ID FJ907330; SV 1; linear; genomic RNA; STD; VRL; 3019 BP. XX AC FJ907330; XX DT 22-AUG-2009 (Rel. 101, Created) DT 22-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Japanese holly fern mottle virus isolate JM segment RNA2 p32, p37, and p29 DE genes, complete cds. XX KW . XX OS Japanese holly fern mottle virus OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-3019 RX DOI; 10.1099/vir.0.012674-0. RX PUBMED; 19570959. RA Valverde R.A., Sabanadzovic S.; RT "A novel plant virus with unique properties infecting Japanese holly fern"; RL J. Gen. Virol. 90(Pt 10):2542-2549(2009). XX RN [2] RP 1-3019 RA Sabanadzovic S., Valverde R.A.; RT ; RL Submitted (10-APR-2009) to the INSDC. RL Entomology & Plant Pathology, Mississippi State University, 100 Twelve RL Lane, Mississippi State, MS 39762, USA XX DR MD5; 7e3f26840092a0c38c44b2d5fb973d74. XX FH Key Location/Qualifiers FH FT source 1..3019 FT /organism="Japanese holly fern mottle virus" FT /segment="RNA2" FT /isolate="JM" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:659660" FT CDS 47..946 FT /codon_start=1 FT /product="p32" FT /note="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:C7T502" FT /protein_id="ACT67472.1" FT /translation="MSQVVKGSDLSSLLSDLYGEVTHRELQSMGLGTLVRSVVDEPHAV FT TLLVPPKTRSLWKGLFSRDPFVSRSTGYVYVPCVVRVFVPHVELGSPGFVTFHLSDSGL FT AGLTALKDQQVSVTLGGGPQIIAFYPSYSLPLCDVGTGHEKHGGRTFVIVSASTGASVA FT SGNSAFSTFDLWTPQFSARTTSCVARPAQALRITVGRVKQAFNSVLTPSLYASAVMTAE FT HFSEGDSPVSENVSLSKVTSVRRNHHLYVRPPALPEDHGVFSESTSPRKPHKPDRGARR FT VSSRLDPTLGVLEVSESD" FT CDS 1067..2068 FT /codon_start=1 FT /product="p37" FT /db_xref="GOA:C7T503" FT /db_xref="UniProtKB/TrEMBL:C7T503" FT /protein_id="ACT67473.1" FT /translation="MRGSSGLRRLGFRAVVPAVVVGGAVTGTIVHRALNNRGENRDLRD FT LRELRPLDVEEFTFPSTESASETTDVDSVAVDSVEALVPFDAVVEPEGPVVSPVSNPRR FT IWSRLFATMVTLSVPLAGIFVARHVAAQESVSVGDHHQHTDSFEPRDVPQPNEIPPHAV FT VEEGDPVACLPEDTRRFVRRCLIHLAYFEVVGVCPFCERDTLDTTSFETVVFEVVPLLF FT RRDFELVPSAVFDPHFWEPLCYYTLFQDMLVCKCGKHDRYHVVKTYPVMDVHPLNTVYM FT LFIVKEGFDEDRGYPVMSSFGYHIGWAFEPLGFSFESLDDALPSSSNNGTGR" FT CDS 2147..2953 FT /codon_start=1 FT /product="p29" FT /note="putative coat protein" FT /db_xref="UniProtKB/TrEMBL:C7T504" FT /protein_id="ACT67474.1" FT /translation="MAPKAFPKNSGVPKEYAFIGPKLWPKLQEAINLGFDIRKARDDGM FT TLSNLPYVEKEKVLNAFLKSKRKNSGSASTSNSGKMPVRDINSETSVTRVKTRKQKPTG FT VFMWEPASLIGVDGDPGKFAALPHGKSAVLLSFKPPASPCMISKMLVMLKVDATADLVI FT PYAGLTGIDHAGELAAEKYSVMVVNSRYPTMKLLEADDKISYRFTSDEPVSSELFSRIR FT FIVTTANVAKTKSWLYCQCWYKYRINKTPVEKGGRVMAVRFDAGAV" XX SQ Sequence 3019 BP; 641 A; 697 C; 777 G; 904 T; 0 other; gataaactta gacttacact gtgtaagttt gtcttctact tgtgacatgt ctcaagtagt 60 caaaggttcc gacctttcct ccttgctttc tgacctttat ggtgaagtta cacatagaga 120 gttgcaaagc atggggttgg gaactttggt aaggtctgtg gttgatgaac cgcacgctgt 180 gaccttactg gtacctccta aaactcgtag tttatggaag ggcttattct ctagggaccc 240 ttttgtgtcc cggagtaccg gttacgtata cgttccttgt gtggttcgtg tgttcgtacc 300 gcatgttgaa ctgggaagtc ctggtttcgt aactttccac ctttcggatt ctggtttggc 360 agggcttact gccctgaagg accaacaagt ttccgttacg ttaggtgggg gaccgcaaat 420 tattgcgttt tatcccagct actctttacc cttgtgcgat gttggcacag gacatgagaa 480 gcatggaggc agaacatttg ttattgtgtc tgcctcgact ggtgcctctg tcgcttctgg 540 aaactctgcg ttttcaacat tcgacctttg gacgccccag ttttctgcta gaacgacttc 600 gtgcgtggct aggcctgctc aagctctccg tataaccgtc ggacgagtta aacaggcgtt 660 taattcggta ctcacgccct cgctatatgc cagcgcggtg atgacagccg aacatttctc 720 ggaaggggat tcccccgtat ctgagaatgt gtcactgtct aaagtgacat ccgtacgtag 780 aaatcatcat ctttacgtgc ggccacccgc cttacctgaa gaccacgggg tcttttctga 840 atcgacttcg ccacgtaagc cccataagcc ggatcgggga gcccgacgtg tttcgtcgcg 900 tctcgatccg actttgggcg tgttggaagt ttcagagtca gactgatctc tagtgagcgt 960 ttactcgagt tcggattctc gccacgtcat ggtgttggag gtctgattcg agtaacgctc 1020 acggacctac tcttcattag tgattttgta aattttacag gtcacaatgc ggggttcttc 1080 aggtcttagg cgtttgggtt ttagggctgt tgtacctgcc gttgtggtag gtggtgccgt 1140 cacaggtacc atcgtacaca gagctcttaa caaccgcggg gagaatcgcg atctgcgtga 1200 tcttcgtgag ttgcgtcctc tggatgtgga ggaatttacc tttccttcaa ctgagtctgc 1260 atcagagacc acagatgtgg attctgttgc tgtcgattcc gttgaggcat tggtaccgtt 1320 cgacgctgtg gtggaaccgg agggaccggt tgtttcacct gtgtcgaatc cacgtcgcat 1380 ctggtcgcga ttgttcgcga ccatggtgac tctcagtgta cccttagcgg gtattttcgt 1440 cgctcgtcat gtcgcggctc aagaatcggt ctctgttggt gatcaccacc aacacactga 1500 ttcttttgag cctcgtgacg tgccgcagcc aaacgagatt cctcctcatg cagtcgttga 1560 ggagggagat cctgtagctt gtctaccaga ggatactcga cgttttgtta ggcgatgttt 1620 aattcaccta gcttacttcg aggtcgtggg tgtctgtccc ttttgcgaaa gggacactct 1680 tgatacgaca tctttcgaga ctgttgtctt tgaagtagtt ccccttttat ttcgaaggga 1740 ttttgagctt gttcccagcg cagtattcga tccccacttt tgggaaccgc tttgttacta 1800 tacattgttt caagatatgt tggtatgcaa atgcggtaaa catgatcgtt accatgtcgt 1860 gaagacttat cccgtcatgg acgttcatcc cctgaacaca gtttatatgt tgttcattgt 1920 caaagagggc tttgacgaag accgtggata tcctgtgatg tcctcttttg gataccacat 1980 tggatgggct tttgagccac tagggttttc gttcgagtcg ctcgacgacg ctttaccttc 2040 ctcgtcgaat aacggcaccg gtcggtaatt cactaacttt caactcgttg aaggttggta 2100 ttgtcttgat ttgttgtatt actacgttgt attacgattt atcgagatgg cacctaaggc 2160 atttccgaag aacagtggtg ttcccaagga atatgctttc attggaccga agctttggcc 2220 taagcttcaa gaggctatca atctgggttt tgacattcgc aaagctcggg atgatggcat 2280 gactcttagt aatctccctt atgtggagaa agagaaggtg cttaatgcct tcttgaagtc 2340 gaagcggaag aatagtgggt ccgcgtcgac ttcaaatagc ggtaaaatgc cggtacggga 2400 tattaattcc gagacttctg ttacgagggt taaaactcgc aaacaaaagc cgacgggcgt 2460 gtttatgtgg gaaccagcgt ctctaatcgg tgtcgatgga gaccctggga aatttgccgc 2520 tttacctcac ggtaaatcgg cggttttact ctcctttaaa ccgcccgcct caccttgcat 2580 gatcagtaag atgctggtca tgctaaaggt ggatgccact gcggatcttg tgattccgta 2640 tgctggttta acgggtattg atcatgccgg tgagcttgcc gctgagaaat acagcgttat 2700 ggtagtgaat tctaggtatc ctacgatgaa actacttgag gcggacgata agatttctta 2760 tcgttttacc tctgatgaac ctgtgtcgtc tgagttattc tcgcgtatca ggttcatcgt 2820 aaccacggct aacgtcgcta agactaaatc gtggttatat tgtcaatgtt ggtataagta 2880 ccgcattaac aaaacacccg ttgaaaaggg tggtcgcgtc atggccgtgc gctttgacgc 2940 tggtgctgtc taagacagca ccgcgtaccg ggttccggta cataccgtcg agacggtata 3000 gggacttagt ccccccccc 3019 //