT /gene="Ren" FT CDS complement(1074..1508) FT /codon_start=1 FT /gene="Ren" FT /product="REn" FT /note="replication enhancer protein; C3" FT /db_xref="GOA:D4HS91" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:D4HS91" FT /protein_id="ACY79436.1" FT /translation="MDSRTGESLNHAQTTRALEFDTNSMSVGRTAPFHLRIMYVHESTQ FT GRTILKFQLMVNYRERRQLGYQQIFLQFRILTTRLTGAIHSWTGILERLKWRICNELAN FT IGFLSLVNLVFVIKYLPRVCSWIDEVDTVDCTDDVKVLLY" FT gene complement(1225..1671) FT /gene="Trap" FT CDS complement(1225..1671) FT /codon_start=1 FT /gene="Trap" FT /product="TrAP" FT /note="trans-activating protein; C2" FT /db_xref="GOA:D4HS92" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:D4HS92" FT /protein_id="ACY79437.1" FT /translation="MSNLPSGIKRKCPEQEPLHAAAKKAKRKVPEQRTRIVWKGCGCSA FT FITTTCKYQHGFTHRGITKSCSDYESTRIRHQLHVCGSDCTVPSQNNVCPREHTGENHP FT QIPADGQLQGKEATGIPTDLPPIPDLDDPSNWCYSQLDWYFGTP" FT gene complement(1580..2674) FT /gene="Rep" FT CDS complement(1580..2674) FT /codon_start=1 FT /gene="Rep" FT /product="Rep" FT /note="replication-associated protein; C1" FT /db_xref="GOA:D4HS93" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D4HS93" FT /protein_id="ACY79438.1" FT /translation="MPRQPGFRVSAKNIFLTYPKCSLSKETALELLKAVNCPSDKLFIR FT VSQEKHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPNSSTQFHPNFQGAKSSSDVNSYI FT QKDGDYIDWGTFQVDGRSARGGQQTANDAAAEALNAGSAEAALQIIREKLPRDFIFQFH FT NLRSNLDRIFSPPPSVYSSPFSISSFNNVPDIISDWAAENVMDAAARPDRPISIVIEGP FT SRIGKTVWARSLGPHNYLCGHLDLSPKVYSNSAWYNVIDDVNPQYLKHFKEFMGAQKDW FT QSNCKYGKPVQIKGGIPTIFLCNPGEGSSFKLWLDKPEQGALKNWATANAIFCDVQSPF FT WNQEEVSGAGAITRSSEEGQEESS" FT gene complement(2260..2517) FT /gene="C4" FT CDS complement(2260..2517) FT /codon_start=1 FT /gene="C4" FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:D4HS94" FT /protein_id="ACY79439.1" FT /translation="MGLCTSMLSSSSRVKPNLKIPDISTCNTPTAPPNSIQISKELNHH FT QMSIPTSRRTVITSTGVLFKSTEDLLEEVSRQLMMQQQRP" XX SQ Sequence 2831 BP; 735 A; 592 C; 664 G; 840 T; 0 other; accggtgccc gccgcgccct ttaatagtgg gccccaccaa ttgacaacgc gtcttttccg 60 tactatcttt aatgatgaca ttgctttata aggaccaatg ctgttacagt cttggtcgcc 120 aagtatggct gacttgtggg accctttgca gaacccacta ccagatactt tatacggttt 180 ccgttgtatg ctttctgtaa aatacctgca aggtattttg aagaaatacg agccaggaac 240 cctagggttc gagctctgtt cggagttaat ccgtatattc agggtcaggc agtatgacag 300 ggcgaattcc cgttacgcgg agatttcatc cctatggggg gagaccggta agacggaggc 360 tgaacttcga gacagctatc gtgccctaca ctgggaatgc tgtcccaatt gctgcccgaa 420 gctatgtccc ggtttcaaga ggcgtccgga tgaagagaaa gaggggtgac cgcatcccga 480 agggatgtgt tggtccctgt aaggtccagg actatgagtt caagatggac gttccccaca 540 cgggaacttt tgtctgtgtc tcggatttta caagggggac tgggcttacc catcgtttgg 600 gtaagagggt gtgtattaaa tccatgggta ttgatggtaa ggtttggatg gatgacaacg 660 tcgccaagag ggaccacacg aacatcatta cttactggtt ggtccgagat aggaggccca 720 ataaggatcc attgacgttt gtccaggcgt ttgcaatgtg tgataacgag ccaactactg 780 cgaagatcag aatggatctg agagatagaa tgcaggttct gaagaagttt tctattactg 840 tatctggtgg cccttataac cacaaggagc aggctttagt taggaagttt tttaagggat 900 tgtataatca tgttacttat aatcataagg aggaggccaa ttatgagaat catttagaga 960 atgcgttaat gttgtattct gctagcagtc atgctagtaa tcctgtgtat cagaccctgc 1020 gttgcaggtc ttatttctat gattcacaca acaattaata aaattttatt ttattaatac 1080 agtaatacct ttacatcatc agtacaatct accgtatcta cttcatctat ccaagaacat 1140 actcttggaa gatatttaat aacaaaaact aaattaacta gactaagaaa tcctatattt 1200 gctaattcat tacatatgcg ccatttaagg cgttccaaaa taccagtcca actgtgaata 1260 gcaccagtta gacgggtcgt caagatccgg aattggagga agatctgttg gtatcccagt 1320 tgcctccttt ccctgtagtt gaccatcagc tggaatttga ggatggttct cccctgtgtg 1380 ctctcgtgga catacattat tctgagatgg aacggtgcag tccgacccac agacatggag 1440 ttggtgtcga attcgagtgc tctcgtagtc tgagcatgat ttagtgattc ccctgtgcgt 1500 gaatccatgc tggtacttgc aggttgtggt tatgaaggct gaacagccgc aacccttcca 1560 cactatcctc gtcctctgtt caggaacttt cctcttggcc ttcttcgctg ctgcgtgtaa 1620 tggctcctgc tccggacact tcctcttgat tccagaaggg agattggaca tcgcagaata 1680 tagcgtttgc tgttgcccaa ttcttgagtg ctccttgctc tggtttgtct agccagagtt 1740 taaatgagga accctctcct ggattgcaga ggaagatagt gggaattccg cctttaattt 1800 gaactggctt tccgtattta cagtttgatt gccagtcctt ctgggccccc atgaactctt 1860 taaagtgctt taggtattgg gggttgacgt catcaatgac gttataccaa gcactgttgc 1920 tgtacacctt tggactcagg tccaaatgcc cacacagata attatgtggg cctaatgatc 1980 tagcccaaac tgttttacct attctacttg ggccttctat aacaatactt atgggcctat 2040 ctggccgcgc agcggcatcc atgacattct cagcagccca atcgctgata atgtcaggaa 2100 cattattgaa agaagaaatg gaaaaaggtg aagaatatac agatggtgga ggagaaaaaa 2160 tcctatctaa attactacgt aaattatgaa attgaaaaat aaaatctcta gggagtttct 2220 ccctaattat ttgtaatgct gcttcagcag agcctgcgtt taaggcctct gctgctgcat 2280 cattagctgt ctgctgacct cctctagcag atcttccgtc gacttgaaaa gtaccccagt 2340 cgatgtaatc accgtccttc tggatgtagg aattgacatc tgatgatgat ttagctcctt 2400 ggaaatttgg atggaattgg gtggagctgt tggggtgttg caggtcgaaa tgtctgggat 2460 ttttaaattg ggctttaccc ttgaactgga tgagagcatg gaggtgcaaa gacccatctt 2520 gatgtttttc ctggctaact ctgataaaca atttatcaga tgggcagttt actgccttta 2580 atagctcaag agctgtttct tttgagagag aacatttggg ataagttaga aagatatttt 2640 tggctgagac tctaaaacct ggttgacgag gcatattggt gtccctctaa actctacgga 2700 attggtgtct ttggtgtccc atttatacct gagacaccaa tggcattttg ggaatttaaa 2760 agatcctttt agctttaatt caaattccga caactctggg tccaccaaaa ggcgggcacc 2820 gtattaatat t 2831 //