ID   FJ813514; SV 1; linear; genomic RNA; STD; VRL; 1804 BP.
XX
AC   FJ813514;
XX
DT   09-APR-2009 (Rel. 100, Created)
DT   02-NOV-2009 (Rel. 102, Last updated, Version 2)
XX
DE   Potato virus S isolate IdDef-US 12K protein, 7K protein, 34K coat protein,
DE   and 11K protein genes, complete cds.
XX
KW   .
XX
OS   Potato virus S
OC   Viruses; Riboviria; Tymovirales; Betaflexiviridae; Quinvirinae; Carlavirus.
XX
RN   [1]
RP   1-1804
RX   DOI; 10.1007/s00705-009-0486-6.
RX   PUBMED; 19820893.
RA   Lin Y.H., Druffel K.L., Whitworth J., Pavek M.J., Pappu H.R.;
RT   "Molecular characterization of two potato virus S isolates from
RT   late-blight-resistant genotypes of potato (Solanum tuberosum)";
RL   Arch. Virol. 154(11):1861-1863(2009).
XX
RN   [2]
RP   1-1804
RA   Lin Y.H., Druffel K.L., Whitworth J., Pavek M.J., Pappu H.R.;
RT   ;
RL   Submitted (10-MAR-2009) to the INSDC.
RL   Plant Pathology, Washington State University, Pullman, WA 99163, USA
XX
DR   MD5; 129969975e53413195d283ca92cd096d.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1804
FT                   /organism="Potato virus S"
FT                   /host="Solanum tuberosum cv. Defender"
FT                   /isolate="IdDef-US"
FT                   /mol_type="genomic RNA"
FT                   /country="USA"
FT                   /collection_date="May-2008"
FT                   /db_xref="taxon:12169"
FT   CDS             5..331
FT                   /codon_start=1
FT                   /product="12K protein"
FT                   /db_xref="GOA:A4F357"
FT                   /db_xref="InterPro:IPR001896"
FT                   /db_xref="UniProtKB/TrEMBL:A4F357"
FT                   /protein_id="ACO51507.1"
FT                   /translation="MPLTPPPNYTGLYIAAALGVSLAAVVALFTRSTLPIVGDSQHNLP
FT                   HGGRYRDGTKAIDYFKPAKLNSVEPGNHWYAQPWLLVLLLVALICLSGRHAPCCPRCNR
FT                   VHSA"
FT   CDS             295..495
FT                   /codon_start=1
FT                   /product="7K protein"
FT                   /db_xref="GOA:C1KD85"
FT                   /db_xref="InterPro:IPR003411"
FT                   /db_xref="UniProtKB/TrEMBL:C1KD85"
FT                   /protein_id="ACO51508.1"
FT                   /translation="MLSKVQPSAQCLMVFILAFALSWYALRPGNTSCVLLITGESVRLV
FT                   NCELTRDLVEAVATLGPLKHL"
FT   CDS             537..1421
FT                   /codon_start=1
FT                   /product="34K coat protein"
FT                   /db_xref="GOA:C1KD86"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="InterPro:IPR013569"
FT                   /db_xref="UniProtKB/TrEMBL:C1KD86"
FT                   /protein_id="ACO51509.1"
FT                   /translation="MPPKPDPTSSGETPQTVPLAPPPRNVEEHRVGPNQGHGQNEKAML
FT                   EQRLIRLIELMASKRHNSTLSNISFEIGRPSLEPTPEMRRNPENPYSRFSIDELFKMEI
FT                   RSVSNNMANTEQMAQITADIAGLGVPTEHVAGVILKVVIMCASVSSSVYLDPAGTVEFP
FT                   TGAVPLDSIIAIMKNRAGLRKVCRLYAPVVWNYMLVQNRPPSDWQAMGFQWNARFAAFD
FT                   TFDYVTNGAAIQPVEGLIRRPTPEETIAHNAHKSMAIDKSNRNERLANTNVEYTGGMLG
FT                   AEIVRNHRNAINQ"
FT   CDS             1418..1702
FT                   /codon_start=1
FT                   /product="11K protein"
FT                   /db_xref="GOA:C1KD87"
FT                   /db_xref="InterPro:IPR002568"
FT                   /db_xref="UniProtKB/TrEMBL:C1KD87"
FT                   /protein_id="ACO51510.1"
FT                   /translation="MKADRLATLLLCVHRLGYELPVEICVNIISLSAGPISGGRSTYAR
FT                   KRRARSIGRCWRCYRVYPPICNSKCDNRTCRPGISQNYKVVTFIRGWSN"
XX
SQ   Sequence 1804 BP; 481 A; 413 C; 468 G; 442 T; 0 other;
     cctgatgcca cttacaccgc cgcctaacta cacagggtta tacattgctg cagctttggg        60
     ggtgtccctt gccgccgtag tagcattgtt cactaggagt acactaccaa ttgttgggga       120
     ttcgcagcac aacctcccac acggggggcg gtatcgcgac ggcactaaag ctattgatta       180
     ctttaaaccc gcgaagttga attctgttga gcctggtaat cactggtacg ctcaaccttg       240
     gctgcttgtt ttacttctag ttgcgctcat ctgcttatca gggcgtcatg ctccatgctg       300
     tccaaggtgc aaccgagtgc acagtgctta atggttttca tcttggcatt cgcgctaagt       360
     tggtatgcgc tcaggccagg aaatacaagc tgcgttctac tcatcactgg ggaatcagtc       420
     cggctagtca attgcgagct cacaagagat ttagtggaag ccgtagcaac attggggccg       480
     ttgaagcacc tttaggttca caggtaagag ttcgaagaaa ctgtcccaca gagaaaatgc       540
     cgcccaaacc ggatccgaca agctcaggag agacaccaca aactgtgccg cttgcgccgc       600
     cgcccaggaa cgtagaggag catagagttg gcccaaatca agggcacggg cagaatgaaa       660
     aggctatgct ggagcaaagg ctcatcaggt tgattgaact catggcctcg aaaaggcaca       720
     attctacatt gagcaacatc tcttttgaaa taggtaggcc ctcacttgag ccaacccctg       780
     aaatgcggag gaatccggag aacccatact cgcggttttc aatagatgag ctgttcaaga       840
     tggaaatccg atctgtgtcc aacaacatgg cgaacaccga gcaaatggca caaatcactg       900
     ctgacatcgc tggacttggg gtccccactg aacatgttgc aggggtcata ctgaaagtgg       960
     tgatcatgtg tgcaagcgtg agtagctctg tttatctaga tccagcaggg actgtggagt      1020
     tcccgacagg cgcagtgccc ttggactcga tcattgcaat tatgaagaat cgcgcgggat      1080
     tgaggaaagt gtgcaggctg tatgctccag tcgtgtggaa ttacatgcta gtccagaata      1140
     ggccaccttc ggattggcag gctatgggat tccaatggaa tgcacgcttc gccgcatttg      1200
     acacattcga ttatgtgact aatggggctg caatccagcc cgtagagggg ctcatacgta      1260
     ggcccacgcc tgaggaaaca atagctcaca atgcccacaa gagtatggca attgacaagt      1320
     cgaacagaaa tgagcggttg gccaacacta atgttgagta cactggaggg atgcttggcg      1380
     ctgagattgt gcgcaatcac cgtaatgcga tcaaccaatg aaggcagacc gtttagccac      1440
     gttgttattg tgtgtccatc gactgggata tgagttgcca gttgaaattt gtgttaatat      1500
     aataagccta agcgcaggtc caatttctgg gggtcgttcc acttacgctc gtaagcggag      1560
     ggcccgcagc attgggcgat gctggcgatg ttatcgtgtc tatccaccta tttgtaattc      1620
     taagtgtgat aatagaacat gccgtccagg cattagtcaa aattataaag tagtgacttt      1680
     cattcggggt tggagtaact gaggtgatac cacccatggt gcaaagtcag agtttcgcat      1740
     aaaacttaaa taatatataa gtgtgcaact ataaagaaaa tatgttttta aaatatttta      1800
     gcat                                                                   1804
//