ID FJ947157; SV 1; linear; genomic RNA; STD; VRL; 3613 BP. XX AC FJ947157; XX DT 03-JUN-2009 (Rel. 101, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Capsicum chlorosis virus isolate KK segment S, complete sequence. XX KW . XX OS Capsicum chlorosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Capsicum chlorosis orthotospovirus. XX RN [1] RP 1-3613 RA Seepiban C., Gajanandana O., Chiemsombat P., Attathom T., Attathom S.; RT "Sequence analysis of S and M RNA segments of Capsicum chlorosis virus RT isolated from peanut in Thailand"; RL Unpublished. XX RN [2] RP 1-3613 RA Seepiban C., Gajanandana O., Chiemsombat P., Attathom T., Attathom S.; RT ; RL Submitted (21-APR-2009) to the INSDC. RL Department of Plant Pathology, Faculty of Agriculture, Kasetsart RL University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand XX DR MD5; 28916a52a98af53a5821e1fae6ec2707. XX FH Key Location/Qualifiers FH FT source 1..3613 FT /organism="Capsicum chlorosis virus" FT /segment="S" FT /host="Arachis hypogaea" FT /isolate="KK" FT /mol_type="genomic RNA" FT /country="Thailand" FT /collection_date="28-Apr-2006" FT /note="serogroup: IV" FT /db_xref="taxon:163325" FT gene 67..1386 FT /gene="NSs" FT CDS 67..1386 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:C5IJK4" FT /protein_id="ACR45980.1" FT /translation="MSTVKSAASEFVKSYGTRDNRAINDCYSVFNGEGVNFLNLFMHNN FT AGIKSAFSINDLGRNEDIKIHEAEVVDTCHDYNYFEKFGLDITFCEHVMSLVVRKPGIK FT NTGCKFSMHNQIFNPNANTLSIAPGTTLEEGFYEKSKIKPIELLPSDWCLDECWKNNFY FT IATNGDFALDYGFSVMGKTTSYWRENISREKILSFKHKSLPDNTVPTNRLLSTSTVKGI FT QLGSELAPETTIILSCKQNLSIDLKSQYRISFHGIQEEGAFARTFCIPFENKSRMICFY FT AKTVADNSNERTTLIIKIVTKTVDSHSMRPNRNHINCNKLLGARIGLVDFCDSDPNYNQ FT MIVKELLSVHTQFALNLSGALKKPIIVFKMYDKELINGHVEVSGRILNYQVDADGNVYF FT LSKTLEVLPRSLSTLSYLNSVAPTLWKESLEHQHFTVELQ" FT gene complement(2719..3546) FT /gene="N" FT CDS complement(2719..3546) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:Q4U0E7" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:Q4U0E7" FT /protein_id="ACR45981.1" FT /translation="MSNVRQLTEKKIRELLAGGTADVEIETEDSTPGFSFKTFYDNNKS FT VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM FT INMVEKSKNESAKQEMYAKVMELPLVAAYGLNIPALFDSCALRMMLCIGGPLPLLSSIK FT GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL FT LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGVHSKKSSKPSTSIEV" XX SQ Sequence 3613 BP; 1248 A; 576 C; 560 G; 1229 T; 0 other; agagcaatcg aggcatctaa taattcaaga aaaacaacga taagatcaag aaatactact 60 tcaggcatgt ctactgtgaa gagtgctgct tcagaatttg tgaagagcta tggaacaagg 120 gataatagag ctatcaatga ttgctattct gtattcaatg gagaaggtgt caatttcctc 180 aatctgttca tgcataacaa tgcaggtatt aaatctgcat tcagcatcaa tgatttggga 240 aggaatgaag atatcaaaat ccatgaagct gaggttgttg atacatgcca tgattataat 300 tactttgaga aatttggttt agacataaca ttctgtgaac atgtgatgag tttggtcgta 360 aggaaacctg gcataaaaaa cacaggctgc aagttctcaa tgcataatca gatcttcaat 420 ccaaatgcca ataccttgtc tattgctccg ggaacgaccc tagaggaagg tttctatgaa 480 aaaagtaaga taaaacccat cgagctcctt ccctcagact ggtgcttgga tgaatgctgg 540 aagaacaatt tttacatagc tactaatgga gactttgctt tggattatgg attctctgta 600 atgggtaaaa caacttctta ctggagagag aacatctcta gggaaaagat cttatctttc 660 aaacataaaa gtctccctga taatactgtt ccaaccaata ggttgttatc cacatctact 720 gttaaaggca ttcagttggg ttctgagcta gctcctgaaa ctacaattat tttgtcatgc 780 aaacaaaatc ttagtattga tctaaaatct cagtatcgca tttcatttca tggtattcaa 840 gaggaaggtg cttttgctag aactttctgc attccctttg aaaacaaatc tagaatgatt 900 tgcttttatg caaagacagt tgctgacaat agcaatgaaa gaacaacttt aattataaaa 960 atagtcacaa agactgttga ctctcattca atgagaccta acagaaatca tatcaactgc 1020 aataaactgt tgggagcaag aattggttta gttgattttt gtgattctga tccaaattat 1080 aatcagatga ttgtaaagga gctgttaagt gttcataccc aatttgcact caacctatct 1140 ggagcattga aaaaaccaat cattgtattc aagatgtatg ataaggaatt gataaatggg 1200 catgtagaag tttcaggaag gattctgaat taccaggtag atgctgacgg aaatgtttat 1260 tttctctcaa aaaccctgga ggtcctccca agatccctat caaccttaag ttacttaaat 1320 agtgttgcac caacactatg gaaagaatcc ttagagcatc aacatttcac tgtggagctc 1380 caataaactt tatgagtgtt aactttattt aatattatat aatctgcatt attcaagtta 1440 atgtaattat aatgtaagca ctataaacaa gaataaacat agttaatata aataaataag 1500 cataatataa atagatataa atagataaat aagtttatgt ttaaatttaa gttattcata 1560 agttagttaa ttatgttatc atatatttaa attattgaaa tgttgtctta atataagtaa 1620 gtttaagttg tataatcaaa acaaaaaata acaagcaaaa acccataaaa aactaaaaaa 1680 cagaaaatcc aaaaagacct cgaaagaggc aaatttggct taagtatttt gaatgattta 1740 atttattatg gcatttttgg atctataaat ttagataata cttgaatttt attagtttaa 1800 acacttattg tttgcatgct gaagatataa atgaagttaa gctcttagct aagtacttga 1860 ctcatgaagt tttgatgacc ataacaactt tctgattatt aaattcaatt caagcaaagc 1920 tatgcctatt ctagtaagat tgttcattac taacaatact caaatttagt ttgtctagag 1980 tatttctatt tgcatttttg gaatataagg aaattatata tcattaaaag catttaaatt 2040 ccttagcttg tacatttggt ttattggggt tagctaacaa tgatgacatc taatctgttt 2100 agtttgatct actcaaagtt ttacttccag ttaaactaaa tagagccgtg gtctacttgc 2160 ttagaatagc taattccaaa gttagttcat tcaacaaatc tgtctattta aaactatcta 2220 tgtaaatcta tttagatcag agtatctaac ttctccaaaa ctctagtgta ataacttcat 2280 ttgatcagtt acttgaaaaa tctaatcaaa ttacctatga gagaataaac taatttatag 2340 agctcaatat gatatttaaa tttaggatta gataaaccaa tagtttgcct ccgaagaggt 2400 cttttttggt ttttctattt tttgattttt ttggattttt taagtttttt gaatctaagc 2460 tgtctataga tacatggata tatatatctt aattataata tatatctata gttgtaaaca 2520 cacttatact tacttgagta attatatata tttatgctta tgtgtatata actaataaac 2580 acaaacaata aaaattttat atatttagtt tataacatga caatagatta atatgaattg 2640 acttataatt gaatataaca tacatttata tatatataaa aacatatatt ctaatataag 2700 tagttataac tatttaaatt acacctctat agaagtacta ggctttgagc tcttctttga 2760 atgaacacca taatcatcca cagacaaatt ggcactaaat gctttgtcca tatacttgac 2820 ttgctcatca tacttcttaa gtgagataga actagcagta ccagggttgc tttcactaag 2880 caacttgaca gcctgtttga acaatgtgtt cagatcttcc ttaaattcta tttgagaagc 2940 agaaagaact ttagccactt tgcaaacctg ttcataggta gagaagtttt tgatgcccaa 3000 tttctctttt ttaacatttt ggtaataagc taatgggaaa ataattggtg caaggccttt 3060 aatgctggat aatagtggta gaggaccacc aatacataac atcatcctga gagcacatga 3120 atcaaacaaa gcaggtatgt tcaatccata tgctgccact aaaggtaatt ccatcacctt 3180 tgcatacatc tcttgcttag cactttcatt cttactcttt tctaccatgt tgatcatctt 3240 aactcttatt aaagcttctg ttctcttaaa agtccaatcc tccggaccaa cattagcgtc 3300 tgtagaaaca attgtttttt cacagaactt atactttcca cttttgcaag cagcaaaaat 3360 ctgctttcta cacttcaaaa tattaagaca gtttgtgaaa gtcatttcaa cgctcttgtt 3420 attatcatag aatgtcttga aactgaatcc aggagttgaa tcctcagtct caatttcaac 3480 atctgcagtt ccaccagcca agagttctct aattttcttc tcggtaagtt gcctgacgtt 3540 agacatggtg tttactatgg aaacgtctga tatgatgact ttaaacggat tttattagtg 3600 cctcgattgc tct 3613 //