ID   FJ882069; SV 1; linear; genomic RNA; STD; VRL; 777 BP.
XX
AC   FJ882069;
XX
DT   13-MAY-2009 (Rel. 100, Created)
DT   05-AUG-2023 (Rel. 144, Last updated, Version 3)
XX
DE   Tomato spotted wilt virus isolate Texas 1 nucleocapsid protein gene,
DE   complete cds.
XX
KW   .
XX
OS   Orthotospovirus tomatomaculae
OC   Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina;
OC   Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus.
XX
RN   [1]
RP   1-777
RA   Crosslin J.M., Mallik I., Gudmestad N.C.;
RT   "First report of tomato spotted wilt virus causing potato tuber necrosis in
RT   Texas";
RL   Plant Dis. 93:845(2009).
XX
RN   [2]
RP   1-777
RA   Crosslin J.M., Mallik I., Gudmestad N.C.;
RT   ;
RL   Submitted (01-APR-2009) to the INSDC.
RL   USDA-ARS, 24106 North Bunn Road, Prosser, WA 99350, USA
XX
DR   MD5; f79731a28f38d2b28796a3bc52796ee6.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..777
FT                   /organism="Orthotospovirus tomatomaculae"
FT                   /segment="S"
FT                   /host="Solanum tuberosum"
FT                   /isolate="Texas 1"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /isolation_source="infected tuber tissue from a potato
FT                   stoarge facility"
FT                   /collection_date="06-Oct-2008"
FT                   /PCR_primers="fwd_seq: ttaagcaagttctgtgagtt,
FT                   rev_seq:atgtctaaggttaagctcac"
FT                   /db_xref="taxon:3052585"
FT   CDS             complement(1..777)
FT                   /codon_start=1
FT                   /product="nucleocapsid protein"
FT                   /db_xref="GOA:C4P6P3"
FT                   /db_xref="InterPro:IPR002517"
FT                   /db_xref="UniProtKB/TrEMBL:C4P6P3"
FT                   /protein_id="ACQ85224.1"
FT                   /translation="MSKVKLTKESIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI
FT                   KKMSVISCLTFLKNRQSIMKVIKQSDFTFGRITIKKTSDRIGATDMTFRRLDSLIRVRL
FT                   VEETGNSENLNTIKSKIASHPLVQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS
FT                   IVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS
FT                   NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLTELA"
XX
SQ   Sequence 777 BP; 216 A; 176 C; 132 G; 253 T; 0 other;
     ttaagcaagt tctgtgagtt ttgcctgttt tttaacccca aacatttcat agaacttgtt        60
     aagagtttca ctgtaatgtt ccatagcaat acttccttta gcattaggat tgctggagct       120
     aagtatagca gcatactctt tccccttctt cacctgatct tcattcattt caaatgcttt       180
     gcttttcagc acagtgcaaa cttttcctaa ggcttccctg gtgtcatact tctttgggtc       240
     gatcccgagg tccttgtatt ttgcatcctg atatatagcc aagacaatac tgatcatctc       300
     aaagctatca actgaagcaa taagaggtaa gctacctccc agcattatgg caagcctcac       360
     agactttgca tcatcaagag gtaatccata ggcttgaacc aaagggtggg aagcaatctt       420
     agatttgata gtattaagat tctcagaatt cccagtttcc tcaacaagcc tgaccctgat       480
     caagctatca agccttctga aggtcatgtc agtggctcca atcctgtctg aagttttctt       540
     tatggtaatt ctaccaaaag taaaatcact ttgcttaata accttcatta tgctctgacg       600
     attcttcagg aatgtcagac atgaaataac gctcatcttt ttgatctggt caaggttttc       660
     cagacaaaaa gtcttgaagt tgaatgctac cagattctga tcttcctcaa actcaaggtc       720
     tttgccttgt gtcaacaaag caacaatgct ttccttagtg agcttaacct tagacat          777
//