ID FJ882089; SV 1; circular; genomic DNA; STD; VRL; 2689 BP. XX AC FJ882089; XX DT 06-DEC-2009 (Rel. 103, Created) DT 06-DEC-2009 (Rel. 103, Last updated, Version 1) XX DE Maize streak virus isolate MSV-A_BJ_Ben_Mic20-1999, complete genome. XX KW . XX OS Maize streak virus OC Viruses; Geminiviridae; Mastrevirus. XX RN [1] RP 1-2689 RX DOI; 10.1099/vir.0.015537-0. RX PUBMED; 19692547. RA Harkins G.W., Martin D.P., Duffy S., Monjane A.L., Shepherd D.N., RA Windram O.P., Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., RA Flett B., Ramusi M., Rybicki E.P., Peterschmitt M., Varsani A.; RT "Dating the origins of the maize-adapted strain of maize streak virus, RT MSV-A"; RL J. Gen. Virol. 90(Pt 12):3066-3074(2009). XX RN [2] RP 1-2689 RA Harkins G.W., Martin D.P., Monjane A.L., Shepherd D.N., Windram O.P., RA Owor B.E., Donaldson L., van Antwerpen T., Sayed R.A., Flett B., Ramusi M., RA Rybicki E.P., Peterschmitt M., Varsani A.; RT ; RL Submitted (02-APR-2009) to the INSDC. RL Electron Microscope Unit, University of Cape Town, Private Bag, Cape Town, RL WP 7701, South Africa XX DR MD5; a4b4e571aaa0e7f622bb743c99724671. DR EuropePMC; PMC2885043; 19692547. XX FH Key Location/Qualifiers FH FT source 1..2689 FT /organism="Maize streak virus" FT /host="maize" FT /isolate="MSV-A_BJ_Ben_Mic20-1999" FT /mol_type="genomic DNA" FT /country="Benin" FT /lat_lon="11.78 N 2.73 E" FT /collection_date="1999" FT /db_xref="taxon:10821" FT CDS 157..462 FT /codon_start=1 FT /product="movement protein" FT /db_xref="GOA:A5JLB8" FT /db_xref="InterPro:IPR002621" FT /db_xref="UniProtKB/TrEMBL:A5JLB8" FT /protein_id="ACZ04136.1" FT /translation="MDPQNALYYQPRVPTAAPASAGVPWSRVGEVAILSFVALICFYLL FT YLWVLRDLILVLKARQGRSTEELIFGGQAVDRSNPIPNLPAPPSQGNPGPFVPGTG" FT CDS 473..1207 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:A5JLV0" FT /db_xref="InterPro:IPR000143" FT /db_xref="InterPro:IPR000263" FT /db_xref="UniProtKB/TrEMBL:A5JLV0" FT /protein_id="ACZ04137.1" FT /translation="MSTSKRKRGDDSNWSKRVTKKKPSSAGLKRAGSKADRPSLQIQTL FT QHAGTTMITVPSGGVCDLINTYARGSDEGNRHTSETLTYKIAIDYHFVADASACRYSNT FT GTGVMWLVYDTTPGGQAPTPQTIFAYPDTLKAWPATWKVSRELCHRFVVKRRWLFNMET FT DGRIGSDIPPSNASWKPCKRNIYFHKFTSGLGVRTQWKNVTDGGVGAIQRGALYMVIAP FT GNGLTFTAHGQTRLYFKSVGNQ" FT CDS complement(1716..2534) FT /codon_start=1 FT /product="RepA" FT /db_xref="GOA:D2E0V5" FT /db_xref="InterPro:IPR001146" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:D2E0V5" FT /protein_id="ACZ04138.1" FT /translation="MASSSSNRQFSHRNANTFLTYPKCPENPEISCQMIWELVVRWIPK FT YILCAREAHKDGSLHLHALLQTEKPVRISDSRFFDINGFHPNIQSAKSVNRVRDYILKE FT PLAVFERGTFIPRKSPFLGKSDSEVKEKKPSKEEIMRDIISHATSKEEYLSMIQKELPF FT DWSTKLQYFEYSANKLFPEIQEEFTNPHPPSSPDLLCNESINDWLQPNIFQVSPEAYML FT LQPTCYTLEDAISDLQWMDSLSSHQMKDQESRASTSSGQQEPENLLGPEA" XX SQ Sequence 2689 BP; 689 A; 636 C; 687 G; 677 T; 0 other; taatattacc gcgccttctt ttcctgcgag ggcccggtag ggcccgagcg atttgatgta 60 aagcctggtc ctgctttgta tgatttatct aaagcagccc attctaaaga atccggtccc 120 gggcactata aattgcctaa caagtgcgat tcattcatgg atccacagaa cgccctgtat 180 tatcagccgc gggtacccac agcagctccg gcatccgcag gagtgccgtg gagtcgcgta 240 ggcgaggtag ctattttgag ctttgttgca ctgatttgct tttacctgct ttacctttgg 300 gtgctgagag accttatctt agttctgaag gctcgacaag gcagatccac ggaggagctg 360 atatttggag gacaagctgt ggataggagc aaccctatcc ctaatctacc agcaccacca 420 agtcagggca atcccgggcc atttgttcca ggcacgggat aagcattcag ccatgtccac 480 gtccaagagg aagcggggag atgattcgaa ttggagtaag cgggtgacta agaagaagcc 540 ctcgtcagct gggctgaaga gggctggaag caaggccgat aggccatccc tccaaatcca 600 gacactccag catgctggga ccaccatgat aactgtccca tctggaggag tatgtgacct 660 catcaacacc tatgcccgag gatctgacga gggcaaccgc cacaccagcg agactctcac 720 gtacaagatc gccatcgact accacttcgt tgccgacgct tcagcctgcc gctactccaa 780 caccggaacc ggtgtaatgt ggctggtgta tgacaccact cccggcggac aagctccgac 840 cccgcaaact atatttgcct accctgacac gctaaaagcg tggccggcca catggaaggt 900 gagccgggag ctgtgtcatc gcttcgtggt gaaacggcga tggttgttca acatggagac 960 cgacgggcgg attggttcgg acattcctcc ttcgaatgca agttggaagc cttgcaagcg 1020 caacatctac ttccacaagt tcacgagcgg gttgggagtg agaacgcagt ggaagaatgt 1080 aacggacgga ggagttggtg ccatccagag aggagcgttg tacatggtca ttgccccagg 1140 caatggtctt acatttactg cccatgggca gacccgtctg tactttaaga gtgttggcaa 1200 ccagtaatga ataaaaactc ccgttttatt atatctgatg aatgctgaaa gcttacatta 1260 atatgtcgtg cgatggcacg aaaaaacaca cgcaatcaat acaggggggt agtaggcggg 1320 cggctaaggg tggtgctcgg cgggcagaac atcgaaaaat caagatctat ctgaatgtac 1380 tgcctccgta ggaggcagct cagggggaga ataccacttc tcccccggcg acataatgta 1440 aatgacgcag tttgcctcga aatactccag ctgccctgga gtcatttcct tcatccaatc 1500 ttcatccgag ttggcgagga ttattgtagg cttagacttc ttctgcacct tcttcttctt 1560 accatatttg gggtttacaa tgaaatccct ctgacagcca actaactgtt tccaacaagg 1620 acagaattta aacggaatat catctacgat gttgtagatt gcctcttcgt tgtatgaaga 1680 ccaatcaaca ttattttgcc agtaattatg aacccctagg cttctggccc aagtagattt 1740 tccggttctt gttggcccga cgatgtagag gctctgcttt cttgatcttt catctgatga 1800 ctggatagag aatccatcca ttggaggtca gaaattgcat cctcgagggt ataacaggta 1860 ggttgaagga gcatgtatgc ttcgggacta acctggaaga tgttaggctg gagccaatca 1920 ttgattgact cattacaaag taaatcaggt gaggagggtg gatgaggatt ggtgaattct 1980 tcctgaatct caggaaaaag tttatttgca gagtattcaa aatactgcaa ttttgtggac 2040 caatcaaagg gaagctcttt ctggatcatg gagaggtact cttctttgga agtagcgtgt 2100 gaaataatgt ctcgcattat ttcctcttta gaaggctttt tttcctttac ctctgaatca 2160 gattttccta ggaaggggga cttcctagga atgaaagtac ctctctcaaa aacagccaga 2220 ggttccttga gaatgtaatc cctcaccctg ttaactgact tggcactctg aatatttggg 2280 tgaaacccat ttatatcaaa gaaccttgag tcagatatcc ttaccggctt ctctgtctga 2340 agcaatgcat gtaaatgcaa acttccatct ttatgtgcct ctcgggcaca tagaatatat 2400 ttgggaatcc aacgaacaac gagctcccag atcatctggc aggagatttc aggattttct 2460 ggacactttg gataggttag gaacgtgtta gcgttcctgt gtgagaactg acggttggat 2520 gaggaggagg ccatatccga cgacggaggc tgaggctgag ggatggcaga ctgggagctc 2580 caaactctat agtatacctg tgcgccttcg aaatccgccg ctcccttgtc ttatagtagt 2640 tgtaaacggg ccggtccggg ccggcccagc aggaaaagaa ggcgcgcac 2689 //