ID   FJ943301; SV 1; linear; genomic RNA; STD; VRL; 780 BP.
XX
AC   FJ943301;
XX
DT   03-JAN-2010 (Rel. 103, Created)
DT   20-JAN-2011 (Rel. 107, Last updated, Version 2)
XX
DE   Grapevine rupestris stem pitting-associated virus isolate ORPN1d
DE   collection-date Nov-2007 coat protein gene, complete cds.
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KW   .
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OS   Grapevine rupestris stem pitting-associated virus
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Foveavirus.
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RN   [1]
RP   1-780
RX   DOI; 10.1099/vir.0.014423-0.
RX   PUBMED; 19759241.
RA   Alabi O.J., Martin R.R., Naidu R.A.;
RT   "Sequence diversity, population genetics and potential recombination events
RT   in grapevine rupestris stem pitting-associated virus in Pacific North-West
RT   vineyards";
RL   J. Gen. Virol. 91(Pt 1):265-276(2010).
XX
RN   [2]
RP   1-780
RA   Alabi O.J., Martin R.R., Naidu R.A.;
RT   ;
RL   Submitted (19-APR-2009) to the INSDC.
RL   Department of Plant Pathology, Irrigated Agriculture Research and Extension
RL   Center, Washington State University, 24106 N. Bunn Rd., Prosser, WA 99350,
RL   USA
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DR   MD5; ca393aaaffe3753bb2ae14f1c59fea50.
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FH   Key             Location/Qualifiers
FH
FT   source          1..780
FT                   /organism="Grapevine rupestris stem pitting-associated
FT                   virus"
FT                   /host="Vitis vinifera"
FT                   /isolate="ORPN1d"
FT                   /mol_type="genomic RNA"
FT                   /country="USA:Pacific Northwest"
FT                   /collection_date="Nov-2007"
FT                   /db_xref="taxon:196400"
FT   CDS             1..780
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2E8M0"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProtKB/TrEMBL:D2E8M0"
FT                   /protein_id="ADA79769.1"
FT                   /translation="MASQIGKLPGESNEAFEARLKVLELARTQKQPEGSNTPPTLGGLL
FT                   AKRKRVIENALSKTGDMREVLKHETVVISPNVMDEGAIDELVRAFGESGIAESAQFDVA
FT                   IDIARHCSDVGSSQRSTLIGKSPFCDLNRSEIAGIIREVTTLRRFCMYYAKIVWNIHLE
FT                   TGIPPANWAKKGFNENEKFAAFDFFLGVTDESALEPKGGIKRAPTKAEMVANIAPFEVQ
FT                   VLRQAMAEGKRSSNLGEISGGTAGALINNPFSNVTHE"
XX
SQ   Sequence 780 BP; 237 A; 158 C; 203 G; 182 T; 0 other;
     atggcaagtc aaattggaaa actccctggc gagtctaatg aggcatttga agcccggcta        60
     aaagtgctgg aattggctag aactcagaag cagcccgaag gctccaacac accacccact       120
     ctcggtggct tgcttgcaaa acgtaagaga gttattgaaa atgcactctc taagacgggg       180
     gatatgagag aggtgctaaa acatgaaaca gtggtgattt ccccaaatgt tatggatgag       240
     ggtgcaatag atgagctggt tcgagcattt ggagagtctg gcatagctga aagcgcacaa       300
     tttgacgtgg ccatagatat tgcacgtcac tgttctgatg ttggtagctc ccaaaggtca       360
     actctgattg gcaaaagtcc attctgtgat ctgaacagat cagaaatcgc tggaatcata       420
     agggaggtga ccacattgcg cagattttgc atgtactatg caaaaatcgt gtggaatatc       480
     catctggaga cggggatacc accagctaat tgggccaaga aagggtttaa tgagaatgaa       540
     aaatttgcag cctttgactt ctttctggga gtcacagatg aaagtgcgct tgagccaaag       600
     ggtggaatca aaagagctcc aacaaaagct gagatggtcg ctaatatcgc cccttttgaa       660
     gttcaagtgc tcagacaagc tatggctgaa ggcaagcgga gttccaacct tggagagatt       720
     agtggtggaa cggctggtgc actcatcaac aaccccttct caaatgtcac acatgaataa       780
//