ID FJ882146; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC FJ882146; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A_ZW_Mas5_Mic7-1993, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.015537-0. RX PUBMED; 19692547. RA Harkins G.W., Martin D.P., Duffy S., Monjane A.L., Shepherd D.N., RA Windram O.P., Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., RA Flett B., Ramusi M., Rybicki E.P., Peterschmitt M., Varsani A.; RT "Dating the origins of the maize-adapted strain of maize streak virus, RT MSV-A"; RL J. Gen. Virol. 90(Pt 12):3066-3074(2009). XX RN [2] RP 1-2687 RA Harkins G.W., Martin D.P., Monjane A.L., Shepherd D.N., Windram O.P., RA Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., Flett B., Ramusi M., RA Rybicki E.P., Peterschmitt M., Varsani A.; RT ; RL Submitted (02-APR-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Private Bag, Cape Town, RL WP 7701, South Africa XX DR MD5; 7c58d6658e8134fe303c16ad5f0e943d. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="maize" FT /isolate="MSV-A_ZW_Mas5_Mic7-1993" FT /mol_type="genomic DNA" FT /country="Zimbabwe" FT /lat_lon="20.36 S 30.62 E" FT /collection_date="1993" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:D2E0V9" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:D2E0V9" FT /protein_id="ACZ04301.1" FT /translation="MDPQNALYYQPRVPTAAPTSGGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNIPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:D2E1B9" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:D2E1B9" FT /protein_id="ACZ04303.1" FT /translation="MSTSKRKRGDDSNWSKRVPKKKPSSAALKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAIDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNESWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1714..2532) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:D2E1C0" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2E1C0" FT /protein_id="ACZ04302.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEIACQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHATSKEEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEPENLLGPEA" XX SQ Sequence 2687 BP; 691 A; 631 C; 689 G; 676 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggcccgagtg atttgatcta 60 aagcctggtc ctgctttgta tgatttatct aaagcagccc aatctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccttgtat 180 tatcagccgc gggtacccac agcagctccg acatccggag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ttgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggtg gacaagctgt ggataggagc aaccctatcc ctaatatacc agcaccacca 420 agtcagggca atcccgggcc atttgttcca ggcacgggat aagcattcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ttggagtaag cgggtgccta agaagaagcc 540 ttcttcagct gcgctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gacactccag catgcaggga ccaccatgat aacggtcccc tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctgac 720 gtacaagatc gccatcgact accacttcgt tgccgacgcg gcagcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaagt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacggtcgg attggttcgg atatccctcc atcgaatgaa agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagtgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacggg ggagttggtg ccatccagag aggagcgttg tacatggtca ttgcccctgg 1140 caatggcctt acttttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaacgcc gtttttatta tatttgatga atgctgaaag cttacattaa 1260 tatgtcgtgc gatggcacga aaaacacaca caatcaatac aggggggtag tcggcgggcg 1320 gctaagggtg gtgctcggcg ggcagaacat cgaaaaatca agatctatct gaatatactg 1380 cctccgtagg aggcagctca gggggagaat accacttctc ccccggcgac ataatgtaaa 1440 tgatgcagtt tgcctcgaaa tactccagct gccctggagt catttccttc atccaatctt 1500 catccgagtt ggcgaggatt attgtaggct tagacttctt ctgcaccttt ttcttcttac 1560 catacttggg gtttacaatg aaatccctct gacagccaac taactgtttc caacaaggac 1620 agaatttaaa cggaatatca tctacgatgt tgtagattgc gtattcgttg tatgaacacc 1680 aatcaacatt attttgccag taattatgaa cccctaggct tctggcccaa gtagattttc 1740 cggttcttgt tgggccgacg atgtagaggc tctgctttct tgatctttca tctgatgact 1800 ggatacagaa tccatccatt ggaggtcaga aattgcatcc tcgagggtat aacaggtagg 1860 ttgaaggagc atgtaagctt cgggactaac ctggaagatg ttaggctgga gccaatcatt 1920 gattgactca ttacatagca aatcaggtga ggagggtgga tgaggattgg tgaactcttc 1980 ctgaatctca ggaaaaagct tatttgcaga gtattcaaaa tactgcaatt ttgtggacca 2040 atcaaaggga agctctttct ggatcatgga gaggtactct tctttggaag tagcgtgtga 2100 aataatgtct cgcattattt catctttaga aggctttttt tccttaactt ctgaatcaga 2160 ttttcctagg aagggggact tcctaggaat gaaagtacct ctctcaaaca tagccagagg 2220 ttccttgaga atgtaatccc tcaccctgtt tactgacttg gcactctgaa tgtttgggtg 2280 aaacccatta atatcaaaga accttgagtc ggatatcctt accggcttct ctgtctgaag 2340 caatgcatgt aaatgcaaac ttccatcttt atgtgcctct cgggcacata gaatatattt 2400 gggaatccaa cgaacaacga gctcccagat catctgacag gcgatttcag gattttctgg 2460 acactttgga taggttagga acgtgttagc gttcctgtgt gagaactgac ggttggatga 2520 ggaggaggcc atagccgacg acggaggatg aggctgaggg atggcagact gggagctcca 2580 aactctatag tatacccgtg cgccttcgaa atccgccgct cccttgtctt atagtggttg 2640 taaatgggcc ggaccgggcc ggcccagcag gaaaagaagg cgcgcac 2687 //