ID FJ907329; SV 1; linear; genomic RNA; STD; VRL; 3006 BP. XX AC FJ907329; XX DT 22-AUG-2009 (Rel. 101, Created) DT 22-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Japanese holly fern mottle virus isolate HR segment RNA2 p32, p37, and p29 DE genes, complete cds. XX KW . XX OS Japanese holly fern mottle virus OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-3006 RX DOI; 10.1099/vir.0.012674-0. RX PUBMED; 19570959. RA Valverde R.A., Sabanadzovic S.; RT "A novel plant virus with unique properties infecting Japanese holly fern"; RL J. Gen. Virol. 90(Pt 10):2542-2549(2009). XX RN [2] RP 1-3006 RA Sabanadzovic S., Valverde R.A.; RT ; RL Submitted (10-APR-2009) to the INSDC. RL Entomology & Plant Pathology, Mississippi State University, 100 Twelve RL Lane, Mississippi State, MS 39762, USA XX DR MD5; 60404b9b0522b4c3aec957585fdf3ac8. XX FH Key Location/Qualifiers FH FT source 1..3006 FT /organism="Japanese holly fern mottle virus" FT /segment="RNA2" FT /isolate="HR" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:659660" FT CDS 46..942 FT /codon_start=1 FT /product="p32" FT /note="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:C7T4Z9" FT /protein_id="ACT67469.1" FT /translation="MSQVIKGSDLTALLSDLYGEVTHKELKSMGLGTLVRSVVDEPTAV FT TLLVPPKTRSLWKDLFSKDPVSRSTGYVYVPCVVRVFVPHVELGSPGFVTFHLSDSGLA FT GLVALRDQTVSVTLGEGPQIIAFYPSYSLPLCDSGTGQTKHGGRTFVIVSASTGASVAS FT GNSAFSTFDLWTPQFSARTTSCVARPAQALRITVGRVKQAFNSVLTPSLYASAVMTAEH FT FSEGDSPVSENVSLSKVTSVRRNHHLYVRPPALPEDHGVFSESTSPRKPHKPDRGARRV FT SSRLDPGMSVLEVSESE" FT CDS 1063..2064 FT /codon_start=1 FT /product="p37" FT /db_xref="UniProtKB/TrEMBL:C7T500" FT /protein_id="ACT67470.1" FT /translation="MKGASGLRRLGFRAVVPAVVVGGAVAGTVVHRALNNRGGDGENLR FT DLRELRPLEVEEFTISSGDSVAESIDIDSAAVNSAADLVPFDAVLEPEEPVTLPVSNPR FT RIWSRLFAAMVTLSVPLAGVFAVRHVTGQGSVSAGDDLRSEPFEPRDVPRPDEIPPHAA FT VEEGDPVACLPEDSRRFVKRCLDHLAYFELIGVCPFCERDGLKSISFETVVFEEVPPLF FT VRKFELIPSAVFDPHFWEPVCYYTLFHDTLVCKCGKHDKFQMVAILPVMDVHPLNTVYM FT LFIVKEGFDVDRGFPVMSSYGYHVGWAFEPLTIPLEPFDGTEPLPLHNETGR" FT CDS 2142..2939 FT /codon_start=1 FT /product="p29" FT /note="putative coat protein" FT /db_xref="UniProtKB/TrEMBL:C7T501" FT /protein_id="ACT67471.1" FT /translation="MAPKALPKNVPKEYAFIGPKLWPKLQEAISYGFDIRKARDDGMTL FT SNLPFVEKEKVLNAFLKSKRKSGSSSSSTTGKVPVRDVPESSVARKEKPRKQKPTGVFM FT WEPASLIGVDGDPGKFAALPHGKSAVLLSFKPPASPCMISKMLIMLKVDATADLVVPYA FT GITGIDHAGDLAADRYSVMVVNSRYPTMKLLEADDKISYRFTFDEPVSSDLFSRIRFIV FT TTANVAKTKSWLYCQCWYKCRINKTPVEKGGRVMAVRFDAGAV" XX SQ Sequence 3006 BP; 616 A; 702 C; 809 G; 879 T; 0 other; gataaactta gaacttgctt ttgtaagttt atccttactt gtgctatgtc tcaagtaatc 60 aaaggttctg accttacagc cctactttcc gacctttatg gtgaagttac acacaaggag 120 ttgaagagta tggggttagg aactttggta agatcagtgg ttgatgaacc aaccgctgtt 180 accttactgg tccctcctaa aactagaagt ttatggaagg acttattctc taaggaccct 240 gtgtcccgga gtaccggtta cgtttacgtt ccctgtgtgg ttcgcgtatt cgttccgcat 300 gttgaactag gaagtcctgg ttttgtaact tttcaccttt cggattctgg gctagctgga 360 ctagtggccc ttagggacca gacagtttcc gtaacgttgg gtgagggacc gcaaattatt 420 gcgttttatc ccagctactc gctgcctttg tgtgattctg gcacagggca gacgaagcat 480 ggaggtagga catttgttat tgtgtctgcc tcgactggtg cctctgtcgc ttctggaaac 540 tctgcgtttt caacattcga cctttggacg ccccagtttt ctgctagaac gacttcgtgc 600 gtggctaggc ctgctcaagc tctccgtata accgtcggac gagttaaaca ggcgtttaat 660 tcggtactca cgccctcgct atatgccagc gcggtgatga cagccgaaca tttctcggaa 720 ggggattccc ccgtatctga gaatgtgtca ctgtctaaag tgacatccgt acgtagaaat 780 catcatcttt acgtgcggcc acccgcctta cctgaagacc acggggtctt ttctgaatcg 840 acttcgccac gtaagcccca taagccggat cggggagctc gacgtgtatc gtcgcgtctc 900 gatccaggta tgagcgtgtt ggaagtttcg gagtctgaat gatcttgttg tgggtgtcgc 960 tcacattcaa tctcgccacg taatggtgtt ggagattcga atttgagtga tactcgcgga 1020 aactcactct ccattagtga tttgttattg ttacatatca cgatgaaggg tgcttcagga 1080 cttaggcgtt tgggtttcag agctgttgta cctgcagttg tcgtcggcgg tgccgtcgct 1140 ggcactgtgg tacacagagc tctgaacaac cgcggggggg acggggagaa cctccgtgac 1200 cttcgtgagt tgcgtcctct tgaagttgag gagtttacca tttcctcggg tgattctgtg 1260 gcggagtcaa ttgatattga ctccgctgcc gttaattcag ccgcggattt ggtaccgttc 1320 gacgctgtgt tggaaccgga ggagccggtt actctgcctg tgtcgaaccc acgtcgcatc 1380 tggtcgcgtt tattcgcggc tatggtgact ctcagtgtac ccttggcggg tgttttcgct 1440 gtgcgccacg tcactgggca aggttccgtg tccgcgggtg atgacctgcg gtctgagcct 1500 tttgagcccc gtgatgtacc gcgtcctgac gaaatcccac ctcacgcagc agttgaggag 1560 ggagatcctg tggcttgttt gccggaggat tctcggcgtt ttgttaagcg gtgtttagac 1620 cacttagcat acttcgagct tatcggtgtc tgtccctttt gtgaaagaga tggactcaag 1680 tcgatatctt tcgagaccgt tgtctttgag gaagttcctc ccttattcgt aaggaagttt 1740 gaacttattc cgagcgcggt gttcgacccc cacttttggg agccggtttg ttactatacg 1800 ttgtttcatg acacgttggt atgcaagtgc ggtaagcatg acaagttcca gatggtggct 1860 attttgcccg tcatggacgt tcatcccctg aacaccgttt atatgttgtt cattgtcaaa 1920 gagggtttcg atgttgatcg tgggtttccc gtgatgtcct cttatggtta tcacgttggt 1980 tgggcctttg agccactcac gattccattg gaacctttcg acggtaccga accgctgccg 2040 ttacataacg agaccggtcg gtaagttact aactttcaac tcgttgaagg ttggtattgt 2100 cttgatctgt tgttctacta cgttgtatta cactcatcga gatggcacct aaggcactcc 2160 cgaagaatgt tcctaaggag tatgctttta ttggaccgaa gctttggcct aagcttcaag 2220 aggctattag ttacggcttt gatattcgca aggcccgtga cgatggtatg actcttagta 2280 atctcccgtt tgtggagaag gagaaggtcc ttaatgcctt cttgaagtcg aagaggaaga 2340 gtgggtcctc gtcgtcttca accaccggga aggtcccggt gcgggatgtt cccgagtctt 2400 ctgttgcgag gaaagaaaaa cctcgtaagc agaagccgac gggtgtgttt atgtgggaac 2460 cggcttctct catcggtgta gatggggatc ctggtaagtt cgctgctcta cctcatggta 2520 agtcagcggt cttgctctca tttaaaccgc ctgcctcacc ttgcatgatc agcaaaatgt 2580 tgatcatgtt aaaggtggac gccacagcgg accttgttgt tccgtacgcg ggtataacgg 2640 gtatcgatca tgccggcgat cttgccgctg ataggtatag cgttatggtg gtgaattcta 2700 ggtatcctac gatgaagcta cttgaggcag acgataagat ttcttatcgt tttacctttg 2760 atgaacctgt ttcgtcagac ttgttctccc gtatcaggtt catcgtaacc acggctaatg 2820 tcgctaagac taagtcgtgg ttatattgtc aatgttggta caagtgccgc attaacaaaa 2880 cgcccgttga aaagggtggt cgcgtcatgg ccgtgaggtt cgacgctggt gctgtctgag 2940 acagcaccac gtaccgagat tcggtacata ccgtcgagga cggtataggg gcaaagcccc 3000 cccccc 3006 //