Dbfetch

Dbfetch

ID   FJ903429; SV 1; linear; genomic RNA; STD; VRL; 696 BP.
XX
AC   FJ903429;
XX
DT   18-NOV-2009 (Rel. 102, Created)
DT   18-NOV-2009 (Rel. 102, Last updated, Version 1)
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DE   Hosta virus X isolate TnMt6 triple gene block protein 1 (TGB1) gene,
DE   complete cds.
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KW   .
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OS   Hosta virus X
OC   Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus.
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RN   [1]
RC   Publication Status: Available-Online prior to print
RP   1-696
RX   DOI; 10.1007/s00705-009-0522-6.
RX   PUBMED; 19838620.
RA   Fajolu O.L., Wen R.H., Windham A.S., Windham M.T., Moulton J.K.,
RA   Hajimorad M.R.;
RT   "Genetic variability and phylogenetic analysis of hosta virus X";
RL   Arch. Virol. 154(12):1909-1916(2009).
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RN   [2]
RP   1-696
RA   Fajolu O.L., Wen R.H., Hajimorad M.R.;
RT   ;
RL   Submitted (08-APR-2009) to the INSDC.
RL   Entomology and Plant Pathology, University of Tennessee, 2431 Joe Johnson
RL   Drive, 205 Ellington Plant Science Building, Knoxville, TN 37996, USA
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DR   MD5; 9e1dd2b7b5fa8a1d4506cf8bca9c6f26.
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FH   Key             Location/Qualifiers
FH
FT   source          1..696
FT                   /organism="Hosta virus X"
FT                   /host="Hosta sp."
FT                   /isolate="TnMt6"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /note="collected between August 2007 and March 2008"
FT                   /db_xref="taxon:214439"
FT   gene            1..696
FT                   /gene="TGB1"
FT   CDS             1..696
FT                   /codon_start=1
FT                   /gene="TGB1"
FT                   /product="triple gene block protein 1"
FT                   /db_xref="GOA:D1GFI7"
FT                   /db_xref="InterPro:IPR027351"
FT                   /db_xref="UniProtKB/TrEMBL:D1GFI7"
FT                   /protein_id="ACY71478.1"
FT                   /translation="MATFASFLSSTRPDFERTNTPLTKPLVIHAVAGAGKTTLLRDFLR
FT                   ANPLTNAQTLGTPDCPTLDGAYIRPFSGPVANLVNILDEYTAQPVTGSWDVLIADPLQH
FT                   YERAKLPHYICKRSHRLCPATARLLRKLGLDIHSYREDESEISFSDIFSGQLEGTVLPL
FT                   TPLCKDLLERHSCPFKCPSEFIGEQDDIITVVSEIPLSKHPDKTALYRALTRHTRRLNV
FT                   LAPPPYPTP"
XX
SQ   Sequence 696 BP; 165 A; 245 C; 149 G; 137 T; 0 other;
     atggcaacat tcgccagctt cctttcttct actaggcctg acttcgaacg tactaacact        60
     cctctaacca aaccactagt cattcacgcg gtggcaggcg cgggcaaaac cacactcctc       120
     cgcgacttcc tcagggccaa cccactaact aatgctcaga ctctgggaac gccagactgc       180
     cccactctgg acggagctta cataaggcct ttctcaggac cagttgcaaa tctcgtcaac       240
     attcttgacg aatacacggc gcagcccgtc accggctcct gggatgtcct cattgcagac       300
     cccctccaac actacgagag ggcaaagctc ccacactaca tctgcaagcg atcacaccgc       360
     ctctgcccgg caactgctcg actgctgaga aagctcggcc tcgacattca ctcttaccgg       420
     gaggacgagt cggagatctc cttctccgac atattcagcg gtcaactcga aggcactgtt       480
     ctcccgctta ccccactctg caaagacctt cttgagaggc actcctgccc cttcaaatgt       540
     ccatctgagt tcataggcga gcaggacgac attatcaccg tggtgagcga gattcctctg       600
     agcaagcacc cagacaagac ggccctgtac agggcgctga cgaggcacac gcggagactc       660
     aatgtcctcg ccccaccgcc ttaccccacc ccctaa                                 696
//