ID   FJ859750; SV 1; circular; genomic DNA; STD; VRL; 1062 BP.
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AC   FJ859750;
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DT   31-MAR-2011 (Rel. 108, Created)
DT   25-AUG-2011 (Rel. 109, Last updated, Version 2)
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DE   Banana bunchy top virus isolate HD1 segment DNA-U3, complete sequence.
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KW   .
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OS   Banana bunchy top virus
OC   Viruses; Nanoviridae; Babuvirus.
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RN   [1]
RP   1-1062
RX   DOI; 10.1016/j.meegid.2011.04.015.
RX   PUBMED; 21539936.
RA   Hyder M.Z., Shah S.H., Hameed S., Naqvi S.M.;
RT   "Evidence of recombination in the Banana bunchy top virus genome";
RL   Infect Genet Evol 11(6):1293-1300(2011).
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RN   [2]
RP   1-1062
RA   Shah S.H., Hyder M.Z., Naqvi S.M.S.;
RT   ;
RL   Submitted (24-MAR-2009) to the INSDC.
RL   Department of Biochemistry, PMAS Arid Agriculture University Rawalpindi,
RL   Murree Road, Rawalpinid 46300, Pakistan
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DR   MD5; d958b4291a4bec9ce78b906976b2088f.
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FH   Key             Location/Qualifiers
FH
FT   source          1..1062
FT                   /organism="Banana bunchy top virus"
FT                   /segment="DNA-U3"
FT                   /host="Musa acuminata Colla"
FT                   /isolate="HD1"
FT                   /mol_type="genomic DNA"
FT                   /country="Pakistan:Hyderabad, Sindh"
FT                   /collection_date="Jan-2007"
FT                   /db_xref="taxon:12585"
FT   CDS             144..377
FT                   /codon_start=1
FT                   /product="U3 protein"
FT                   /db_xref="UniProtKB/TrEMBL:C4XV87"
FT                   /protein_id="ADA55476.1"
FT                   /translation="MTEGQGNRSTLFWLAQQDTRIKLLIRRTRGRTEILLHLYKYPSPV
FT                   KDNCSLSSVKVVVLRRKIASGDRRNDLHLERR"
XX
SQ   Sequence 1062 BP; 350 A; 180 C; 243 G; 289 T; 0 other;
     agcacggggg actattatta ccccccgtgc tcgggacggg acatgggctt tttaaatggg        60
     ccttgagagt ttgaacagtt cagtatcttc gttattgggc caacccggcc caataattaa       120
     gagaacgtgt tcaaattcgt ggtatgaccg aaggtcaagg taaccggtca acattattct       180
     ggcttgcgca gcaagataca cgaattaaat tattaattcg taggacacgt ggacggaccg       240
     aaatactcct gcatctctat aaatacccta gtcctgtgaa ggataattgc tctctctctt       300
     ctgtgaaggt ggttgtgctg aggcggaaga tcgccagcgg cgatcgtcgg aacgacctgc       360
     atctagagag gcggtgaagc aaactacgaa gcgtatatcc ggtatttata gacttatagc       420
     gcagctagaa gtatacactg tacagatatt gtattttgta aattacgaag aatttcgtat       480
     ttgatattaa taaaacacct gggtgtgtta atgtttacat taaatagtat cttgtaggta       540
     caaaataaaa tacagtatac ggaacgtata ctgacaaagt aataaatgat aggcgaagca       600
     tgtttaacag gtgtttaggt ataattaaca taattatgag aagtaataat aatacggaaa       660
     atgaataagt atgaggtgaa agaggagata ttagaatatt taaaaaccca attatattat       720
     tttggaacga aatacaacac gctatgaaat acaagacgct atgacaaatg tacgggtatc       780
     tgattgtgta tcttaacgct taagggccgc aggcccgtca agttgaatga acggtccaga       840
     ttaattcctt agcgactaag aaaggaatct taaagtggac cacataaaag acagctgtca       900
     ttgattaaat aaataatata atattcaaaa gacctttgta cccctgataa tgatgacgtg       960
     taggggtgtc ccgttgtaat atagcatagc tatgagaaga gataagcatc tggccgacaa      1020
     ctttagtggt gggccagatg tcccgagtta gtgcgccacg ta                         1062
//