ID   FJ882070; SV 1; linear; genomic RNA; STD; VRL; 803 BP.
XX
AC   FJ882070;
XX
DT   13-MAY-2009 (Rel. 100, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus isolate Texas 2 nucleocapsid protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-803
RA   Crosslin J.M., Mallik I., Gudmestad N.C.;
RT   "First report of tomato spotted wilt virus causing potato tuber necrosis in
RT   Texas";
RL   Plant Dis. 93:845(2009).
XX
RN   [2]
RP   1-803
RA   Crosslin J.M., Mallik I., Gudmestad N.C.;
RT   ;
RL   Submitted (01-APR-2009) to the INSDC.
RL   USDA-ARS, 24106 North Bunn Road, Prosser, WA 99350, USA
XX
DR   MD5; 8f5998d016460af452ad9dbf52a5f3a6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..803
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /segment="S"
FT                   /host="Solanum tuberosum"
FT                   /isolate="Texas 2"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="infected tuber tissue from a potato
FT                   stoarge facility"
FT                   /collection_date="06-Oct-2008"
FT                   /PCR_primers="fwd_seq:
FT                   ccctcgaggctttcaagcaagttctgcg,rev_seq:
FT                   gctctagagccatcatgtctaaggttaagctcac"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(13..789)
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:C4P6P4"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:C4P6P4"
FT                   /protein_id="ACQ85225.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGRITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLVQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA"
XX
SQ   Sequence 803 BP; 220 A; 185 C; 140 G; 258 T; 0 other;
     ccctcgaggc tttcaagcaa gttctgcgag ttttgcctgt tttttaaccc caaacatttc        60
     atagaacttg ttaagagttt cactgtaatg ttccatagca atacttcctt tagcattagg       120
     attgctggag ctgagtatag cagcatactc ttttcccttc ttcacctgat cttcattcat       180
     ttcaaatgct ttgcttttca gcacagtgca aacttttcct aaggcttctc tggtgtcata       240
     cttctttggg tcaatcccga ggtccttgta ttttgcatcc tgatatatag ccaagacaac       300
     actgatcatc tcaaagctat caactgaagc aataagaggt aagctacctc ccagcattat       360
     ggcaagcctc acagactttg catcatcaag aggtaatcca taggcttgaa ccaaagggtg       420
     ggaagcaatc ttagatttaa tagtattgag attctcagaa ttcccagttt cctcaacaag       480
     cctgaccctg atcaagctat caagccttct gaaggtcatg tcagtggctc caatcctgtc       540
     tgaagttttc tttatggtaa ttctaccaaa agtaaaatca ctttgcttaa taaccttcat       600
     tatgctctga cgattcttca ggaatgtcag acatgaaata acgctcatct ttttgatctg       660
     gtcaaggttt tccagacaaa aagtcttgaa gttgaatgct accagattct gatcttcctc       720
     aaactcaagg tctttgcctt gtgtcaacaa agcaacaatg ctttccttag tgagcttaac       780
     cttagacatg atggctctag agc                                               803
//