ID   FJ946835; SV 1; linear; genomic RNA; STD; VRL; 1133 BP.
XX
AC   FJ946835;
XX
DT   07-JAN-2010 (Rel. 103, Created)
DT   23-SEP-2011 (Rel. 110, Last updated, Version 3)
XX
DE   Tomato necrotic ringspot virus nucleocapsid (N) gene, complete cds.
XX
KW   .
XX
OS   Tomato necrotic ringspot virus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes;
OC   Bunyavirales; Tospoviridae; unclassified Tospoviridae.
XX
RN   [1]
RP   1-1133
RA   Hassani-Mehraban A., Cheewachaiwit S., Relevante C., Kormelink R.,
RA   Peters D.;
RT   "Tomato necrotic ring virus (TNRV), a recently described tospovirus species
RT   infecting tomato and pepper in Thailand";
RL   Eur. J. Plant Pathol. 130(4):449-456(2011).
XX
RN   [2]
RP   1-1133
RA   Hassani-Mehraban A., Cheewachaiwit S., Relevante C., Saaijer J.,
RA   Kormelink R., Peters D.;
RT   ;
RL   Submitted (21-APR-2009) to the INSDC.
RL   Laboratory of Virology, Wageningen University, Binnenhaven 11, Wageningen
RL   6709 PD, The Netherlands
XX
DR   MD5; bb17ee98ea703ff4c0ec662da16aa576.
DR   EuropePMC; PMC4263035; 25465801.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1133
FT                   /organism="Tomato necrotic ringspot virus"
FT                   /host="Solanum lycopersicum (tomato)"
FT                   /mol_type="genomic RNA"
FT                   /country="Thailand"
FT                   /isolation_source="leaf"
FT                   /collection_date="30-Mar-2008"
FT                   /db_xref="taxon:584711"
FT   gene            complement(222..1067)
FT                   /gene="N"
FT   CDS             complement(222..1067)
FT                   /codon_start=1
FT                   /gene="N"
FT                   /product="nucleocapsid"
FT                   /db_xref="GOA:B8Y670"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:B8Y670"
FT                   /protein_id="ACX47023.1"
FT                   /translation="MSNVRKTLSNEKIKELLAGGEADIEIELDEATPGFSFSKFYDENK
FT                   QDIFGKFTFNNGITILKSRKQIFAACKSNQFVFCGKQIAQNSDTADEKTWTFKRTEAVL
FT                   RVLMAKMVEECTTQKLQQDMYSKLMSLPMVIAYGLNVPPNFDSCATRLMLCVGGPLPLL
FT                   SSLPAMAPIAFSLAYFQNVKKQNLGIKNFSTYEQLCKVARVCDAAQVEFTGDLKKLFES
FT                   ATAILKTSSPGTASSISLKKYSEQIAHLEKAFGSKPVIDDFGSNSVSTSKPTRRGSIGL
FT                   "
XX
SQ   Sequence 1133 BP; 322 A; 221 C; 187 G; 403 T; 0 other;
     ttttgttttt gttttttgtt tttgtatttt gtttttgttt tatttgttta tttgtatatt        60
     aagtaacttt atttatatta cacactcaac agacatattc aaattacaaa ctaaacttat       120
     ataatttata tgtattctaa aacctttacg gaatatatca aacacacaca aacaaacaca       180
     cactttcact atctgatata aatgatcctg taatgtaatc tttacagtcc tatacttcct       240
     ctcctagttg gcttgctagt actcacacta ttgctcccaa aatcatcaat gactggcttg       300
     gatccaaatg ctttctcaag atgagcaatc tgttctgagt atttcttcaa ggatattgag       360
     ctagctgttc caggtgagct agtcttcaaa atagctgttg cagattcgaa caatttcttc       420
     aaatcaccgg taaattcaac ttgagcagca tcacacactc gagcaacctt acatagctgt       480
     tcatatgtag aaaagttttt tattccgaga ttctgttttt tgacattctg gaaatatgca       540
     agagagaaag ctataggtgc cattgcaggg agactggaca ataaaggcaa aggaccgccg       600
     acacacagca tcagcctggt tgcacaggaa tcaaaattgg gaggtacatt caacccgtaa       660
     gcaataacca taggaagtga cataagtttt gaatacatat cttgctggag tttctgggtt       720
     gtgcattctt caaccatctt tgccatgaga actctaagga cagcttcagt tctcttgaat       780
     gtccatgtct tttcatcagc agtgtcagaa ttttgtgcta tctgctttcc acaaaagaca       840
     aactgattgc tcttgcaggc tgcaaatatc tgctttctac tctttagtat agttattcca       900
     ttgttgaacg taaattttcc gaagatgtcc tgtttgtttt catcatagaa tttagaaaag       960
     ctgaatcctg gtgtagcttc atcaagctct atttcaatgt ctgcttctcc tccagctagc      1020
     aattccttga ttttctcgtt tgacaaggtt ttcctaacgt tagacatgct gtttacgggt      1080
     gaaacaattt attagtagtt ttcagaaata ttcttttttg cctcgattgc tct             1133
//