ID FJ858202; SV 1; linear; genomic RNA; STD; VRL; 3514 BP. XX AC FJ858202; XX DT 19-AUG-2009 (Rel. 101, Created) DT 19-AUG-2009 (Rel. 101, Last updated, Version 1) XX DE Parietaria mottle virus strain CR 8 segment RNA1, complete sequence. XX KW . XX OS Parietaria mottle virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RC Publication Status: Available-Online prior to print RP 1-3514 RX DOI; 10.1007/s11262-009-0388-4. RX PUBMED; 19636693. RA Galipienso L., Rubio L., Lopez C., Soler S., Aramburu J.; RT "Complete nucleotide sequence of a Spanish isolate of Parietaria mottle RT virus infecting tomato"; RL Virus Genes 39(2):256-260(2009). XX RN [2] RP 1-3514 RA Galipienso L., Rubio L., Lopez C., Soler S., Aramburu J.; RT ; RL Submitted (24-MAR-2009) to the INSDC. RL Patologia, IRTA, Ctra. Cabrils Km 2, Cabrils, Barcelona 08348, Spain XX DR MD5; a1a25af82024139afe11cee44fcde168. XX CC GenBank Accession Numbers FJ858202-FJ858204 represent the complete CC genome of Parietaria mottle virus CR 8. XX FH Key Location/Qualifiers FH FT source 1..3514 FT /organism="Parietaria mottle virus" FT /segment="RNA1" FT /host="tomato" FT /strain="CR 8" FT /mol_type="genomic RNA" FT /country="Spain" FT /collection_date="01-Jul-2001" FT /db_xref="taxon:64958" FT 5'UTR 1..35 FT CDS 36..3329 FT /codon_start=1 FT /product="p1 protein" FT /note="replicase" FT /db_xref="GOA:C7T303" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:C7T303" FT /protein_id="ACU44508.1" FT /translation="MDQNSVPSSSRSGVPFVDINSLLNSYIEHVRSDETTNVGRFLGEV FT ALREIKSQVDINNGDFQKLNVGFQLTADEKNALKTSFPGLEIAFKDSCQSSHSFAAAHR FT VCETLDVYKKFNTKTEKIIDLGGNYVTHAKHGRSNVHSCCPILDVRDGARHTDRYMSLA FT SAVEKHHKDLPVDFCCKKFEDCNVQAPYAMAIHSISDIPITTVAKHCVRRGVRKLIATV FT MMDPAMMIYDSGHIPFLNVDWEKEDVECDGKTKTLIHFHFVDAPGLSYSHDFSVLSQYM FT ITNQVIVGDGYSYRVERTNDLNGVFIVEMTLSMTDGITMNHMRPLTDISCAWLTRLRKK FT VFVKLAVPVSHEWFTESFEIRWALMDESLVRYVSEAAFRQYSKEKNAETVVQYIATMLS FT SSSNHVVINGITMRSGSPIKNEEYVPLAVTFYAMAAWRYKMIAPGLAAVATKANRNIDE FT YRDKEKAMNSDETLSDVLVDIQKSILPDDDLGFKNFEKLPDMIKSVGLRCIKGKTLKKV FT RDDTTLLQSRSFFKETLREIRAFFGLTLTDSDFNFVEGTPASLKSMVVWRTFVRNLEFP FT SCLDVSECSYNLMNKHLAQKVEVEREEKKRKDFLDARDRALITIAKVLEKPDVPDGLLP FT LLDLCEVKDELVAATNSLSLTPQTIDVATDNSIVNPYAESIKEAIHYFNELEVVNTRNL FT RTLGSYINWKPASTPHTYGSLQGRNETVKVFIPFENRWYPNTKDLQPYERAMTEDGYVS FT LQWTDDGKSFTDRCFASLRRYGAIVVDDSCVFNSGQRLIPALESALKIKPRFSVKIVDG FT VAGCGKTTHLKKISRLDANPDIVLTSNRSSSDELKEALTCPDAMKYRIRTVDSYLMLKS FT WFSASRMLFDECFLTHAGCVYAAATLAQVSEVIALGDTEQVPFISRLPEFRMQHHKLSG FT EIETQTTTYRCPRDATYCLKSMFYKNKSVKSASVVERSIELVPISSPIQIPCENDVLYI FT THTRADKDALLKIPGFKKENIKTTHEAQGDTWDKVVYFRLSKTTNLLHSGKGPELGSCH FT NLVAISRHRKSFRYYTVAPNDLDDQIVRCTSLVKTLSNSDLDSVRRLKT" FT 3'UTR 3330..3514 XX SQ Sequence 3514 BP; 979 A; 678 C; 851 G; 1006 T; 0 other; tattgtgtat cgaataagaa cacaacctcc acacgatgga tcaaaattcc gtaccttctt 60 cttcacgttc tggtgttccg tttgttgaca tcaatagctt attgaatagc tatattgagc 120 acgtcagatc agacgaaacc acgaacgttg gtcgttttct tggagaggta gccttgagag 180 agattaaatc tcaagttgac atcaataacg gtgatttcca gaagttgaat gttggattcc 240 aactgactgc tgatgagaaa aatgccttga agaccagttt cccgggcctg gaaatagcgt 300 tcaaggattc atgccaatca tcacacagtt ttgctgccgc acacagggtg tgcgagactt 360 tggacgtgta taagaagttc aacaccaaga ccgagaagat cattgatctc ggtggaaatt 420 acgtcaccca tgctaaacat gggcgatcta atgtccattc gtgttgtccg atattggatg 480 tgagagacgg ggctcgtcac accgataggt acatgtcatt agcttctgcc gttgaaaaac 540 atcacaaaga tctacctgta gatttttgtt gcaaaaaatt tgaagactgc aatgttcaag 600 ccccgtatgc catggcgata cattccatca gcgatattcc gatcaccact gtcgcgaaac 660 attgtgtgcg acgtggggta cgaaagttga tagccaccgt tatgatggat ccggccatga 720 tgatttatga ctccggtcat atacccttcc tcaatgttga ttgggagaag gaagacgttg 780 agtgtgacgg taagacaaaa acactcattc atttccactt tgtggatgct cctgggttga 840 gttattctca tgatttctcg gtgttgtctc agtatatgat tactaatcaa gttatcgttg 900 gtgacgggta ctcttataga gtggaacgaa ccaacgactt gaacggtgtt ttcatagttg 960 aaatgactct cagcatgacc gatgggatca cgatgaacca catgaggcct ttgaccgaca 1020 tctcatgcgc gtggttgact cgactcagga agaaggtttt cgttaaactg gctgtaccgg 1080 tgtctcacga atggttcact gaatcatttg aaattcgttg ggcactgatg gatgaatcat 1140 tggtcaggta cgtttccgaa gctgcgtttc gtcagtattc gaaggagaaa aatgctgaaa 1200 ccgtcgtcca atacattgcg acgatgttgt cctcctcatc taaccatgtc gtcattaatg 1260 ggatcaccat gcgtagtggt agtcccatta agaacgaaga atacgttccg ttagcggtta 1320 cattttacgc tatggcggca tggagatata agatgattgc ccctggtcta gccgctgttg 1380 cgactaaggc taacagaaac atcgatgaat atcgtgacaa agaaaaggcg atgaattccg 1440 atgagactct atccgatgtg cttgttgaca ttcaaaaatc gatcttaccc gatgatgatc 1500 ttgggtttaa gaattttgaa aagcttccgg acatgatcaa atctgttggt cttaggtgta 1560 tcaaaggcaa aacgttgaaa aaggtcaggg atgacaccac tcttttacag tctcgtagtt 1620 ttttcaaaga aacgttacgt gagatccgag cgttctttgg attgacattg actgattccg 1680 attttaattt cgtggaaggt acgcccgcga gtttaaaatc gatggtggtt tggagaacct 1740 ttgtgagaaa tcttgagttc ccgtcatgcc tcgatgtgtc cgagtgttct tataatctta 1800 tgaataagca cttggcgcaa aaggtcgagg ttgaacgaga ggagaagaag aggaaagatt 1860 tcttggatgc cagggaccga gctttgataa cgattgctaa agttctggaa aaacctgatg 1920 ttcccgatgg tctgttaccg ctgttggatt tatgcgaggt gaaagatgag ttggttgctg 1980 caactaattc actctcattg actcctcaga ctatcgatgt tgccactgat aattctattg 2040 ttaatcctta tgccgagagc attaaagaag cgattcacta ctttaatgag cttgaagtcg 2100 tcaacacgag gaatttgaga actttagggt cgtacataaa ctggaaacca gctagcacac 2160 cccatactta tggttctctt caaggtagaa atgagacagt gaaggtgttc ataccgtttg 2220 aaaacagatg gtatccgaac acgaaagact tacagccgta tgaaagggct atgacggaag 2280 atggttatgt gagtcttcag tggactgatg atggtaagtc ctttaccgat cgttgttttg 2340 cgtcgttgcg tcggtacggt gctattgtgg tcgatgattc atgtgtattc aattcagggc 2400 agaggttgat tcctgcgctt gagagtgcgc tgaagattaa accgaggttt tctgttaaga 2460 tcgttgacgg tgttgcgggt tgtgggaaaa cgacccatct caagaaaatt tcgagattgg 2520 acgcaaatcc tgacatcgtg ttaacgagta acagaagttc atcagatgag ttaaaagagg 2580 cgttgacgtg tcctgatgcg atgaaatacc gcattagaac agtcgacagt tacctgatgt 2640 tgaaatcttg gttttccgcc agcagaatgc tgttcgatga atgcttcttg acgcatgcgg 2700 gttgtgtgta tgcagccgca actttagctc aggtcagtga agtgattgct ctgggtgata 2760 ccgagcaagt gcccttcata tctagattac ctgagttccg catgcagcat cataagttgt 2820 cgggagaaat tgaaactcaa accacaacat atagatgccc tagggatgcc acgtattgtt 2880 tgaaatcaat gttttataaa aacaaaagcg tgaagtcagc gagcgtggtt gaacgttcga 2940 ttgaattggt tccaatcagt agtcccattc agataccgtg tgaaaatgac gttttatata 3000 taacgcacac gagagccgat aaagatgccc ttctgaagat tcccgggttt aagaaggaga 3060 atataaaaac aactcatgag gcccaaggtg atacatggga taaggttgtt tatttccgtc 3120 tttctaagac gacgaatttg ctgcattctg gtaagggacc tgaacttgga tcgtgtcata 3180 atctagtggc aatctcgaga catcggaaat catttagata ttataccgta gccccgaatg 3240 atttagatga tcaaatcgtg agatgcacta gtttggtcaa gacactgtct aacagtgatc 3300 ttgattcggt taggagattg aagacctaac catgtcgtat catgggatac gatacctcct 3360 tttaggagat ggttttccac aatgagagtt gtgatgcccc catagtggga agaacgttcg 3420 ggtggctact taagcgcttc tatacttaag taccgaatgt tattccgtta ttatctagtg 3480 ataataacga tgcctatttc tatgaaatag aagc 3514 //