ID FJ822961; SV 1; linear; genomic RNA; STD; VRL; 4704 BP. XX AC FJ822961; XX DT 13-APR-2009 (Rel. 100, Created) DT 13-JUN-2012 (Rel. 113, Last updated, Version 2) XX DE Calla lily chlorotic spot virus segment M, complete sequence. XX KW . XX OS Calla lily chlorotic spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus; OC Calla lily chlorotic spot orthotospovirus. XX RN [1] RP 1-4704 RX AGRICOLA; IND44682820. RA Chen T.-C., Li J.-T., Lin Y.-P., Yeh Y.-C., Kang Y.-C., Huang L.-H., RA Yeh S.-D.; RT "Genomic characterization of Calla lily chlorotic spot virus and design of RT broad-spectrum primers for detection of tospoviruses"; RL Plant Pathol. 61(1):183-194(2012). XX RN [2] RP 1-4704 RA Chen T.-C., Lin Y.-P., Yeh S.-D.; RT ; RL Submitted (11-MAR-2009) to the INSDC. RL Biotechnology, Asia University, No. 500 Lioufeng Rd., Wufeng, Taichung RL County 41354, Taiwan XX DR MD5; ec7d16e1d883b95d0117d660498f9f35. DR EuropePMC; PMC3371012; 22715400. XX FH Key Location/Qualifiers FH FT source 1..4704 FT /organism="Calla lily chlorotic spot virus" FT /segment="M" FT /host="calla lily" FT /serotype="WSMoV" FT /mol_type="genomic RNA" FT /country="Taiwan" FT /collection_date="May-2001" FT /db_xref="taxon:309542" FT gene 55..984 FT /gene="NSm" FT CDS 55..984 FT /codon_start=1 FT /gene="NSm" FT /product="nonstructural NSm protein" FT /note="movement protein" FT /db_xref="InterPro:IPR000603" FT /db_xref="InterPro:IPR006889" FT /db_xref="UniProtKB/TrEMBL:C1KFW6" FT /protein_id="ACO52397.1" FT /translation="MSRITNVLSSLIPTNSSKNELVPAIKNESDKSIIARQISKRDISQ FT ALDNKARSFNGKQYVSGMDSSVLGSYSTGGDIEATPDDLLSRLVVEQSTHLSNWKNDSL FT VGNGNDKVSFTINIMPTWDSRRRYMHISRLIVWVVPTVPDSQCMVKATLIDQNEPTKDK FT KIIIGKQTSIANPACFIFHLNWSFPKERNTPKQCFQLNLTSDKKYAKGVSFASVMYSWV FT KNFCDTPIASESNTCDVIPINRAKVIKSAALIEACRLMIPKGTSGKQISNQIKRLQTVA FT EKLQLESEMNENEEDLDIEIDFNDKLEL" FT gene complement(1288..4659) FT /gene="glycoprotein" FT CDS complement(1288..4659) FT /codon_start=1 FT /gene="glycoprotein" FT /product="Gn/Gc glycoprotein" FT /note="envelope projection" FT /db_xref="GOA:C1KFW7" FT /db_xref="InterPro:IPR005167" FT /db_xref="InterPro:IPR014414" FT /db_xref="UniProtKB/TrEMBL:C1KFW7" FT /protein_id="ACO52398.1" FT /translation="MKKYYLPIYCLSLLLLFFVSEVFLLSKTERESKISRIKDRYLVDD FT PDDLVEDYVEYKPEQAPKVVKTTKVLSRILRDSSSTEAPKLESFDCSKFDKKQCMIKGL FT SDFNAHYQIDNGNEIVSCISDSPNIFEICQYEKEFKKTKFSKLPVLPVLKLENKRVLEI FT GTKFFFVDKSNNPVNVDPKSGLQSATVSKLSVRLSGDCKINQIMMSSPYQIKVRSEEPI FT GYLVKNIKDSKLGKIKTVSGDSTINLSPTELDGNHFFLCGDRSSLITKVDIPVRNCVSK FT FSEEPKKIFFCTNFSYFKWLFVFLIIFFPVNWLIWETKDSLVIWYDIIGILTYPLLWIM FT NRLWPYFPLRCRICGCFSLLTHKCPEKCVCNQNKSSKTHTSECYLFTRDRAEWNSMSLL FT QQFQFTINTKLSTNFLVFLTKMIIASILLSYLPSSMALSKNICVDKCYFSSDLKSMTTS FT KNGVSNNRFETCDCSIGNVITETIYQEGVPVSRATSVNNCIAGSTACMRGENQAENLFA FT CRYGCSSLTSIKNIPETKFVPQYKGLAFSGNLTSLKIANRLMNGYLDDSSESKILEKES FT SREYKFYETLKVEDIPPENLMPRQSLVFSSEVDGKYRYMIEMDIKAGTGSIYLLNDDST FT HSPMEFMIYVKSVGVEYDVKYKYSTAKIDTTISDYLVTCTGKCSDCINQKPKVGKLDFC FT VMPTSWWGCEEVGCLAINEGAICGHCTNVYDLSSTVNVYQVIQSHVTAEICIKSIDGYN FT CKKHSDRSPIQTDHYQLDMTVDLHNDYMSTDKLFALNKQQKILTGNIADLGDFSSSAFG FT HPQITIDGTPLSVPSELSRNDFSWSCSAIGEKKINIRQCGLYTYSAMYVLSPSKDYSIM FT DEENNKLYMEKDFLVGKLKVVVEMPEEMFKKVPSKPILSETKAVCSGCAQCAMGISCNL FT TYTSDTTFSSRLMMDSCSFKSDQIGTVLGPNEKNIKAYCSNDIESKSLKLIPEDQSELT FT VDIAIDEFTPVDQDTIIHFDDKSAHDENKHHSDTSISTLWDWVKAPFNWVASFFGAFFD FT MVRIVLVIFAICVGIYILSYVYKLSRSYYDDKRKHKMEDSISAIESDLLLSEGTKMVST FT RKRNPPPKNYQFSLDL" XX SQ Sequence 4704 BP; 1507 A; 818 C; 853 G; 1526 T; 0 other; agagcaatcg gtgcaccaat tcaagaatat catctctaaa tcaatcaaga aataatgtct 60 cgcatcacta acgtcctcag ctctctcatc ccaacaaaca gctcaaaaaa tgagttggtt 120 cctgcaatta agaatgagag cgataaatca attatagcaa gacagatttc aaagagggat 180 ataagccagg ctttagacaa caaagccagg tcgtttaatg gtaagcagta tgtctctgga 240 atggattcaa gtgtgttagg ttcatactct actgggggtg acattgaagc cacaccagat 300 gatttactgt ctagattggt tgtagagcag agcactcatc tcagcaactg gaaaaatgat 360 tctttagttg gtaatggaaa tgataaagtg agtttcacaa taaatatcat gccgacatgg 420 gacagcagga ggaggtacat gcacatatct agactcatag tctgggtagt tccaactgtt 480 ccagattctc aatgcatggt caaagcaaca ttgattgatc agaatgaacc aacaaaagac 540 aaaaagataa ttattggaaa acaaacatct attgcgaacc cagcttgttt tatatttcat 600 ctgaactggt cattccctaa agaaaggaac actccaaagc agtgtttcca actgaaccta 660 acaagcgaca aaaagtacgc aaaaggtgtc agttttgctt ctgtgatgta ttcttgggta 720 aagaatttct gtgatacccc tatagcctca gaaagcaata cttgtgatgt tataccaatc 780 aatagagcta aagtgatcaa gtctgcagct ttgatagagg cctgccgact gatgatacct 840 aaaggcacaa gtggaaaaca aatttcaaat cagatcaaaa ggctccaaac tgttgctgag 900 aaacttcagc tggaatcaga aatgaatgag aatgaagaag atttagatat tgagatagat 960 ttcaatgata aactagagtt ataagcagta ttatttgtat gtgtgcttgt tgtttaattg 1020 caaggtgtgt aatatatgta tacgtatata tatatatata tatatatata aaaaatgtat 1080 ctttgtgtgc ctgtgtgaaa ctacaaataa attaaaagcc aaacaaaaat aaaaaacaaa 1140 aaacaaacaa aaagaaaata aggcttaggc caaaatttgg cttttcagct tttttttgtt 1200 tttgttttgt ttgctttctt ttgttttgtt ttttgatttt atcattatgt ttacttgtct 1260 gaatccggtt tatttatagg attatggcta aagatcaaga gagaattgat aattctttgg 1320 aggaggattt ctttttcttg tagagaccat tttggttcct tcactcaaga ggaggtctga 1380 ttctatagca gaaatagaat cttccatctt atgctttctt ttgtcatcat agtaagatct 1440 tgatagtttg taaacgtaac ttaatatgta tatccctaca cagatagcaa aaattactag 1500 aacaattcta accatgtcaa agaaagcacc aaagaatgat gctacccaat taaaaggagc 1560 tttaacccaa tcccacaatg tagaaataga agtatcagaa tggtgcttat tttcatcatg 1620 ggcactttta tcatcaaaat gtataatagt atcttgatct acaggtgtga attcatcaat 1680 tgcaatatct accgttaatt cactttgatc ttctggtatt agtttaagtg atttgctttc 1740 tatatcgttt gagcagtaag cttttatgtt tttctcattg ggaccaagga ctgttcctat 1800 ctggtcagat ttaaaagaac aagaatccat catcaacctt gaagagaatg ttgtgtctga 1860 agtgtatgtc aaattgcagc ttattcccat agcacattgg gcacatccag agcaaacagc 1920 ttttgtttca gacaatatgg gtttggaagg cacttttttg aacatttctt cgggcatttc 1980 aacaaccact ttgagctttc caactaagaa atctttttcc atgtataatt tattgttttc 2040 ttcgtccatt attgaataat cttttgatgg agataaaaca tacattgcac tatatgtgta 2100 caaaccgcat tgccttatat taattttctt ttcaccgatt gcactgcagc tccaagagaa 2160 atcatttcga cttagctcag acggcacaga taatggtgtt ccatcaatag tgatctgagg 2220 gtgaccaaat gcagaagatg aaaaatcacc aaggtcagct atgttacctg ttaagatttt 2280 ctgttgcttg tttaaagcaa acaatttatc agtactcata tagtcattgt gaaggtcgac 2340 agtcatatca agctgataat gatctgtttg aataggagat ctgtcagagt gctttttgca 2400 attatatcca tctatagact tgatacatat ttcagccgta acatggcttt ggatcacttg 2460 ataaacattg actgtgcttg aaagatcata cacgtttgtg cagtgtccgc aaattgctcc 2520 ttcattgatt gccaaacaac ctacttcttc gcaaccccac caggatgtag gcattacaca 2580 gaagtccaat tttcccactt taggtttctg gtttatacaa tcagaacact ttcctgtaca 2640 cgtgacaagg taatctgata tggttgtgtc tatctttgcc gtagaatact tgtacttaac 2700 atcatactcg actccaacac tctttacata tatcatgaat tccatgggtg aatgagtgct 2760 gtcatcattt aaaagatata ttgaccctgt tcctgctttt atgtccattt caatcatata 2820 cctgtatttc ccatcaactt cggaagaaaa aactagtgat tgcctaggca tcaagttttc 2880 aggagggatg tcttcaacct ttaaggtttc atagaacttg tattctctag aggattcttt 2940 ttccaggatt tttgattctg atgaatcatc aaggtagccg ttcattagtc tgtttgctat 3000 tttcaagcta gttagattcc ctgaaaaagc taaccctttg tactgaggaa caaactttgt 3060 ttctggaata ttcttaatag aagtgagaga agaacatcca tatctgcaag caaataagtt 3120 ttcagcttga ttctcccctc tcatacaagc agtagaacct gcaatgcaat tatttaccga 3180 agtagctctg ctaacaggaa caccttcttg ataaatggtt tctgttatta catttccaat 3240 agagcaatca catgtttcaa accggttgtt agatactcca tttttgcttg tagtcattga 3300 ctttaaatca gaactgaaat agcatttgtc aacacaaata ttcttactca atgccatgct 3360 tgaaggaaga tatgataaca agattgaggc aataatcatt ttagttaaga aaaccaaaaa 3420 attggtgctc aattttgtgt tgattgtgaa ttggaattgt tgtagcaaag acatgctgtt 3480 ccattcagct ctatctctag tgaaaagata gcattcagaa gtgtgagttt tagatgattt 3540 gttttgattg catacacatt tttctggaca cttgtgggtg aggagtgaaa aacaaccgca 3600 tattctgcat ctcagtggaa agtagggcca tagtctgttc atgatccaaa gaagtgggta 3660 tgttaaaatc ccgattatat cataccaaat aacaagtgaa tctttggttt cccagataag 3720 ccagttgaca gggaaaaata ttatgagaaa gacaaaaagc catttgaagt atgaaaagtt 3780 cgtacaaaag aatattttct ttggttcttc tgaaaatttg gagacacaat tcctcactgg 3840 gatatccact ttagtgatta aacttgaacg atctccacag aggaaaaagt gatttccatc 3900 tagttcagtt ggagataaat taatagttga atctccagag acagttttaa tctttccaag 3960 cttagaatct ttgatgttct ttactaagta gccaataggc tcttcagatc gcacttttat 4020 ttgataagga gaagacatca ttatctggtt tattttgcaa tccccagaaa gcctaaccga 4080 caattttgaa acagtggctg attgcagacc tgatttcgga tcaacattga cagggttgtt 4140 tgatttatcg acaaagaaga attttgtgcc aatttctagc actcttttgt tctcaagttt 4200 gagaacagga agaacaggta gtttgctaaa tttagttttc ttgaattctt tctcatactg 4260 acagatttca aagatgtttg gagaatcact tatgcaagat acaatttcat ttccattgtc 4320 aatctgatag tgagcattaa aatcactcaa ccctttgatc atgcactgct tcttgtcaaa 4380 tttagaacaa tcaaaagact ccaatttagg tgcttctgta gatgaactat ccctaaggat 4440 tcgagaaagt acttttgtag ttttgacaac tttgggagcc tgttcgggtt tgtactccac 4500 ataatcttca acaagatcat ctggatcatc aacaaggtat ctgtctttga ttctggaaat 4560 ctttgattcg cgttctgtct tcgacaacaa gaaaacttca gagacaaaga atagtaaaag 4620 aagcgataga cagtagatag gaagatagta tttcttcatt tttaaaagga atataatgtt 4680 tggaattgtt gcactgattg ctct 4704 //