ID FJ861695; SV 1; linear; viral cRNA; STD; VRL; 2386 BP. XX AC FJ861695; XX DT 09-NOV-2009 (Rel. 102, Created) DT 09-NOV-2009 (Rel. 102, Last updated, Version 1) XX DE Quaranfil virus isolate EG T 377 polymerase PB1 (PB1) gene, complete cds. XX KW . XX OS Quaranfil quaranjavirus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes; OC Articulavirales; Orthomyxoviridae; Quaranjavirus. XX RN [1] RP 1-2386 RX DOI; 10.1128/JVI.00677-09. RX PUBMED; 19726499. RA Presti R.M., Zhao G., Beatty W.L., Mihindukulasuriya K.A., da Rosa A.P., RA Popov V.L., Tesh R.B., Virgin H.W., Wang D.; RT "Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the RT family Orthomyxoviridae"; RL J. Virol. 83(22):11599-11606(2009). XX RN [2] RP 1-2386 RA Presti R.M., Wang D., Virgin H.W.; RT ; RL Submitted (23-MAR-2009) to the INSDC. RL Medicine, Washington University, 660 S. Euclid, St. Louis, MO 63110, USA XX DR MD5; e57a2463b5dc92e0ad27cede0af8ed5c. DR EuropePMC; PMC2772707; 19726499. XX FH Key Location/Qualifiers FH FT source 1..2386 FT /organism="Quaranfil quaranjavirus" FT /host="Argas reflexus" FT /isolate="EG T 377" FT /mol_type="viral cRNA" FT /country="Afghanistan" FT /collection_date="Sep-1968" FT /db_xref="taxon:688436" FT gene 33..2366 FT /gene="PB1" FT CDS 33..2366 FT /codon_start=1 FT /gene="PB1" FT /product="polymerase PB1" FT /db_xref="GOA:D0QX26" FT /db_xref="InterPro:IPR001407" FT /db_xref="InterPro:IPR007099" FT /db_xref="UniProtKB/Swiss-Prot:D0QX26" FT /protein_id="ACY56282.1" FT /translation="MERLNSFLVSTLIRDGMSREEKEKLVGPYPVGIENTGLGAVSFLY FT KYVNVPPLAVGAPAPKTAESVLRSFEYNRLPDNGKGLRPRQYWMETDGPYPYDVTCANF FT HLSAAQEMHKSFLREHHAVIDKVTEAMYQRLKTTNADILTKGKQTWDPINKRSVPSAAA FT FKEITTVLRTYLKLVGFSVLDFVEAFHRMLMLPEMVYNRRVNAEKTVRKRKGGVITLEK FT KAVVVLETVHLTRNEDVRETVMGWATAFCSYLKSKERGKLKRRAIASANPILRMFLWIV FT EELHLELGKQEEMVSSTISIGGEEKRAKIIATPDGLSLNEFNIQATEDATKWNECLAPE FT NFCLMHEIWWSHSIREEMGLPKPPESAEIMRQIFQQAFYLLSHKRIYLGKGHLIHNQTR FT AALLQWKEDHEKYMNEKTLEWFRKIKEHLDSEGYVKAPFGMLMGMLNAGSTTLALPATK FT WRLQPGMDCKTVRSSDDSMTVFSGKTRQLLMENINRFYDNLKLLGINISQKKTRFFQLK FT FGEYTSAYQDGDFTAQYGVGTAALRPEGSNPPDDFHSVASQTATSLRSGTVNFVGAQFR FT LGIGVDNVRRLYKIDRTPGKRQGVPDSALVLSDGGPSPWNFSNCHLPELALKWITHEQN FT PQATRYLERVMNPNNPFTADAAEITSFSRELNTLVETSLELPRNLFHTLKRFNATQKSL FT LRKGDNDFMKSCNLAMQLFEEVIPASLLQVPSGPQPMSQVMADVLRAQASALRSVGVHF FT TEEEMEEIRGALNTLEHDSNIDFE" XX SQ Sequence 2386 BP; 694 A; 533 C; 618 G; 541 T; 0 other; gcaatcacaa tctctttgct tccttcttaa taatggagcg cctgaacagc tttctagtgt 60 ctaccctcat aagagatggt atgagcaggg aggaaaaaga gaaattagta ggaccatatc 120 ctgttgggat tgaaaacact ggtctggggg cagtttcctt cttgtataag tatgtgaatg 180 tcccccctct tgcagtaggt gccccagccc ccaagactgc tgagtcggtg ttgcgctcct 240 ttgagtacaa tcgcctccct gacaatggga aagggttgag gccgagacaa tactggatgg 300 aaactgatgg cccctaccca tatgatgtga cttgtgcaaa cttccacctt tctgctgcac 360 aagaaatgca caagagtttc ctgagggaac atcacgctgt catcgacaaa gttacagagg 420 ccatgtatca gcggctcaaa actaccaatg cggacattct aactaagggc aaacaaactt 480 gggaccccat caacaaaaga agtgttccca gcgccgccgc tttcaaagag ataaccactg 540 tgcttcgaac atacctcaag cttgtagggt tttcagtcct tgactttgtg gaggctttcc 600 acaggatgtt gatgctacct gagatggtct ataataggcg ggtaaatgct gagaagacag 660 taagaaagcg gaaggggggt gtgataacac tagaaaagaa agcagtggtg gtactagaga 720 ctgtccacct gacaaggaat gaggatgtga gggagacggt gatgggctgg gccaccgcct 780 tttgctctta tttgaaaagc aaggaaaggg gcaaactaaa aaggagggcg atcgcatccg 840 caaacccaat cctgaggatg ttcttgtgga ttgtcgagga gctccatctg gagctgggta 900 aacaagaaga gatggtcagt tctaccatca gcattggagg tgaagaaaag agagctaaga 960 tcatcgccac accggatggg ctatctctga acgagttcaa tatccaggcg accgaagatg 1020 cgactaagtg gaatgagtgc ctggcaccag agaatttctg cctgatgcat gagatatggt 1080 ggtcccattc tataagggag gaaatggggc ttcccaagcc tcctgagagc gctgaaatta 1140 tgaggcaaat ttttcaacaa gccttctact tgttgtccca caaaaggatc tacttaggga 1200 agggtcacct gatacacaat cagacaagag cagcactgct gcaatggaag gaagaccatg 1260 agaaatacat gaatgagaaa acgttggagt ggttccggaa aattaaggaa catttggaca 1320 gtgagggcta cgtcaaagcg cctttcggaa tgcttatggg catgctaaat gcggggagta 1380 ccactctggc cttgccggcc accaagtgga ggctgcaacc tgggatggat tgcaagacag 1440 tcaggagcag tgatgattcc atgactgtct tttcagggaa gaccaggcag ctgctgatgg 1500 agaatataaa ccgattttac gacaatctaa agctactagg gataaacata tcgcagaaaa 1560 agacccggtt cttccaatta aagtttggag agtatacatc agcataccaa gacggtgact 1620 tcactgccca atatggggtt ggaacggctg ccctaaggcc agaaggaagc aaccctccag 1680 atgacttcca ttcagtagcg tctcagacgg caacatcctt aaggtcaggg actgtcaatt 1740 tcgtgggagc acagtttagg ctgggcattg gagttgacaa tgtaaggagg ctctataaaa 1800 tagaccgtac accagggaag agacaagggg tccctgattc agcccttgtt ctgtcagatg 1860 gtggccccag tccctggaat ttctcaaatt gtcaccttcc ggaactggca ctaaaatgga 1920 tcacgcacga gcagaatcca caagccactc ggtacttgga gagagtcatg aaccccaata 1980 acccatttac cgctgatgcc gcagagatta ccagcttttc tcgtgaactg aacaccctgg 2040 ttgagacctc cctggaattg ccccgaaatc tcttccacac cctaaaaagg ttcaatgcaa 2100 ctcagaaatc actgttgaga aaaggagaca atgacttcat gaagtcttgc aatttggcga 2160 tgcagttgtt tgaagaggta atacccgcca gtctccttca agtgccatca ggtccgcagc 2220 ccatgagcca agtgatggca gatgtactac gtgctcaggc cagtgccttg cgaagtgtag 2280 gggtccactt tactgaggag gaaatggaag aaataagagg cgccctcaat acactagagc 2340 atgactccaa cattgacttt gaatgaaaaa gagatttgtg attgct 2386 //