ID FJ859881; SV 1; circular; genomic DNA; STD; VRL; 2704 BP. XX AC FJ859881; XX DT 28-OCT-2009 (Rel. 102, Created) DT 28-OCT-2009 (Rel. 102, Last updated, Version 1) XX DE Squash leaf curl China virus [India:Varanasi:Pumpkin] segment DNA-B, DE complete sequence. XX KW . XX OS Squash leaf curl China virus - [India:Varanasi:Pumpkin] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2704 RX DOI; 10.1007/s11262-009-0396-4. RX PUBMED; 19705268. RA Singh A.K., Mishra K.K., Chatopadhyay B., Chakraborty S.; RT "Biological and molecular characterization of a begomovirus associated with RT yellow mosaic vein mosaic disease of pumpkin from Northern India"; RL Virus Genes 39(3):359-370(2009). XX RN [2] RP 1-2704 RA Singh A.K., Chatopadhyay B., Chakraborty S.; RT ; RL Submitted (24-MAR-2009) to the INSDC. RL School of Life Sciences, Jawaharlal Nehru University, New Delhi, Delhi RL 110067, India XX DR MD5; 6f5a5ff36c8b351d2267035a1aaae52b. XX FH Key Location/Qualifiers FH FT source 1..2704 FT /organism="Squash leaf curl China virus - FT [India:Varanasi:Pumpkin]" FT /segment="DNA-B" FT /host="pumpkin" FT /isolate="Varanasi" FT /mol_type="genomic DNA" FT /country="India" FT /collected_by="Dr Achuit Kumar Singh" FT /db_xref="taxon:679172" FT gene 470..1276 FT /gene="BV1" FT CDS 470..1276 FT /codon_start=1 FT /gene="BV1" FT /product="nuclear shuttle protein" FT /note="nucleoprotein; required for movement of viral DNA FT from nucleus to cytoplasm and vice versa" FT /db_xref="GOA:D0QX23" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:D0QX23" FT /protein_id="ACX33150.1" FT /translation="MAFTTPYSSARRYSSSTNRLSNASKKLKFWKSRKYHGFMRYRNVN FT STGRIPTDLFGDPISRQYTRKEICETQQGSEYVLQNNRYMTSYVTYPAKTRTGTDNRVR FT SYIKLTGLTMSGTFGIRCSDLMTDVDQPTGLYGVVSIVIVRDKSPKIYSTAQPLMPFVD FT LFGSVNSCRGTLKVAERHRERFVVLNQSSILINTPHCTAMKKFSVRNCIPRTYSTWVTF FT KDEEEDSSTGLYSNTLRNAILIYYVWLSDVSSQLDMYSNVMLNYIG" FT gene complement(1330..2175) FT /gene="BC1" FT CDS complement(1330..2175) FT /codon_start=1 FT /gene="BC1" FT /product="movement protein" FT /note="required for viral DNA cell to cell movement" FT /db_xref="GOA:D0QX24" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:D0QX24" FT /protein_id="ACX33151.1" FT /translation="MSVRNDNMGLGVGGYIESDRVEYALTNDAAEVTLTFPFNVEQKIS FT QLRNRCMKIDHVLLEYRSQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY FT YSSTYFSVKDKNPWRVEYRVENTNVVNGVHFCKMLGKLKLSSAKHSTDVEFRAPRIEIQ FT SKEFTVNDIDFWSVGSKPQTRRLVDGSRLMGHSSRSLRVPHLAIGPNESWASRSEIGLG FT SVTSRPYKNLSGLDESAIDPGPSASQVGSITRDGITEIITKTVEQCTKSNVNAPLTKGV FT " XX SQ Sequence 2704 BP; 752 A; 557 C; 517 G; 878 T; 0 other; accgaaaggc cgcgcttttt ttttcctcaa atctggccgt tgatttaaac taatgcgcaa 60 cgcgatggac aacacgtgtc atctgacaca tcctttatta aagtaaagga ttgtacgatt 120 tcataattcg cacatggtgg aacccattgt ctagatatga aatatctagg aaattgccaa 180 agtggtcccc cgatgtaaaa agctgctgtt tatattgcgt ttgaagtgtg gtcccggtat 240 taattcataa tgcattcgtt accgttgctt tatcatatct agtgtatttc gaacggctga 300 gatcaaaata tgaatttaac actcatctca ccgtccgctt tgtctacatg tttgtaattc 360 catcaaacat gttttatatt ccacgttttg tgctaacatt gtactgaatt atatcattat 420 ataattcact ttcgtgcata gtcgttgcta cttctattgt ttgatccaaa tggcttttac 480 tacaccttat tcttctgcaa gacgatattc atcgtcaaca aacagattat ccaacgcaag 540 caagaaattg aaattttgga agtctcgaaa gtaccatgga tttatgcgtt atcggaatgt 600 gaattccaca ggcaggatcc caactgacct gttcggtgat cctatctcca gacaatatac 660 gcgtaaggaa atttgtgaaa ctcaacaggg atctgaatat gttctccaga acaatcgtta 720 tatgacatcg tatgtcactt atcctgctaa aacccgaact ggaacggata acagggttcg 780 ttcatatatc aagcttactg gtcttaccat gtccggaaca ttcggcattc gatgttccga 840 tttgatgacg gatgtcgatc aacccactgg actctatggt gtcgtgtcca ttgttatcgt 900 ccgtgataaa tcaccgaaga tttattcaac tgcacaacca cttatgccat ttgttgattt 960 atttggttcg gttaattcat gtcgtggaac tcttaaggtg gcagaacgcc accgagaaag 1020 gtttgtggtg ctgaatcaat cttccatatt gataaatact cctcattgca ctgcaatgaa 1080 gaaattctca gttcgtaact gcatcccgcg cacctactct acctgggtca ctttcaagga 1140 tgaagaagag gatagttcca ccggactata ctcaaacacg cttcgaaatg caattctcat 1200 atattatgtg tggttaagcg atgtatcttc tcaacttgat atgtacagca atgtaatgtt 1260 aaattacatt ggttagtgta ttcacgatgc tgaaaatatc ttccattaat aaattttgca 1320 ataattttat catacgcctt tagttaatgg ggcgtttaca ttcgatttcg tacattgttc 1380 taccgtttta gttattattt cagttatccc gtccctcgta atgcttccca cctgtgatgc 1440 cgatggacct ggatcaattg cggattcatc taatccgctg aggtttttat acggtctgct 1500 ggtgactgaa cccagcccaa tttccgatct acttgcccac gattcgttcg gaccaatcgc 1560 aagatgtggg acgcgtaatg atctagagct gtgacccatg agtcttgatc catctacgag 1620 ccgtcttgtt tgtggttttg agcccactga ccagaaatct atgtcgttaa cggtgaattc 1680 tttgctctgt atctctattc ttggtgctcg gaattcgacg tcagtcgaat gtttagccga 1740 ggatagtttt aatttaccaa gcatcttaca gaaatgaact ccatttacta cgttcgtgtt 1800 ctccactctg tactcaactc tccaaggatt tttatcctta acggagaagt acgtggatga 1860 gtagtagtgc agattacagt tgcatttaat cggaattgtg aattctgctt gtttcgtgtc 1920 cccctctgtc aatctcatgt cgtgaatttc aataaccaca tgcccaactg cattaattgg 1980 tacttgactg cgatattcaa gcagaacgtg atcaattttc atgcatctgt ttctcaattg 2040 actgatcttc tgttcgacat tgaaggggaa cgtcagagtg acttccgcag cgtcgtttgt 2100 gagagcgtac tctacgcgat ccgattctat gtaccctcca acaccaagac ccatgttatc 2160 atttcttact gacattttgg cagcgcagca gaaatggctc cgcaggtgaa taaactatga 2220 aacggatgtt aaagaatgtt tggaaacgaa caaagtacag tttgaaatga aacacaggac 2280 aactgtgttt ccaatgaaca tctaacactt atttataacc gttcaattat tgtgttactt 2340 gctccaaagg agtaagagaa ttgaaattgt gaccgacgat ctatcatctt tattattttg 2400 aacggctgag atcaaaatat gaattgcttt ttaattggcc cattatcata aagcccaatt 2460 tgtcaaaatt ggaaagtgat atatatttct ttgggctatt cagaaaatag cccaccaaat 2520 agttatacag cattatatca aaataaggac actgtttcaa gattatttat atggaaagtt 2580 agagagaagt tggacattct ctctctagac accgattcgg ggtctctcca aaactatggt 2640 atattggggt atggagtctt atatatactt tagagaacgt catagcggcc tttcgtttaa 2700 tatt 2704 //