ID   FJ896160; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   FJ896160;
XX
DT   01-JAN-2010 (Rel. 103, Created)
DT   15-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Cucumber mosaic virus isolate Nigeria coat protein gene, complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-657
RX   DOI; 10.1111/j.1365-3059.2010.02285.x.
RX   AGRICOLA; IND44393280.
RA   Salem N.M., Ehlers J.D., Roberts P.A., Ng J.C.K.;
RT   "Biological and molecular diagnosis of seedborne viruses in cowpea
RT   germplasm of geographically diverse sub-Saharan origins";
RL   Plant Pathol. 59(4):773-784(2010).
XX
RN   [2]
RP   1-657
RA   Salem N.M., Ng J.C.K.;
RT   ;
RL   Submitted (05-APR-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California Riverside, 900
RL   University Avenue, Riverside, CA 92521, USA
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DR   MD5; 2934b75d87630064a52dab82d24730b9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="cowpea"
FT                   /isolate="Nigeria"
FT                   /mol_type="genomic RNA"
FT                   /country="Nigeria"
FT                   /db_xref="taxon:12305"
FT   CDS             1..657
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2E419"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:D2E419"
FT                   /protein_id="ADA63484.1"
FT                   /translation="MDKSDSASAGRNRRRRPRRGSRSASSSADVNFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLVLPESVTDFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVTAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSPMRADIGDMRKYAVLVYSKDDALESDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 148 A; 171 C; 154 G; 184 T; 0 other;
     atggacaaat ctgactcagc cagcgccggt cgtaaccgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg cttcctcctc cgcggatgtt aactttagag tcctgtcgca gcaactttcg       120
     cggcttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtaggg       180
     agtgagcgtt gtaaacctgg atacacgttc acgtctatta ccctaaagcc accaaaaata       240
     gaccgcgggt cttattatgg taaaaggttg gttttacctg agtcagtcac ggatttcgat       300
     aagaaacttg tttcgcgcat tcaaattcga gttaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagtccgtaa agttcctgcc tcttcggact tgtccgtcac cgccatttct       420
     gctatgtttg cggacggagc ctcaccggta ctggtttatc agtatgccgc atccggagtc       480
     caagccaaca ataaattgtt gtatgatctt tcgccgatgc gcgctgatat tggcgacatg       540
     cgtaagtacg ccgtactcgt gtattcaaaa gacgatgcac ttgagtcgga tgagctagtg       600
     cttcatgtcg acattgagca ccaacgtatt cccacatctg gagtgctccc agtttga          657
//