ID FJ882113; SV 1; circular; genomic DNA; STD; VRL; 2687 BP. XX AC FJ882113; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A_ZA_Hec5_O17-1989, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2687 RX DOI; 10.1099/vir.0.015537-0. RX PUBMED; 19692547. RA Harkins G.W., Martin D.P., Duffy S., Monjane A.L., Shepherd D.N., RA Windram O.P., Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., RA Flett B., Ramusi M., Rybicki E.P., Peterschmitt M., Varsani A.; RT "Dating the origins of the maize-adapted strain of maize streak virus, RT MSV-A"; RL J. Gen. Virol. 90(Pt 12):3066-3074(2009). XX RN [2] RP 1-2687 RA Harkins G.W., Martin D.P., Monjane A.L., Shepherd D.N., Windram O.P., RA Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., Flett B., Ramusi M., RA Rybicki E.P., Peterschmitt M., Varsani A.; RT ; RL Submitted (02-APR-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Private Bag, Cape Town, RL WP 7701, South Africa XX DR MD5; 0259e45fbd9836de4cca1be40441e989. XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Maize streak virus" FT /host="maize" FT /isolate="MSV-A_ZA_Hec5_O17-1989" FT /mol_type="genomic DNA" FT /country="South Africa" FT /lat_lon="26.4 S 27.57 E" FT /collection_date="1989" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:D2E122" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:D2E122" FT /protein_id="ACZ04205.1" FT /translation="MDPQNALYYQPRVPTAAPASAGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRGNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:B6CZ76" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:B6CZ76" FT /protein_id="ACZ04206.1" FT /translation="MSTSKRKRGDDANWSKRVTKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAIDYHFVADAAACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:D2E124" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2E124" FT /protein_id="ACZ04207.1" FT /translation="MASSSSNRQFSHRNVNTFLTYPKCPENPEIACQMIWELVVRWIPK FT YIVCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAMFERGTFIPRKSPFLGKSDSEVKEKKPSKDEIMRDIISHSTSKEEYLSMIQKEFPY FT DWATKLQYFEYSANKLFPEIQEEFTNPHPQSTPDLLCSESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSVSSHQMKDQESRASTSSAQQEQENLLGPEA" XX SQ Sequence 2687 BP; 682 A; 650 C; 687 G; 668 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggcccgagcg atttgatgta 60 aagcttggtc ctgctttgta tgatttatct aaagcagccc attctaaaga aaccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccttgtac 180 tatcagccgc gggtacccac agcagctccg gcatccgcag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ctgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggag gacaagctgt ggataggggc aaccctatcc ctaatctacc agcaccacca 420 agtcagggca atcccgggcc atttgttcca ggcacgggat aagcattcag ccatgtccac 480 gtccaagagg aagcgtggag atgatgcgaa ctggagtaag cgggtgacta agaagaagcc 540 ttcttcagct gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gacactccag catgctggga ccaccatgat aacggtccca tccggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctcac 720 gtacaagatc gccatcgact accacttcgt tgccgacgcg gcagcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaggt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacgggcgg attggttcgg acattcctcc ctcgaatgca agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagcgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg ccatccagag aggagctttg tacatggtca ttgcccccgg 1140 caatggcctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaactc ccgttttatt atatttcatg aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg caaaaacaca cgcaatcaat acaggggggt agtaggcggg 1320 cggctaaggg tggtgctcgg cgggcaaaac atcgaaaaat caagatctat ctgaatgtac 1380 tgcctccgta ggaggcagct cagggggaga ataccacttc tcccccggcg acataatgta 1440 aatgacgcaa tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccaatc 1500 ttcatccgag ttggcgagga ttattgtagg cttagacctc ttctgcacct tcttcttctt 1560 accatacttg gggtttacaa tgaaatccct ctgacagcca actaactgtt tccaacaagg 1620 acagaattta aacgggatat catctacgat gttgtagatt gcgtcttcgt tgtatgaaga 1680 ccaatcaaca ttattttgcc agtaattatg aacccctagg cttctggccc aagtagattt 1740 tcctgttctt gttgggccga cgatgtagag gctctgcttt cttgatcctt catctgatga 1800 ctggatacag aatccatcca ttggaggtca gaaattgcat cctcgagggt ataacaggta 1860 ggttgaagga gcatgtacgc ttcgggacta acctggaaga tgttaggctg gagccaatca 1920 ttgattgact cactacaaag taaatcaggt gtggattgcg gatgaggatt ggtgaactct 1980 tcctgaatct caggaaaaag cttatttgca gagtattcaa aatactgcaa ttttgtggcc 2040 caatcatagg gaaactcttt ctggatcatg gagaggtact cttctttgga agtagagtgt 2100 gaaataatgt ctcgcattat ttcatctttg gaaggctttt tttccttaac ttctgaatca 2160 gattttccta ggaaggggga cttcctagga atgaaagtac ctctctcaaa catagccaga 2220 ggttccttga gaatgtaatc cctcaccctg tttactgact tggcactctg aatgtttggg 2280 tgaaacccat taatatcaaa gaaccttgag tccgatattc ttaccggctt ctctgtttga 2340 agcaatgcat gtaaatgcaa acttccatct ttgtgtgcct ctcgggcaca gacaatatac 2400 ttgggtatcc aacgaacaac gagctcccag atcatctgac aggcgatttc aggattttct 2460 ggacactttg ggtaggttaa gaacgtgttc acgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatccga cgacggagga tgaggctgag ggatggcaga tggggagctc 2580 tcaactctat accaaccggt gcgccttcga aatccgccgc cccccctctt atagtggttg 2640 tgaatgggcc ggaccgggcc ggcccagcag gaaaagaagg cgcgcac 2687 //