ID   FJ861694; SV 1; linear; viral cRNA; STD; VRL; 1616 BP.
XX
AC   FJ861694;
XX
DT   09-NOV-2009 (Rel. 102, Created)
DT   09-NOV-2009 (Rel. 102, Last updated, Version 1)
XX
DE   Quaranfil virus isolate EG T 377 hemagglutinin (HA) gene, complete cds.
XX
KW   .
XX
OS   Quaranfil quaranjavirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Quaranjavirus.
XX
RN   [1]
RP   1-1616
RX   DOI; 10.1128/JVI.00677-09.
RX   PUBMED; 19726499.
RA   Presti R.M., Zhao G., Beatty W.L., Mihindukulasuriya K.A., da Rosa A.P.,
RA   Popov V.L., Tesh R.B., Virgin H.W., Wang D.;
RT   "Quaranfil, Johnston Atoll, and Lake Chad viruses are novel members of the
RT   family Orthomyxoviridae";
RL   J. Virol. 83(22):11599-11606(2009).
XX
RN   [2]
RP   1-1616
RA   Presti R.M., Wang D., Virgin H.W.;
RT   ;
RL   Submitted (23-MAR-2009) to the INSDC.
RL   Medicine, Washington University, 660 S. Euclid, St. Louis, MO 63110, USA
XX
DR   MD5; 3bc8e337429618cbeacc57cba882a187.
DR   EuropePMC; PMC2772707; 19726499.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1616
FT                   /organism="Quaranfil quaranjavirus"
FT                   /host="Argas reflexus"
FT                   /isolate="EG T 377"
FT                   /mol_type="viral cRNA"
FT                   /country="Afghanistan"
FT                   /collection_date="Sep-1968"
FT                   /db_xref="taxon:688436"
FT   gene            28..1563
FT                   /gene="HA"
FT   CDS             28..1563
FT                   /codon_start=1
FT                   /gene="HA"
FT                   /product="hemagglutinin"
FT                   /note="glycoprotein"
FT                   /db_xref="GOA:D0QX25"
FT                   /db_xref="InterPro:IPR004955"
FT                   /db_xref="UniProtKB/Swiss-Prot:D0QX25"
FT                   /protein_id="ACY56281.1"
FT                   /translation="MFMVALSLLLLRLSTASPCTSEACSGPYRISKYKMPTIDVSNHKT
FT                   HVTVWKGPKEVTGILGYRSRYTAYCYEGGVLDGNTGCTKWHVMFPPSAAELQKWAIDGK
FT                   CYYGVECNKGGDCWGSWADRCHDDRVDLNSAQEKEYNGNNDEWRMFAHHTCISTWRCGF
FT                   SKSSYPIHFTNVKKGRGDGDITYTLATYDQHGSILSLDKPSVKIDQETTLSFELPRSLV
FT                   SRSSTEIDCFFGNDQTPVCQLNEHFEDLEGQFVTFNGDYTATYGNYLLALNDKKAINGS
FT                   VGAKKFGNKAWVEKQLGKAASLEDVRNILSIQMWSHQESGYNLVQLYKVVGEMMNTLTT
FT                   VINSVGKLDDELIGRLIGVEGKSKWFNSELFHMCPCFQLGSFGDSNCASGYIFSEGRVK
FT                   VDKDGSKCTSFGGSITPLYLFDNVSYKFAVLHTPPAQGVAQDWEGWSWLAAEKQRLIET
FT                   MTFQDSVSGGNNVLSQLYKETLDSFNIWKWFERFSTLAAWGALAISVINMMRK"
XX
SQ   Sequence 1616 BP; 436 A; 358 C; 433 G; 389 T; 0 other;
     gcaatcacat cctctttcac tttcatcatg ttcatggtgg ccctgtcact cctgctcctc        60
     aggctctcca ctgcctcacc atgcaccagt gaagcatgct ctggccctta ccgcatttcc       120
     aagtacaaga tgcccaccat cgatgtgtcc aaccacaaga cccacgtcac agtttggaaa       180
     gggcccaagg aagtcaccgg aatattgggt taccgaagca ggtacaccgc ctactgctac       240
     gaaggaggag tgctggacgg aaacaccggt tgcaccaagt ggcatgtgat gttccctcct       300
     tcagcagcgg agcttcaaaa atgggccatc gatggaaagt gctattatgg agtggagtgt       360
     aacaaggggg gtgattgttg gggcagttgg gctgacaggt gccatgatga tcgagtggat       420
     ctcaactcag cccaggaaaa agagtacaac gggaacaacg acgagtggag gatgtttgcc       480
     catcacacat gtatttccac ttggagatgc ggatttagta agagttctta ccccatccac       540
     ttcacaaatg taaagaaagg gaggggtgat ggggacatca cttacacttt ggccacttac       600
     gaccagcacg ggtctattct ctcccttgat aaaccgtctg taaagataga ccaagaaacc       660
     accctttcct ttgaactccc tcggtcgttg gtgagcaggt cgtctactga gatagactgc       720
     ttctttggga atgaccaaac tcccgtgtgc cagctcaatg agcatttcga ggaccttgaa       780
     ggacaatttg tgacgttcaa tggagactac actgctactt atgggaatta ccttctggcc       840
     ctaaatgaca agaaggctat aaatgggtct gttggtgcta agaagtttgg gaacaaagca       900
     tgggtggaga agcaattggg caaggctgca tcactcgaag atgtaaggaa catactgagc       960
     atccagatgt ggtcgcacca ggagtcgggt tacaatctag tgcagctcta caaagtagtg      1020
     ggcgagatga tgaacacact gacgactgtg ataaacagtg tgggcaagct ggacgatgag      1080
     ttaataggga ggttaattgg agtagaggga aagagcaagt ggtttaatag tgaactgttc      1140
     cacatgtgtc cctgctttca gttgggtagc tttggggact ccaactgcgc ctcaggatac      1200
     attttcagtg aggggagagt caaggttgac aaagacggga gcaaatgcac ttcatttggc      1260
     ggatcaatca caccccttta cctcttcgac aatgtgagtt ataagtttgc ggtgcttcac      1320
     actcccccag ctcaaggcgt ggctcaagac tgggagggat ggagctggct ggccgctgag      1380
     aaacaacgtc tgatagaaac catgactttt caagactcag tgtctggggg gaacaatgta      1440
     ttatctcaat tatacaaaga gactctagac tccttcaaca tttggaaatg gtttgagcgg      1500
     ttttcaactc tggctgcctg gggcgcacta gcaatatcgg tgatcaatat gatgaggaag      1560
     tagaggccct tggtgcacag agtacactgt tgtgaaaaaa gaggattgtg attgct          1616
//