ID   FJ816271; SV 1; linear; genomic RNA; STD; VRL; 1885 BP.
XX
AC   FJ816271;
XX
DT   05-APR-2009 (Rel. 100, Created)
DT   19-NOV-2010 (Rel. 106, Last updated, Version 3)
XX
DE   Heterobasidion RNA Virus 3 putative RNA-dependent RNA polymerase gene,
DE   complete cds.
XX
KW   .
XX
OS   Heterobasidion partitivirus 3
OC   Viruses; Riboviria; Partitiviridae; Alphapartitivirus.
XX
RN   [1]
RP   1-1885
RX   PUBMED; 21036340.
RA   Vainio E.J., Korhonen K., Tuomivirta T.T., Hantula J.;
RT   "A novel putative partitivirus of the saprotrophic fungus Heterobasidion
RT   ecrustosum infects pathogenic species of the Heterobasidion annosum
RT   complex";
RL   Fungal Biol 114(11-12):955-965(2010).
XX
RN   [2]
RP   1-1885
RA   Vainio E.J., Tuomivirta T.T., Hantula J.I.;
RT   "Complete sequence of Heterobasidion RNA Virus 3 from H. ecrustosum, strain
RT   1 (HetRV3-ec1)";
RL   Unpublished.
XX
RN   [3]
RP   1-1885
RA   Vainio E.J., Tuomivirta T.T., Hantula J.I.;
RT   ;
RL   Submitted (10-MAR-2009) to the INSDC.
RL   Forest Pathology, Finnish Forest Research Institute, Vantaa Research
RL   Centre, Jokiniemenkuja 1, P.O.B 18, Vantaa FIN-01301, Finland
XX
DR   MD5; ded48bc84f8ebfb12616fb323229dd3d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1885
FT                   /organism="Heterobasidion partitivirus 3"
FT                   /host="Heterobasidion ecrustosum strain 05166"
FT                   /strain="HetRV3-ec1"
FT                   /mol_type="genomic RNA"
FT                   /country="China"
FT                   /isolation_source="Pinus massoniana wood"
FT                   /collection_date="19-Oct-2005"
FT                   /db_xref="taxon:631431"
FT   CDS             70..1827
FT                   /codon_start=1
FT                   /product="putative RNA-dependent RNA polymerase"
FT                   /db_xref="GOA:C1KDH6"
FT                   /db_xref="UniProtKB/TrEMBL:C1KDH6"
FT                   /protein_id="ACO37245.1"
FT                   /translation="MKIFSTLYSSFASFAKWTGLTDPHGFEHNFYFTGYADKKIKVSIN
FT                   PRFQEVYDDYQSYVGKFIDKHLPGHMAQKIKFGYHHPVASLPFMITNLKKGDLPDHPVP
FT                   HDQHYTAARKAAADAFRPPRLVRPVHFADLRYYKWNWHPNVEEPYYSDPKLQQYVEHCY
FT                   ALGLIDDARLSFGNLKDFVFMDTRHYLHLIKNGSITDNNQLWPIMKIHVKPALTEPTET
FT                   KIRVIYGVSKRHILAQAMFFWPLFRYYIEEHTSPLLWGNETFTGGMLKIHNLISVPRLY
FT                   SQTYLTVDWSGFDLRSLFTIQREIFDDWRTYFDFTAYIPTRTYPDSKTDPIRMERLWNW
FT                   QRDACFKMPFVLPDRTTYARLFRSIPSGLFVTQFLDSHYNLIMIYTILSAMGFDITNLM
FT                   ILVQGDDSLIHLKFFLPADQHDAFKAEFERLAKYYFDHIARPEKTHVTNSPNEVEVLGY
FT                   TNNNGYPSRDMTKLVAQLYHPRNVDKTSWKSLLMAKVCGFAYASCYQDSQVIDLLRSIY
FT                   NNLASKGFKPKSGRVMRDIILFGESEFEVPTDHFPTLNDVTKYFRRPYVRTQRDADSYF
FT                   PSWHFNDVF"
XX
SQ   Sequence 1885 BP; 528 A; 553 C; 313 G; 491 T; 0 other;
     agaagaagcc ctacttgaac aaagcactct tctatatctc aaagtcttac aaactctcat        60
     caaatcacga tgaaaatctt ttcaactctg tactcgtcct ttgcctcatt cgcaaaatgg       120
     acaggtctca ccgatcctca tggttttgaa cacaacttct acttcaccgg ctacgccgac       180
     aagaagatca aagtgtccat taaccctagg tttcaagaag tatacgacga ctaccaatcg       240
     tacgtaggca aatttattga caaacatctt cctggccaca tggctcaaaa gatcaaattt       300
     ggctaccatc atcctgtcgc gtccctacca ttcatgataa ccaatctcaa gaaaggtgac       360
     ttgcctgacc atcccgtccc gcatgaccag cattacactg cagctcgcaa agcagcagct       420
     gatgcattcc gaccgccccg tcttgtccgt ccagttcact tcgctgacct gcgatactac       480
     aaatggaatt ggcaccctaa cgtcgaagaa ccttattact cagatcctaa gctacaacaa       540
     tacgtcgaac attgctatgc actcggccta attgatgacg ctcgcctatc ttttggcaat       600
     cttaaggatt tcgtcttcat ggatacccgc cactacctcc atctcatcaa gaacggatca       660
     attacagaca acaaccaact ctggcccata atgaaaatac acgtcaaacc tgctctcact       720
     gaaccgaccg aaactaaaat tcgtgtcata tacggagtta gcaaacgaca cattcttgca       780
     caagcaatgt ttttctggcc tttgttccgt tactacatcg aagaacacac ttcccctctc       840
     ctctggggca atgaaacctt caccggtggt atgcttaaaa tccacaatct catcagcgta       900
     cctcgtctct actctcaaac ttatctcacg gtagactggt ccggattcga cctccgatca       960
     ctcttcacga tacaacgaga aatctttgat gattggcgaa cctacttcga ctttacagcc      1020
     tacatcccta ccaggactta tcctgactcc aagaccgatc ctatccgcat ggaacgtctt      1080
     tggaattggc aacgtgacgc ttgctttaag atgcctttcg tcctccctga ccgaaccact      1140
     tatgctcgcc tgttccgttc aatcccatct ggcttattcg taacgcaatt cctcgactct      1200
     cattacaatc tgattatgat ctacaccatc ctttcagcta tgggtttcga tatcaccaat      1260
     ctcatgatcc tcgtccaagg agatgactct ctcattcatt tgaagttctt ccttcccgcc      1320
     gatcaacatg atgcattcaa agctgagttc gaacgactcg cgaagtacta cttcgaccat      1380
     atcgctcgac cagagaaaac gcacgtcacc aactctccca acgaagttga agtgctaggc      1440
     tacaccaaca acaacggtta tccttctcgc gacatgacca aactagtcgc ccagctgtac      1500
     catcctcgaa acgtcgacaa gacgtcatgg aaatctcttc tcatggctaa agtctgcggc      1560
     ttcgcatacg catcctgcta tcaagattcg caagtgatag acctcctacg ctccatttac      1620
     aacaacctgg cttccaaagg cttcaagcct aagtccggcc gcgtgatgcg agatattatc      1680
     ttattcggag aatccgaatt tgaggtcccc actgatcatt tcccaactct caacgatgtg      1740
     accaagtatt tcagacgtcc ttacgtccgc actcaacgcg acgctgactc ttacttcccc      1800
     tcttggcatt tcaatgatgt gttttgatcc gctgatctcg aaagatccaa cctaaaaaat      1860
     tgaaaaaaaa aaaaaaaaaa aatac                                            1885
//