ID FJ956704; SV 1; circular; genomic DNA; STD; VRL; 2755 BP. XX AC FJ956704; XX DT 27-SEP-2010 (Rel. 106, Created) DT 09-MAR-2011 (Rel. 108, Last updated, Version 2) XX DE Tomato yellow leaf curl virus isolate Alb26, complete genome. XX KW . XX OS Tomato yellow leaf curl virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2755 RA Idris A.M., Brown J.K.; RT "A novel recombinant species of begomovirus is associated with tomato leaf RT curl disease in Oman: molecular characterization and infectivity analysis"; RL J. Gen. Virol. 0:0(2010). XX RN [2] RP 1-2755 RX DOI; 10.1099/vir.0.025288-0. RX PUBMED; 21084498. RA Idris A.M., Shahid M.S., Briddon R.W., Khan A.J., Zhu J.K., Brown J.K.; RT "An unusual alphasatellite associated with monopartite begomoviruses RT attenuates symptoms and reduces betasatellite accumulation"; RL J. Gen. Virol. 92(Pt 3):706-717(2011). XX RN [3] RP 1-2755 RA Idris A.M., Brown J.K.; RT ; RL Submitted (22-APR-2009) to the INSDC. RL Plant Sciences, University of Arizona, Tucson, AZ 85721, USA XX DR MD5; 25729cf73a26fa7388af9a9bd9af4587. XX FH Key Location/Qualifiers FH FT source 1..2755 FT /organism="Tomato yellow leaf curl virus" FT /host="Solanum lycopersicum L. (tomato)" FT /isolate="Alb26" FT /mol_type="genomic DNA" FT /country="Oman" FT /collection_date="2005" FT /db_xref="taxon:10832" FT CDS 132..482 FT /codon_start=1 FT /product="V2" FT /note="precoat" FT /db_xref="GOA:E1U844" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:E1U844" FT /protein_id="ADC79173.1" FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL FT ISVVRARDYVEATRRYNHFHARLEGSPKAELRQPLQQPCCCPHCPRHKQATVMDVQAHV FT PKAQNIQNVSKP" FT CDS 292..1068 FT /codon_start=1 FT /product="V1" FT /note="Coat protein" FT /db_xref="GOA:E1U845" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:E1U845" FT /protein_id="ADC79174.1" FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGTNKRRSW FT TYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDFKHTGIVRCVSDVTRGSGITH FT RVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGSSPVDFGQVFNMFDN FT EPSTATVKNDLRDRFQVIRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE FT NHTENALLLYMACTHASNPVYATMKIRIYFYDSISN" FT CDS complement(1065..1469) FT /codon_start=1 FT /product="C3" FT /note="REn" FT /db_xref="GOA:E1U846" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:E1U846" FT /protein_id="ADC79178.1" FT /translation="MDSRTGELITAHQAQNGVFIWEIENPLYFKITNHDERPFLMSHDI FT ISIQIRFNHNIRKVLGIHKCFLNFRIWTTLRPQTGRFLRVFRYQVLKYLDSLGVISINN FT VIRAVDHVLYDVLENTINVTESHDIKYKFY" FT CDS complement(1210..1617) FT /codon_start=1 FT /product="C2" FT /note="TrAP" FT /db_xref="GOA:E1U847" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:E1U847" FT /protein_id="ADC79177.1" FT /translation="MQPSSPSTSHCSQVPIKIQHRIAKTKPVRRKRIDLDCGCSYYLHI FT NCINHGFTHRGTHHCSSSPEWRFYMGDRKSPVFQDHQPRREAISNEPRHHFHSDKIQSQ FT YQEGTGDSQMFSQLPNLDDLTASDWSFLKSI" FT CDS complement(1541..2605) FT /codon_start=1 FT /product="C1" FT /note="Rep" FT /db_xref="GOA:E1U848" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:E1U848" FT /protein_id="ADC79175.1" FT /translation="MAAPNRFKINAKNYFLTYPKCSLTKEEALSQLLNLQTPTSKKFIR FT ICRELHEDGTPHLHVLIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSSDVKTYM FT EKDGDVIDHGVFRVDGRSARGGCQSANDAYAEAINSGSKAQALNILKEKAPRDFVLQFH FT NLNSNLDRFFQEPPAPYISPFLSSSFNQVPEELEEWAAENVMSSAARPWRPNSIIIEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNISLKNWALKNATFVTLYEPL FT FSSANQNPTPHSED" FT CDS complement(2155..2430) FT /codon_start=1 FT /product="C4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:E1U849" FT /protein_id="ADC79176.1" FT /translation="MFSSNSKESSNARTIDSSTSPPQPGQHISIRTFRELKAQAMSKPT FT WRKTETSLIMEFSESMDDQLEEVANLPTTHMPRQSIQGPKLRPSIY" XX SQ Sequence 2755 BP; 735 A; 539 C; 628 G; 853 T; 0 other; accggatggc cgcgcgcccc acgtgggtcc cacacacgtc gctatcatcc aatcaaattg 60 atgactgaaa cgttagataa ttgtttattt gtctttataa acttagtccc ccaagtttgt 120 tgtcttgcaa tatgtgggat ccacttctta atgaatttcc tgaatccgtt cacggatttc 180 gttgtatgtt agctattaaa tatttgcagg ccgttgagga aacgtatgag cccaacactt 240 tgggccacga tttaattagg gatcttatat ctgttgtaag ggctcgtgac tatgtcgaag 300 cgacccggcg atataatcat ttccacgccc gtctcgaagg ttcgccgaag gctgaacttc 360 gacagcccct acagcagccg tgctgctgcc cccattgtcc aaggcacaaa caagcgacgg 420 tcatggacgt acaggcccat gtaccgaaag cccagaatat acagaatgta tcgaagccct 480 gatgttcccc gtggatgtga aggcccatgt aaagtccagt cttatgagca acgggatgat 540 tttaagcata ctggtattgt tcgttgtgtt agtgatgtta ctcgtggatc tggaattact 600 cacagagtgg gtaagaggtt ctgtgttaaa tcgatatatt ttttaggtaa agtctggatg 660 gatgaaaata tcaagaagca gaatcacact aatcaggtca tgttcttctt ggtccgtgat 720 agaaggccct atggaagcag cccagtggat tttggacagg tttttaatat gttcgataat 780 gagcccagta ccgcaaccgt gaagaatgat ttgcgggata ggtttcaagt gataaggaaa 840 tttcatgcta cagttattgg tgggccctct ggaatgaagg aacaggcatt agttaagaga 900 ttttttagaa ttaacagtca tgtaacttat aatcatcagg aggcagccaa gtacgagaac 960 catactgaaa acgccttgtt attgtatatg gcatgtactc atgcctctaa tccagtgtat 1020 gcaactatga aaatacgcat ctatttctat gattcaatat caaattaata aaatttatat 1080 ttgatatcat gactttctgt tacatttatt gtgttttcaa gtacatcata caatacatga 1140 tcaactgctc tgattacatt gttaatggaa attactccaa gactatctaa atacttaaga 1200 acttgatatc taaatactct taagaaacga ccagtctgag gccgtaaggt cgtccagatt 1260 cggaagttga gaaaacattt gtgaatcccc agtaccttcc tgatattgtg attgaatctt 1320 atctgaatgg aaatgatgtc gtggctcatt agaaatggcc tctcgtcgtg gttggtgatc 1380 ttgaaataca ggggattttc tatctcccat ataaaaacgc cattctgggc ttgatgagca 1440 gtgatgagtt ccccggtgcg tgaatccatg attgatgcag ttgatgtgga ggtaatatga 1500 gcatccgcag tcgaggtcta tgcgcttacg tctgactggc ttagtcttcg ctatgcggtg 1560 ttggattttg attggcactt gagaacagtg gctcgtagag ggtgacgaag gttgcattct 1620 tgagagccca attttttaat gatatgtttt tttcttcgtc tagatattcc ttatatgatg 1680 aggtaggtcc tggattgcag aggaagatag ttggaatacc ccctttaatt tgaatgggct 1740 tcccgtactt tgtgttgctt tgccagtccc tctgggcccc catgaattcc ttgaagtgct 1800 ttaaataatg cgggtctacg tcatcaatga cgttgtacca cgcatcatta ctgtacacct 1860 ttggacttag gtctaaatgg ccacacaaat aattgtgtgg gcctagagac ctggcccaca 1920 ttgttttgcc ggtcctgcta tcaccctcga tgataatact attaggcctc catggccgcg 1980 cagcggaaga catgacgttc tcggccgccc actcttcaag ttcttctgga acttgattaa 2040 aagatgaaga taaaaaggga gaaatataag gagccggagg ctcctgaaaa aacctatcta 2100 aatttgaatt taaattgtga aattgaagta caaagtctct aggagctttc tcctttagta 2160 tattgagggc ctgagctttg gaccctgaat tgattgcctc ggcatatgcg tcgttggcag 2220 attggcaacc tcctctagct gatcgtccat cgactcggaa aactccatga tcaatgacgt 2280 ctccgtcttt ctccatgtag gttttgacat cgcttgagct tttagctccc tgaatgttcg 2340 gatggaaatg tgctgacctg gttggggagg tgaggtcgaa gaatctattg ttcttgcatt 2400 ggaactttcc ttcgaattgg atgagaacat gcaagtgagg agtcccatct tcgtgaagct 2460 ctctgcagat tctaatgaat tttttggaag tgggtgtttg gagatttaat aattgggaaa 2520 gtgcttcctc tttagttaga gagcatttgg gataagtgag aaaataattt ttggcattta 2580 ttttaaaccg attgggggct gccatattga cttggtcaat cggagtctct caactctttc 2640 tatgtattgg tgtattggag tcctatatat atggagactc caatggcata tatgtaaata 2700 ttgtacttta attcaaaatt ctcacgctcc aaaaagcggc catccgtata atatt 2755 //