ID   FJ896158; SV 1; linear; genomic RNA; STD; VRL; 657 BP.
XX
AC   FJ896158;
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DT   01-JAN-2010 (Rel. 103, Created)
DT   15-JUL-2010 (Rel. 105, Last updated, Version 2)
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DE   Cucumber mosaic virus isolate Niger coat protein gene, complete cds.
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KW   .
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OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
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RN   [1]
RP   1-657
RX   DOI; 10.1111/j.1365-3059.2010.02285.x.
RX   AGRICOLA; IND44393280.
RA   Salem N.M., Ehlers J.D., Roberts P.A., Ng J.C.K.;
RT   "Biological and molecular diagnosis of seedborne viruses in cowpea
RT   germplasm of geographically diverse sub-Saharan origins";
RL   Plant Pathol. 59(4):773-784(2010).
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RN   [2]
RP   1-657
RA   Salem N.M., Ng J.C.K.;
RT   ;
RL   Submitted (05-APR-2009) to the INSDC.
RL   Plant Pathology and Microbiology, University of California Riverside, 900
RL   University Avenue, Riverside, CA 92521, USA
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DR   MD5; 05619b92d76e0683e7c74dbbf001a1fb.
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FH   Key             Location/Qualifiers
FH
FT   source          1..657
FT                   /organism="Cucumber mosaic virus"
FT                   /segment="RNA3"
FT                   /host="cowpea"
FT                   /isolate="Niger"
FT                   /mol_type="genomic RNA"
FT                   /country="Niger"
FT                   /db_xref="taxon:12305"
FT   CDS             1..657
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:D2E417"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:D2E417"
FT                   /protein_id="ADA63482.1"
FT                   /translation="MDKSDSASAGRNRRRRPRRGSRSASSSADVNFRVLSQQLSRLNKT
FT                   LAAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLSLPESVTEFDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISTMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSPMRADIGDMRKYAVLVYSKDDTLESDELVLHVDIEHQRIPTSGVLPV"
XX
SQ   Sequence 657 BP; 151 A; 171 C; 151 G; 184 T; 0 other;
     atggacaaat ctgattcagc cagcgccggt cgtaaccgtc gacgtcgtcc gcgtcgtggt        60
     tcccgctccg cttcctcctc cgcggatgtt aactttagag tcctgtcgca gcaactttcg       120
     cggcttaata agacgttagc agctggtcgt cctactatta accacccaac ctttgtaggg       180
     agtgagcgtt gtaaacctgg atacacgttc acgtctatta ccctaaagcc accaaaaata       240
     gaccgcgggt cttattatgg taaaaggttg tctttacctg aatcagtcac ggaattcgat       300
     aagaaacttg tttcgcgcat tcaaattcga gtcaatcctt tgccgaaatt tgattctacc       360
     gtgtgggtga cagtccgtaa agttcctgcc tcttcggact tgtccgtcgc cgccatttct       420
     actatgtttg cggacggagc ctcaccggta ctggtttatc agtatgctgc atccggagtc       480
     caagccaaca ataaattgtt gtatgatctt tcgccgatgc gcgctgatat tggcgacatg       540
     cgtaagtacg ccgtactcgt gtattcaaaa gacgatacac ttgagtcgga tgagctagtg       600
     cttcatgtcg acattgagca ccaacgtatt cccacatctg gagtgctccc agtttga          657
//