ID FJ956706; SV 1; circular; genomic DNA; STD; VRL; 2770 BP. XX AC FJ956706; XX DT 01-MAY-2011 (Rel. 108, Created) DT 01-MAY-2011 (Rel. 108, Last updated, Version 1) XX DE Tomato yellow leaf curl virus isolate Alb76, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2770 RA Idris A.M., Brown J.K.; RT "A novel recombinant species of begomovirus is associated with tomato leaf RT curl disease in Oman: molecular characterization and infectivity analysis"; RL Unpublished. XX RN [2] RP 1-2770 RA Idris A.M., Brown J.K.; RT ; RL Submitted (22-APR-2009) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; 83d357aa0b7bbe9361fddb598705e228. XX FH Key Location/Qualifiers FH FT source 1..2770 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum L. (tomato)" FT /isolate="Alb76" FT /mol_type="genomic DNA" FT /country="Oman" FT /collection_date="2005" FT /db_xref="taxon:10832" FT CDS 129..479 FT /codon_start=1 FT /product="V2" FT /note="precoat" FT /db_xref="GOA:B4YPN3" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:B4YPN3" FT /protein_id="ADC79185.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARFEGSPKAELRQPLQQPCCCPHCPRHKQATVMDVQAHV FT PKAQNIQNVSKP" FT CDS 289..1065 FT /codon_start=1 FT /product="V1" FT /note="Coat protein" FT /db_xref="GOA:B4YPN4" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:B4YPN4" FT /protein_id="ADC79186.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGINKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPMDFGQVFNMFDN FT EPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1062..1466) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:B4YPN5" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:B4YPN5" FT /protein_id="ADC79190.1" FT /translation="MDSRTGELITAPQAENGVFIWEIYNPLYFKITEHSQRPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLQPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTESHDIKYKFY" FT CDS complement(1207..1614) FT /codon_start=1 FT /product="C2" FT /note="TrAP" FT /db_xref="GOA:B4YPN6" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:B4YPN6" FT /protein_id="ADC79189.1" FT /translation="MQPSSPSTSHCSQVPIKVQHKISKKRPIRRKRVDLDCGCSYYLHL FT NCNNHGFTHRGTHHCSSSREWRFYLGDIQSPLFQDNRTQPEAISNEPRHHFHSDKIQPQ FT HKEGTGDSQMFSQLPNLDDITASDWSFLKSI" FT CDS complement(1523..2602) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:B4YPN7" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:B4YPN7" FT /protein_id="ADC79187.1" FT /translation="MAPPKRFQINCKNYFLTYPQCSLTKEEALSQLQNLETPTNKKYIK FT VCRELHENGEPHLHVLIQFEGKFKCQNQRFFDLVSPSRAAHFHPNIQGAKSSSDVKSYI FT DKEGDTLDWGEFQIDGRSARGGQQSANDAYAAAINSGSKAEALRVLRELAPRDYILQFH FT NLNSNLDRIFQEPPAPYISPFLSSSFNQVPEELEVWVSENVMSSAARPWRPNSIVIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNISLKNWALKNATFVTLHEPL FT FSSTNQGPTQDIQEETNKA" FT CDS complement(2143..2427) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:F4MJ97" FT /protein_id="ADC79188.1" FT /translation="MCLSNSRGNSSAKISDSSTWYPQAGQHISIQTFRELNPVPTSSLT FT STRRETPSTGESFRSMEGLQEGDNNLQTTLTPQQLTLEVRQRLLEFLGN" XX SQ Sequence 2770 BP; 750 A; 546 C; 618 G; 856 T; 0 other; accggatggc cgcgccccgc gtgggtccca cacacgtcgt tatcatccaa tcaaattgat 60 gactgaaacg ttagataatt ggttatttgt ccttataaac ttagtcccca agtttgctgt 120 cttgcaatat gtgggatcca cttcttaatg aatttcctga atccgttcac ggatttcgtt 180 gtatgttagc tattaaatat ttgcaggccg ttgaggaaac gtatgagccc aacactttgg 240 gccacgattt aattagggat cttatatctg ttgtaagggc tcgtgactat gtcgaagcga 300 cccggcgata taatcatttc cacgcccgtt tcgaaggttc gccgaaggct gaacttcgac 360 agcccctaca gcagccgtgc tgctgccccc attgtccaag gcataaacaa gcgacggtca 420 tggacgtaca ggcccatgta ccgaaagccc agaatataca gaatgtatcg aagccctgat 480 gttccccgtg gatgtgaagg gccatgcaaa gtccagtctt atgagcaacg tgatgatatt 540 aagcatactg gtattgttcg ttgtgttagt gatgttactc gtggatctgg aattactcac 600 agagtgggta agaggttctg tgttaaatcg atatattttt taggtaaagt ctggatggat 660 gaaaatatca agaagcagaa tcatactaat caggtcatgt tcttcttggt ccgtgataga 720 aggccttatg gaagcagccc aatggatttt ggacaggttt ttaatatgtt cgataatgag 780 cccagtaccg caaccgtgaa gaatgatttg cgggataggt ttcaagtgat gaggaaattt 840 catgctacag ttattggtgg gccctctgga atgaaggaac aggcattagt taagagattt 900 tttagaatta acagtcatgt aacttataat catcaggagg cagccaagta tgagaaccat 960 actgagaacg ccttgttatt gtatatggca tgtacacatg cctctaatcc agtgtatgca 1020 actatgaaaa tacgcatcta tttctatgat tcaatatcaa attaataaaa tttatatttt 1080 atatcatgac tttctgttac atttattgtg ttttcaagta catcatacaa tacatgatca 1140 actgctctga ttacattgtt tatggaaatt acaccaagac tatctaaata cttaagaact 1200 tgatatctaa atactcttaa gaaacgacca gtctgaggct gtaatgtcgt ccagattcgg 1260 aagttgagaa aacatttgtg aatccccagt accttcctta tgttgtggtt gaatcttatc 1320 tgaatggaaa tgatgtcgtg gctcattaga aatggcctct ggctgtgttc tgttatcttg 1380 aaatagaggg gattgtatat ctcccagata aaaacgccat tctctgcttg aggagcagtg 1440 atgagttccc ctgtgcgtga atccatgatt attgcagttg aggtggaggt agtatgagca 1500 accgcagtct aggtctacac gcttacgcct tattggtctc ttcttggata tcttgtgttg 1560 gaccttgatt ggtacttgag aacagtggct cgtggagggt gacgaaggtt gcattcttga 1620 gagcccaatt tttcaaggat atgttttttt cttcgtctag atattcctta tatgaggatg 1680 taggtcctgg attgcagagg aagatagtgg gaattccccc tttaatttga atgggcttcc 1740 cgtactttgt gttgctttgc cagtccctct gggcccccat gaattccttg aagtgcttta 1800 aataatgcgg gtctacgtca tcaatgacgt tataccacgc atcattactg tacacctttg 1860 ggcttaggtc tagatgtcca cataaataat tatgtgggcc tagagacctg gcccacattg 1920 ttttgccggt tctgctatca ccctcgatga caatactgtt aggtctccac ggccgcgcag 1980 cggaagacat gacgttctcc gacacccata cttcaagttc ctctggaact tgattaaaag 2040 aagaagacaa aaagggagaa atataaggag ccggaggctc ctgaaaaatc ctatctaaat 2100 tactatttaa attatgaaat tgcaaaatat aatctctggg ggctaattcc ctaagaactc 2160 taagagcctc tgccttactt ccagagttaa ttgctgcggc gtaagcgtcg tttgcagatt 2220 gttgtccccc tcttgcagac cttccatcga tctgaaactc tccccagtcg agggtgtctc 2280 cctccttgtc gatgtaagac ttgacgtcgg aactggattt agctccctga atgtttggat 2340 ggaaatgtgc tgccctgctt ggggatacca agtcgaagaa tcgctgattt tggcacttga 2400 atttcccctc gaattggata agcacatgga gatgtggctc cccattctcg tgaagttccc 2460 tgcaaacttt gatgtatttt ttatttgttg gggtttctag gttttgtaat tgggaaagtg 2520 cctcttcttt tgttaatgag cactgaggat atgtgaggaa ataatttttg caatttattt 2580 ggaaacgctt agggggagcc atatggtcaa tgagtaccga ttgaccaaga tttacactta 2640 tccctggtat atcggtactc aatatatagt gagtaccaaa tggcattttg gtaatttggt 2700 aaaagtacaa tgcaatttaa aattcaaaat tcaaaaatca aatcagtaaa gcggccatcc 2760 gtataatatt 2770 //