ID FJ947156; SV 1; linear; genomic RNA; STD; VRL; 3612 BP. XX AC FJ947156; XX DT 03-JUN-2009 (Rel. 101, Created) DT 03-JUN-2009 (Rel. 101, Last updated, Version 1) XX DE Capsicum chlorosis virus isolate NRA segment S, complete sequence. XX KW . XX OS Capsicum chlorosis virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Capsicum chlorosis orthotospovirus. XX RN [1] RP 1-3612 RA Seepiban C., Gajanandana O., Chiemsombat P., Attathom T., Attathom S.; RT "Sequence analysis of S and M RNA segments of Capsicum chlorosis virus RT isolated from peanut in Thailand"; RL Unpublished. XX RN [2] RP 1-3612 RA Seepiban C., Gajanandana O., Chiemsombat P., Attathom T., Attathom S.; RT ; RL Submitted (21-APR-2009) to the INSDC. RL Department of Plant Pathology, Faculty of Agriculture, Kasetsart RL University, Kamphaeng Saen Campus, Nakhon Pathom 73140, Thailand XX DR MD5; 9258b90427bb921233acb1aebcee2376. XX FH Key Location/Qualifiers FH FT source 1..3612 FT /organism="Capsicum chlorosis virus" FT /segment="S" FT /host="Arachis hypogaea" FT /isolate="NRA" FT /mol_type="genomic RNA" FT /country="Thailand" FT /collection_date="20-Jan-2008" FT /note="serogroup: IV" FT /db_xref="taxon:163325" FT gene 67..1386 FT /gene="NSs" FT CDS 67..1386 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:C5IJK2" FT /protein_id="ACR45978.1" FT /translation="MSTVKSAASEFVKSYGTRDNRAVNDCYSVFNGEGVNFLNLFMHNN FT AGIKSAFSINDLGRNEDIKIHEAEVVDTCHDYNYFEKFGLDITFCEHVMSLVVRKPGIK FT NTGCKFSMHNQIFNPNANTLSIAPGTTLEEGFYEKSKIKPIELLPSDWCLDECWKNNFY FT IATNGDFALDYGFSVMGKTTSYWRENISREKILSFKHKSLPDNTVPTNRLLSTSTVKGI FT QLGSELAPETTIILSCKQNLGIDLKSQYRISFHGIQEEGAFARTFCIPFENKSRMICFY FT AKTVADNSNERTTLIIKIVTKTVDSHSMRPNRNHINCNKLMGARIGLVDFCDSDPNYNQ FT MIVKELLSVHTQFALNLSGALKKPIIVFKMYDKELINGHVEVSGRILNYQVDADGNVYF FT LSKTLEVLPRSLSTLSYLNSVAPTLWKESLEHQHFTVELQ" FT gene complement(2718..3545) FT /gene="N" FT CDS complement(2718..3545) FT /codon_start=1 FT /gene="N" FT /product="nucleocapsid protein" FT /db_xref="GOA:C5IJK3" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:C5IJK3" FT /protein_id="ACR45979.1" FT /translation="MSNVRQLTEKKIRELLAGGTADIEIETEDSTPGFSFKTFYDNNKS FT VEMTFTNCLNILKCRKQIFAACKSGKYKFCEKTIVSTDANVGPEDWTFKRTEALIRVKM FT INMVEKSKNESARQEMYAKVMELPLVAAYGLNIPALFDSCALRMMLCIGGPLPLLSSIK FT GLAPIIFPLAYYQNVKKEKLGIKNFSTYEQVCKVAKVLSASQIEFKEDLNTLFKQAVKL FT LSESNPGTASSISLKKYDEQVKYMDKAFSANLSVDDYGVHSKKSSKPSTSIEV" XX SQ Sequence 3612 BP; 1239 A; 579 C; 564 G; 1230 T; 0 other; agagcaatcg aggcttctaa taattcaaga taaacaacga taagatcaag aaatactact 60 tcaggcatgt ctactgtgaa gagtgctgct tcagaatttg tgaagagcta tggaacaagg 120 gataatagag ctgtcaatga ttgctattct gtattcaatg gagaaggtgt caatttcctc 180 aatctgttca tgcataacaa tgcaggtatt aaatctgcat tcagcatcaa tgatttggga 240 aggaacgaag atatcaaaat ccatgaagct gaggttgttg atacatgcca tgattataat 300 tactttgaga aatttggttt agacataaca ttctgtgaac atgtgatgag tttggtcgta 360 aggaaacctg gcataaagaa cacaggctgc aagttctcaa tgcataatca gatcttcaat 420 ccaaatgcca ataccctgtc tattgctccg ggaacgaccc tagaggaagg tttctatgag 480 aaaagtaaga taaaacccat tgagctcctt ccctcagact ggtgcttgga tgaatgctgg 540 aagaacaatt tttacatagc tactaatgga gactttgctt tggattatgg attctctgtg 600 atgggtaaaa caacttctta ctggagagag aacatctcta gggaaaagat cttatctttc 660 aaacataaaa gtctccctga taatactgtt ccaaccaata ggttgttatc cacatctact 720 gttaagggca ttcagttggg ttctgagcta gctcctgaaa ctacaattat tttgtcatgc 780 aaacaaaatc ttggtattga tctaaaatct cagtatcgca tttcatttca tggtattcaa 840 gaggaaggtg cttttgctag aactttctgc attccctttg aaaacaaatc tagaatgatt 900 tgcttttatg caaagacagt tgctgacaat agcaatgaaa gaacaacttt aattataaaa 960 atagtcacaa agactgttga ctctcattca atgagaccta acagaaatca tatcaactgc 1020 aataaactga tgggagcaag aattggttta gttgattttt gtgattctga tccaaattat 1080 aatcagatga ttgtaaagga gctgttaagt gttcataccc aatttgcact caacctatct 1140 ggagcattga aaaaaccaat cattgtattt aagatgtatg ataaggaatt gataaatggg 1200 catgtagaag tttcaggaag gattctgaat taccaggtag atgctgatgg aaatgtttat 1260 tttctctcaa aaaccctgga ggtcctccca agatccctat caaccttaag ttacttaaat 1320 agtgttgcac caacactatg gaaagaatcc ttagagcatc aacatttcac tgtggagctc 1380 caataaattt tatgagtgtt aactttattt aatattatat aatctgcatt attcaagtta 1440 atgtaattat aatgtaagca ctataaacaa gaataaacat agttaatata aataaataag 1500 cataatataa atagatataa atagataaat aaatttatgt ttaaatttaa gttattcata 1560 agttagttaa ttatgttatc atatatttaa atcattgaaa tgttgtctta atataagtaa 1620 gtttaagttg tataatcaaa acaaaaaata acaagcaaaa acccataaaa actaaaaaac 1680 agaaaatcca aaaagacctc gaaagaggca aatttggctt aagtattttg aatgatttaa 1740 tttattatgg catctttgaa tctataaatt tagataatac ttgaatctta ttagtttaaa 1800 cacttattgt ttgcatgctg aagatataaa tgaagttaag ctcttagcta agtacttaac 1860 tcatgaagtt ttgatgacca taacaacttt ctgattatta aattcaattc aaacaaagct 1920 atgcctattc tagtaagatt gttcattact aacagtactc aactttagtt tgtctagagt 1980 atttctattt acatttttgg aatataagga aattatatat cattagaagc atttaaattc 2040 cttaacttgt acatttggtt tattggggtt agctaacaat gatgacttct aatctgttta 2100 gtttgattta ctcaaagttt tacttccagt taaactaaat agagccatgt cctacttgct 2160 tagaatagct aattccaaag ttagttcatt taacaaatct gtctatttaa aactatctat 2220 gtaaatctat ttagatcaga gtatctaact tctccaaaat tccagtgtaa taacttcatt 2280 tgatcagtta cttgaaagat ctaatcaaat tacctatgag agaataaact aatttataga 2340 gctcaatatg atatttaaat ttatgattag ataaaccaat agtttgcctc cgaagaggtc 2400 ttttttggtt tttctatttt ttgatttttt tggatttttt aagtgttttg aatctaagtt 2460 gtctatagat acatggatat acatgtctta attataatat atatctatag ttgtaaacac 2520 acttatactt acttgagtaa ttatatatat ttatgtttat gtgtatataa ctaataaaca 2580 caaacaataa aagttttata tatttagttt ataacatgac aatagattaa tatgaattga 2640 cttataattg aatataacat acatttatat atatataaaa acatatattc taatataagt 2700 agttacaact atttaaatta cacctctata gaagtactag gctttgagct cttctttgaa 2760 tgaacaccat aatcatccac agacaaattg gcactaaacg ctttgtccat atacttgact 2820 tgctcatcat acttcttaag tgagatagaa ctagcagtac cagggttgct ctcactaagc 2880 aacttgacag cctgtttgaa caatgtgttc agatcttcct taaattctat ttgagaagca 2940 gaaagaactt tagccacttt gcaaacctgt tcataggtag agaagttttt gatgcccaat 3000 ttctcttttt taacattttg gtaataagct aatgggaaaa taattggtgc aaggccttta 3060 atgctggata atagtggtag aggaccacca atgcataaca tcatcctgag agcacatgaa 3120 tcaaacaaag caggtatgtt caatccatat gctgccacta aaggtaattc catcaccttt 3180 gcatacatct cttgcctagc actttcattc ttactctttt ctaccatgtt gatcatctta 3240 actcttatta aagcttctgt tctcttaaaa gtccaatcct ccggaccaac attagcgtct 3300 gtagaaacaa ttgttttttc acagaactta tactttccac ttttgcaagc agcaaaaatc 3360 tgctttctac acttcaaaat attaagacag tttgtgaaag tcatttcaac gctcttgtta 3420 ttatcataga atgtcttgaa actgaatcca ggagttgaat cctcagtctc aatttcaata 3480 tctgcagttc caccagccaa gagttctcta attttcttct cggtaagttg cctgacgtta 3540 gacatggtgt ttactatgga aacgtctgat atgatgactt taaacggatt ttattagtgc 3600 ctcgattgct ct 3612 //