ID FJ907328; SV 1; linear; genomic RNA; STD; VRL; 3007 BP. XX AC FJ907328; XX DT 22-AUG-2009 (Rel. 101, Created) DT 22-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Japanese holly fern mottle virus isolate DI segment RNA2 p32, p37, and p29 DE genes, complete cds. XX KW . XX OS Japanese holly fern mottle virus OC Viruses; Riboviria; dsRNA viruses. XX RN [1] RP 1-3007 RX DOI; 10.1099/vir.0.012674-0. RX PUBMED; 19570959. RA Valverde R.A., Sabanadzovic S.; RT "A novel plant virus with unique properties infecting Japanese holly fern"; RL J. Gen. Virol. 90(Pt 10):2542-2549(2009). XX RN [2] RP 1-3007 RA Sabanadzovic S., Valverde R.A.; RT ; RL Submitted (10-APR-2009) to the INSDC. RL Entomology & Plant Pathology, Mississippi State University, 100 Twelve RL Lane, Mississippi State, MS 39762, USA XX DR MD5; 20e4e1e31679a203951b16c233d603d7. XX FH Key Location/Qualifiers FH FT source 1..3007 FT /organism="Japanese holly fern mottle virus" FT /segment="RNA2" FT /isolate="DI" FT /mol_type="genomic RNA" FT /country="USA" FT /db_xref="taxon:659660" FT CDS 46..942 FT /codon_start=1 FT /product="p32" FT /note="putative movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:C7T4Z6" FT /protein_id="ACT67466.1" FT /translation="MSQVIKGSDLTALLSDLYGEVTHKELKSMGLGTLVRSVVDEPTAV FT TLLVPPKTRSLWKDLFSKDPVSRSTGYVYVPCVVRVFVPHVELGSPGFVTFHLSDSGLA FT GLVALRDQTVSVTLGEGPQIIAFYPSYSLPLCDSGTGQTKHGGRTFVIVSTSTGASVES FT GNSAFSTFDLWTPQFSARTTSCVARPAQALRISVGRVKQAFDSVLTPSLYASAVMTAEH FT YSDRDDPVPDDVSLTRVTSVRRNHHLYVRPDVLPEGHGNFHFPASPRKSHKPDRGVRRV FT SSRLDPGMSVLEVSESE" FT CDS 1063..2064 FT /codon_start=1 FT /product="p37" FT /db_xref="UniProtKB/TrEMBL:C7T4Z7" FT /protein_id="ACT67467.1" FT /translation="MKGASGLRRLGFRAVVPAVVVGGAVAGTVVHRALNNRGGDGENLR FT DLRELRPLEVEEFTISSGDSVAESIDIDSAAVNSAADLVPFDAVLEPEEPVTLPVSNPR FT RIWSRLFAAMVTLSVPLAGVFAVRHVTGQGSVSAGDDLRPEPFGPRDVPRPDEIPPHAA FT VEEGDPVACLPEDSRRFVKRCLDHLAYFELVGVCPFCERDGLKSISFEAVVFEEVPPLF FT VGKFELIPSAVFDPHFWEPLCYYTLFQDMLVCKCGKHDRYHVVKIYPVMDVHPLNTVYM FT LFIVKEGFDVDRGFPVMSSYGYHVGWAFEPLTIPLEPFDGTEPLPLHNETGR" FT CDS 2142..2939 FT /codon_start=1 FT /product="p29" FT /note="putative coat protein" FT /db_xref="UniProtKB/TrEMBL:C7T4Z8" FT /protein_id="ACT67468.1" FT /translation="MAPKALPKNVPKEYAFIGPKLWPKLQEAISYGFDIRKARDDGMTL FT SNLPFVEKEKVLNAFLKSKRKSGSSSSSTTGKVPVRDVPESSVARKEKPRKQKPTGVFM FT WEPASLIGVDGDPGKFAALPHGKSAVLLSFKPPASPCMISKMLIMLKVDATADLVVPYA FT GITGIDHAGDLAADRYSVMVVNSRYPTMKLLEADDKISYRFTFDEPVSSDLFSRIRFIV FT TTANVAKTKSWLYCQCWYKYRINKTPVEKGGRVMAVRFDAGAV" XX SQ Sequence 3007 BP; 617 A; 699 C; 804 G; 887 T; 0 other; gataaactta gaacttgctt ttgtaagttt atccttactt gtgctatgtc tcaagtaatc 60 aaaggttctg accttacagc cctactttcc gacctttatg gtgaagttac acataaggag 120 ttgaagagta tggggttagg aactttggta agatcagtgg ttgatgaacc aaccgctgtt 180 accttactgg tccctcctaa aactagaagt ttatggaagg acttattctc taaggaccct 240 gtgtcccgga gtaccggtta cgtttacgtt ccctgtgtgg ttcgcgtatt cgttccgcat 300 gttgaactag gaagtcctgg ttttgtaact tttcaccttt cggattctgg gctagctgga 360 ctagtggccc ttagggacca gacagtttcc gtaacgttgg gtgagggacc gcaaattatt 420 gcgttttatc ccagctactc gctgcctttg tgtgattctg gcacagggca gacgaagcat 480 ggaggtagga catttgttat tgtgtctacc tcgactggtg cgtccgtcga atctgggaac 540 tcagcgttct ccacttttga cctttggact cctcagtttt ctgctaggac gacttcttgc 600 gtcgctagac ccgctcaagc gctccgcatt tctgtcggac gcgttaagca ggcgttcgat 660 tcggtactca caccttcact gtatgccagc gcggtgatga cagccgaaca ttattcggac 720 agggatgacc ctgtacctga tgatgtgtca ctaactagag tgacgtccgt gcgtagaaat 780 catcatcttt acgtgcggcc agacgtcttg cctgaaggtc acgggaactt tcattttcct 840 gcttcgccac gtaagtctca taaacccgat cggggtgttc gacgtgtatc gtcgcgtctc 900 gatccaggta tgagcgtgtt ggaagtctcg gagtctgaat gatcttgtcg tgggtgtcgc 960 tcacattcaa tctcgccacg taatggtgtt ggagattcga atttgagtga tactcgcgga 1020 aactcactct ccattagtga tttgttattg ttacatatca cgatgaaggg tgcttcagga 1080 cttaggcgct tgggtttcag agctgttgta cctgcagttg tcgtcggcgg tgccgtcgct 1140 ggcactgtgg tacacagagc tctgaacaac cgcggagggg acggggagaa tctccgtgac 1200 cttcgtgagt tgcgtcctct tgaagttgag gagtttacca tttcctcggg tgattctgtg 1260 gcggagtcaa ttgatattga ctccgctgcc gttaattcag ccgcggattt ggtaccgttc 1320 gacgctgtgt tggaaccgga ggagccggtt actctgcctg tgtcgaaccc acgtcgcatc 1380 tggtcgcgtt tattcgcggc catggtgact ctcagtgtac ccttggcggg tgttttcgct 1440 gtgcgccacg tcactgggca aggttccgtg tccgcgggtg atgacctgcg gcctgagcct 1500 tttgggcccc gtgatgtacc gcgtcctgac gaaatcccac ctcacgcagc agttgaggag 1560 ggagatcctg tggcttgttt gccggaggat tctcggcgtt ttgttaagcg gtgtttagac 1620 cacttagcat acttcgagct tgtcggtgtc tgtccctttt gtgaaagaga tggactcaag 1680 tcgatatctt tcgaggccgt tgtctttgag gaagttcctc ccttattcgt agggaagttt 1740 gaacttattc cgagcgcggt gttcgatccc cacttttggg aaccgctttg ttactataca 1800 ttgtttcaag atatgttggt atgcaaatgc ggtaaacatg atcgttacca tgtcgtgaag 1860 atttatcccg tcatggacgt tcatcccctg aacacagttt atatgttgtt cattgtcaaa 1920 gagggtttcg atgttgatcg tgggtttccc gtgatgtcct cttatggtta tcacgttggt 1980 tgggcctttg agccactcac gattccattg gaacctttcg acggtaccga accgctgccg 2040 ttacataacg agaccggtcg gtaagttact aactttcaac tcgttgaagg ttggtattgt 2100 cttgatctgt tgttttacta cgttgtatta cactcatcga gatggcacct aaggcactcc 2160 cgaagaatgt tcctaaggag tatgctttta ttggaccgaa gctttggcct aagcttcaag 2220 aggctatcag ttacggcttt gatattcgca aggcccgtga cgatggtatg actcttagta 2280 atctcccgtt tgtggagaag gagaaggtcc ttaatgcctt cttgaagtcg aagaggaaga 2340 gtgggtcctc gtcgtcttca accaccggga aggtcccggt gcgggatgtt cccgagtctt 2400 ctgttgcgag gaaagaaaaa cctcgtaagc agaagccgac gggtgtgttt atgtgggaac 2460 cggcttctct catcggtgta gatggggatc ctggtaagtt cgctgctcta cctcatggta 2520 agtcagcggt cttactctcc tttaaaccgc ccgcctcacc ttgcatgatc agcaaaatgt 2580 tgatcatgtt aaaggtggac gccacagcgg accttgttgt tccgtatgcg ggtataacgg 2640 gtatcgatca tgccggcgat cttgccgctg ataggtatag cgttatggtg gtgaattcta 2700 ggtatcctac gatgaagcta cttgaggcag acgataagat ttcttatcgt tttacctttg 2760 atgaacctgt ttcgtcagac ttgttctctc gtatcaggtt catcgtaacc acggctaatg 2820 tcgctaagac taagtcgtgg ttatattgtc aatgttggta caagtaccgc attaacaaaa 2880 cgcccgttga aaagggtggt cgcgtcatgg ccgtgaggtt cgacgctggt gctgtctgag 2940 acagcaccac gtaccgagat tcggtacata ccgtcgagga cggtataggg gcaaagcccc 3000 ccccccc 3007 //