ID   FJ944021; SV 1; circular; genomic DNA; STD; VRL; 2640 BP.
XX
AC   FJ944021;
XX
DT   01-MAY-2011 (Rel. 108, Created)
DT   01-MAY-2011 (Rel. 108, Last updated, Version 1)
XX
DE   Merremia mosaic Puerto Rico virus strain PR89 segment DNA-A, complete
DE   sequence.
XX
KW   .
XX
OS   Merremia mosaic Puerto Rico virus
OC   Viruses; Geminiviridae; Begomovirus.
XX
RN   [1]
RP   1-2640
RA   Idris A.M., Brown J.K.;
RT   "Merremia mosaic Puerto Rico virus is a new begomovirus species originating
RT   from Merremia quinquefolia an indigenous weed in Puerto Rico";
RL   Unpublished.
XX
RN   [2]
RP   1-2640
RA   Idris A.M., Brown J.K.;
RT   ;
RL   Submitted (20-APR-2009) to the INSDC.
RL   Plant Sciences, University of Arizona, Tucson, AZ 85721, USA
XX
DR   MD5; b38b2c73297822813ba9a00e572ba8a9.
XX
CC   GenBank Accession Numbers represent FJ944021-FJ944022 the complete
CC   genome of Merremia mosaic Puerto Rico virus strain PR89.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2640
FT                   /organism="Merremia mosaic Puerto Rico virus"
FT                   /segment="DNA-A"
FT                   /host="Merremia quinquefolia"
FT                   /strain="PR89"
FT                   /mol_type="genomic DNA"
FT                   /country="Puerto Rico"
FT                   /collection_date="Jan-1998"
FT                   /db_xref="taxon:714309"
FT   CDS             200..955
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /note="AV1"
FT                   /db_xref="GOA:F4MJ60"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="InterPro:IPR000650"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:F4MJ60"
FT                   /protein_id="ADC32510.1"
FT                   /translation="MPKRDAPWRSMAGTSKVSRNANYSPGGSSGPKSNRANTWVNRPMY
FT                   RKPRIYRMYRTPDVPRGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRF
FT                   CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV
FT                   KNDLRDRFQVMHKFYAKVTGGQYASNEQAIVKRFWKVNSHVVYNHQEAAKYENHTENAL
FT                   LLYMACTHASNPVYATLKIRIYFYDSIMN"
FT   CDS             complement(952..1350)
FT                   /codon_start=1
FT                   /product="REn"
FT                   /note="AC3"
FT                   /db_xref="GOA:F4MJ61"
FT                   /db_xref="InterPro:IPR000657"
FT                   /db_xref="UniProtKB/TrEMBL:F4MJ61"
FT                   /protein_id="ADC32513.1"
FT                   /translation="MDSRTGEPITAAQATSGVFIWEVPNPLYFKIIRVDRPMFTHSRVF
FT                   HIQIRANHNLRKALDLHKAYFNFQVWTTLTTASGQIYLSRFKFLVMKFLDNLGVISVNN
FT                   VIRAVSYATDRQYVNDVLEQHEIKFKFY"
FT   CDS             complement(1097..1513)
FT                   /codon_start=1
FT                   /product="TrAP"
FT                   /note="AC2"
FT                   /db_xref="GOA:F4MJ62"
FT                   /db_xref="InterPro:IPR000942"
FT                   /db_xref="UniProtKB/TrEMBL:F4MJ62"
FT                   /protein_id="ADC32512.1"
FT                   /translation="MTGQRKTPSSSPLRNHSTPPSIKPRHRFAKRQTRRKRIDLQCGCS
FT                   YYLHINCSNHGFTHRGTHHCSSSNEWRFYLGGSKSPLFQNNQGGPSNVHPQQSVPHTNS
FT                   RQPQPQESVGSPQSLLQFPSLDDFDDSFWADLFK"
FT   CDS             complement(1434..2483)
FT                   /codon_start=1
FT                   /product="Rep"
FT                   /note="AC1"
FT                   /db_xref="GOA:F4MJ63"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:F4MJ63"
FT                   /protein_id="ADC32511.1"
FT                   /translation="MPSVQRFRINAKNYFITYPKCSLTKEEALSQLQNLNTPVNKKFIK
FT                   ICRELHENGEPHLHVLIQFEGKYQCKNNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI
FT                   DKDGDTIEWGQFQIDGRSARGGQQSANDTYATALNSSSAEEAMQIIKEQQPQHFVLQYH
FT                   NLVSNITKIFHKPPEPWVPPFQMSTFINVPEIMMKWVDDNISDAAARPLRPISIIVEGP
FT                   SRTGKTIWARSLGPHNYLCGHIDLNPRIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT                   PSNCKYGKPIQIKGGIPTIFLCNPGPHSSYKEYLGEEKNKTLNDWAKKNAVFVTIEEPL
FT                   YSTVNQTSS"
XX
SQ   Sequence 2640 BP; 668 A; 517 C; 622 G; 833 T; 0 other;
     accggatggc cgaccgctgc ccttggtgtc cctctctctc ccacgtggtg ctttagtttg        60
     aattaaagat atgttttatg ctttgtccaa tcagatttgg tctggcgagt ctaggtattc       120
     gtgttcaaac ttagtgacca agtattaccg catataagta cgagttatct tatgtggagc       180
     cagacatctt taattcaaaa tgcctaagcg ggatgccccg tggcgttcta tggcgggaac       240
     ctccaaggtt agtcgaaacg ccaattattc tcctggtgga tcatctggcc caaaatccaa       300
     cagggccaat acttgggtta ataggcccat gtacaggaag cccaggatat atcggatgta       360
     taggaccccc gatgttccaa gaggctgtga aggcccatgt aaggtgcaat cctttgagca       420
     acgccatgat atctcacatg ttggcaaggt gatgtgtata tccgacgtga cacgtgggaa       480
     cggtataact caccgtgttg gtaagcgttt ttgtgttaag tccgtgtaca tactaggcaa       540
     gatatggatg gacgagaaca tcaagttgaa gaaccacacc aatagtgtta tgttttggtt       600
     agttagggat aggagaccat atggcactcc catggatttt gggcaagtgt ttaatatgtt       660
     tgacaatgag cctagtactg ctacggtcaa gaatgatctc cgtgatcgtt ttcaagtcat       720
     gcacaaattt tatgccaagg ttacaggtgg acaatatgct agtaatgagc aggcgattgt       780
     taagcgtttc tggaaggtga acagtcatgt tgtttataac caccaggaag ccgctaagta       840
     cgaaaatcat acggagaatg ctctattatt gtacatggca tgtactcatg cctctaaccc       900
     tgtgtatgct actttgaaaa ttcggatcta tttttatgat tcgataatga attaataaaa       960
     tttgaatttt atttcatgtt gttcaagtac atcatttaca tattgtctgt ccgttgcata      1020
     tgagacagct ctaattacat tattaactga aataacccct aaattgtcta agaatttcat      1080
     aacaagaaat ttgaatctac ttaaataaat ctgcccagaa gctgtcgtca aagtcgtcca      1140
     gacttggaaa ttgaagtagg ctttgtggag atccaacgct ttcctgaggt tgtggttggc      1200
     gcgaatttgt atgtggaaca ctctgctgtg ggtgaacatt ggacggtcca ccctgattat      1260
     tttgaaatag aggggatttg gaacctccca gataaaaacg ccactcgttg cttgagctgc      1320
     agtgatgggt tcccctgtgc gtgaatccat ggttgctgca gttaatgtgt aggtaatatg      1380
     aacaaccgca ctgcagatca attcttttac gtctcgtctg cctctttgcg aatctatgac      1440
     gaggtttgat tgacggtgga gtagagtggt tcctcaatgg tgacgaagac ggcgtttttc      1500
     tttgcccagt cattgagtgt tttgtttttt tcctctccga gatactcctt atatgatgaa      1560
     tgggggccag gattgcagag gaagatagtg ggaattccac ctttaatttg aattggcttt      1620
     ccgtatttgc agtttgatgg ccaatccctc tgggccccca tgaattcttt aaagtgcttg      1680
     agataatgcg gatctacgtc atcgatgacg ttataccatg catcattgga gtatatcctc      1740
     gggttgagat ctatatgtcc acatagataa ttgtgagggc ccaggctacg ggcccatatt      1800
     gttttgcccg ttcttgatgg tccttcaaca atgattgata taggtctcaa cggccgcgca      1860
     gcggcatcgg aaatattatc gtcgacccac ttcatcatta tttccggtac attaatgaac      1920
     gtggacattt gaaatggagg aacccatggt tccggaggtt tatggaatat tttcgttata      1980
     tttgaaacca gattgtgata ttggaggacg aaatgttgtg gttgttgttc cttaatgatc      2040
     tgcatcgcct cttctgcaga agatgaattc aacgccgtcg catatgtgtc gttagcagat      2100
     tgctgacctc ctctagcaga tctgccgtcg atttgaaatt gtccccattc gattgtatct      2160
     ccgtctttgt cgatgtagga cttgacgtcg gagctagact tagctccctg tatgttcgga      2220
     tggaaatgtg ctgacctggt tggggaaacc aagtcgaaga atctgttatt cttgcactgg      2280
     tatttccctt cgaactggat gagcacgtga agatgaggtt ccccattttc gtggagttct      2340
     ctgcatattt tgatgaactt cttgttgaca ggagtgttta ggttttgtaa ttgggaaagt      2400
     gcctcttctt tggttagaga gcacttgggg tatgtaatga aataattctt ggcatttatt      2460
     ctaaaacgct gaactgatgg cattctcgta ataaaaaggc tggacaccaa ttgaatgtac      2520
     ggagagacac caattgagct cttcaactcc ccccccttgt attggtgtct ggggtcttat      2580
     ttatagtata ccttctattc tttaattttt tgacacgtgg aggccatccg ttataatatt      2640
//